EnhancerDB
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  3. vista29376[chr19:40447509-40447978]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29376[chr19:40447509-40447978]
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Tissue distribution of vista29376
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Transcription factor that possibly regulate vista29376[chr19:40447509-40447978]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 40447658 40448033 RUNX3 UCSC Txn Factor no Conserved 108408750
chr19 40447664 40448072 RELA UCSC Txn Factor no Conserved 108408752
chr19 40447515 40447521 GATA3 JASPAR yes 70845971
chr19 40447515 40447521 GATA3 JASPAR yes 113315845
chr19 40447545 40447566 IRF1 JASPAR yes 70845972
chr19 40447545 40447566 IRF1 JASPAR yes 113315846
chr19 40447551 40447566 FOXP1 JASPAR yes 70845973
chr19 40447551 40447566 FOXP1 JASPAR yes 113315847
chr19 40447551 40447572 IRF1 JASPAR yes 70845974
chr19 40447551 40447572 IRF1 JASPAR yes 113315848
chr19 40447552 40447567 FOXP1 JASPAR yes 70845975
chr19 40447552 40447567 FOXP1 JASPAR yes 113315849
chr19 40447553 40447568 FOXP1 JASPAR yes 70845976
chr19 40447553 40447568 FOXP1 JASPAR yes 113315850
chr19 40447554 40447569 FOXP1 JASPAR yes 70845977
chr19 40447554 40447569 FOXP1 JASPAR yes 113315851
chr19 40447555 40447570 FOXP1 JASPAR yes 70845978
chr19 40447555 40447570 FOXP1 JASPAR yes 113315852
chr19 40447556 40447571 FOXP1 JASPAR yes 70845979
chr19 40447556 40447571 FOXP1 JASPAR yes 113315853
chr19 40447556 40447577 IRF1 JASPAR yes 70845980
chr19 40447556 40447577 IRF1 JASPAR yes 113315854
chr19 40447557 40447572 FOXP1 JASPAR yes 70845981
chr19 40447557 40447572 FOXP1 JASPAR yes 113315855
chr19 40447560 40447575 PRDM1 JASPAR yes 70845982
chr19 40447560 40447575 STAT2 JASPAR yes 70845983
chr19 40447560 40447575 PRDM1 JASPAR yes 113315856
chr19 40447560 40447575 STAT2 JASPAR yes 113315857
chr19 40447572 40447587 STAT2 JASPAR yes 70845984
chr19 40447572 40447587 STAT2 JASPAR yes 113315858
chr19 40447574 40447584 NFATC3 JASPAR yes 70845985
chr19 40447574 40447584 NFATC3 JASPAR yes 113315859
chr19 40447574 40447585 ETV2 JASPAR yes 70845986
chr19 40447574 40447585 ETV2 JASPAR yes 113315860
chr19 40447576 40447582 ETS1 JASPAR yes 70845987
chr19 40447576 40447582 ETS1 JASPAR yes 113315861
chr19 40447597 40447601 ESR1 TRANSFAC yes 70845988
chr19 40447597 40447601 ESR1 TRANSFAC yes 113315862
chr19 40447599 40447618 REST JASPAR yes 70845989
chr19 40447599 40447618 REST JASPAR yes 113315863
chr19 40447603 40447608 MYC TRANSFAC yes 70845990
chr19 40447603 40447608 MYC TRANSFAC yes 113315864
chr19 40447604 40447625 IRF1 JASPAR yes 70845991
chr19 40447604 40447625 IRF1 JASPAR yes 113315865
chr19 40447608 40447623 PRDM1 JASPAR yes 70845992
chr19 40447608 40447623 PRDM1 JASPAR yes 113315866
chr19 40447611 40447616 ETS2 TRANSFAC yes 70845993
chr19 40447611 40447616 ETS2 TRANSFAC yes 113315867
chr19 40447630 40447636 MZF1 JASPAR yes 70845994
chr19 40447630 40447636 MZF1 JASPAR yes 113315868
chr19 40447630 40447645 ZIC4 JASPAR yes 70845995
chr19 40447630 40447645 ZIC4 JASPAR yes 113315869
chr19 40447652 40447656 NFE TRANSFAC yes 70845996
chr19 40447652 40447656 NFE TRANSFAC yes 113315870
chr19 40447662 40447677 HNF4G JASPAR yes 70845997
chr19 40447662 40447677 HNF4G JASPAR yes 113315871
chr19 40447664 40447668 H4TF2 TRANSFAC yes 70845998
chr19 40447664 40447668 H4TF2 TRANSFAC yes 113315872
chr19 40447684 40447692 MEIS2 JASPAR yes 70845999
chr19 40447684 40447692 MEIS3 JASPAR yes 70846000
chr19 40447684 40447692 MEIS2 JASPAR yes 113315873
chr19 40447684 40447692 MEIS3 JASPAR yes 113315874
chr19 40447685 40447689 NFE TRANSFAC yes 70846001
chr19 40447685 40447689 NFE TRANSFAC yes 113315875
chr19 40447690 40447700 TFEB JASPAR yes 70846002
chr19 40447690 40447700 TFEC JASPAR yes 70846003
chr19 40447690 40447700 TFEB JASPAR yes 113315876
chr19 40447690 40447700 TFEC JASPAR yes 113315877
chr19 40447699 40447702 MYB TRANSFAC yes 70846004
chr19 40447699 40447702 MYB TRANSFAC yes 113315878
chr19 40447707 40447712 H4TF1 TRANSFAC yes 70846005
chr19 40447707 40447712 H4TF1 TRANSFAC yes 113315879
chr19 40447712 40447723 E2F1 JASPAR yes 70846006
chr19 40447712 40447723 E2F1 JASPAR yes 113315880
chr19 40447722 40447731 SOX9 JASPAR yes 70846007
chr19 40447722 40447731 SOX9 JASPAR yes 113315881
chr19 40447738 40447751 POU2F2 JASPAR yes 70846008
chr19 40447738 40447751 POU2F2 JASPAR yes 113315882
chr19 40447761 40447772 FOXB1 JASPAR yes 70846009
chr19 40447761 40447772 FOXC1 JASPAR yes 70846010
chr19 40447761 40447772 FOXB1 JASPAR yes 113315883
chr19 40447761 40447772 FOXC1 JASPAR yes 113315884
chr19 40447764 40447770 NFIC JASPAR yes 70846011
chr19 40447764 40447770 NFIC JASPAR yes 113315885
chr19 40447768 40447772 YY1 TRANSFAC yes 70846012
chr19 40447768 40447772 YY1 TRANSFAC yes 113315886
chr19 40447804 40447809 MYB TRANSFAC yes 70846013
chr19 40447804 40447809 MYB TRANSFAC yes 113315887
chr19 40447809 40447822 POU3F3 JASPAR yes 70846014
chr19 40447809 40447822 POU3F3 JASPAR yes 113315888
chr19 40447809 40447823 POU1F1 JASPAR yes 70846015
chr19 40447809 40447823 POU1F1 JASPAR yes 113315889
chr19 40447810 40447822 POU3F2 JASPAR yes 70846016
chr19 40447810 40447822 POU3F2 JASPAR yes 113315890
chr19 40447811 40447822 PROP1 JASPAR yes 70846017
chr19 40447811 40447822 PROP1 JASPAR yes 113315891
chr19 40447812 40447817 ETS2 TRANSFAC yes 70846018
chr19 40447812 40447817 ETS2 TRANSFAC yes 113315892
chr19 40447812 40447820 FEV JASPAR yes 70846019
chr19 40447812 40447820 FEV JASPAR yes 113315893
chr19 40447827 40447842 STAT2 JASPAR yes 70846020
chr19 40447827 40447842 STAT2 JASPAR yes 113315894
chr19 40447843 40447858 RFX5 JASPAR yes 70846021
chr19 40447843 40447858 RFX5 JASPAR yes 113315895
chr19 40447845 40447860 RUNX2 JASPAR yes 70846022
chr19 40447845 40447860 RUNX2 JASPAR yes 113315896
chr19 40447861 40447866 TFAP2A TRANSFAC yes 70846023
chr19 40447861 40447866 TFAP2A TRANSFAC yes 113315897
chr19 40447861 40447867 MZF1 JASPAR yes 70846024
chr19 40447861 40447867 MZF1 JASPAR yes 113315898
chr19 40447861 40447874 NFKB1 JASPAR yes 70846025
chr19 40447861 40447874 NFKB2 JASPAR yes 70846026
chr19 40447861 40447874 NFKB1 JASPAR yes 113315899
chr19 40447861 40447874 NFKB2 JASPAR yes 113315900
chr19 40447862 40447873 NFKB1 JASPAR yes 70846027
chr19 40447862 40447873 NFKB1 JASPAR yes 113315901
chr19 40447863 40447868 ETS2 TRANSFAC yes 70846028
chr19 40447863 40447868 ETS2 TRANSFAC yes 113315902
chr19 40447863 40447873 NFKB1 JASPAR yes 70846029
chr19 40447863 40447873 RELA JASPAR yes 70846030
chr19 40447863 40447873 NFKB1 JASPAR yes 113315903
chr19 40447863 40447873 RELA JASPAR yes 113315904
chr19 40447863 40447874 NFKB1 JASPAR yes 70846031
chr19 40447863 40447874 NFKB1 JASPAR yes 113315905
chr19 40447881 40447895 SPI1 JASPAR yes 70846032
chr19 40447881 40447895 SPI1 JASPAR yes 113315906
chr19 40447888 40447903 RUNX2 JASPAR yes 70846033
chr19 40447888 40447903 RUNX2 JASPAR yes 113315907
chr19 40447891 40447902 RUNX1 JASPAR yes 70846034
chr19 40447891 40447902 RUNX1 JASPAR yes 113315908
chr19 40447892 40447902 RUNX3 JASPAR yes 70846035
chr19 40447892 40447902 RUNX3 JASPAR yes 113315909
chr19 40447893 40447902 RUNX2 JASPAR yes 70846036
chr19 40447893 40447902 RUNX2 JASPAR yes 113315910
chr19 40447918 40447936 NFYA JASPAR yes 70846037
chr19 40447918 40447936 NFYA JASPAR yes 113315911
chr19 40447948 40447969 IRF1 JASPAR yes 70846038
chr19 40447948 40447969 IRF1 JASPAR yes 113315912
chr19 40447952 40447967 STAT2 JASPAR yes 70846039
chr19 40447952 40447967 STAT2 JASPAR yes 113315913
chr19 40447968 40447978 TEAD1 JASPAR yes 70846040
chr19 40447968 40447978 TEAD4 JASPAR yes 70846041
chr19 40447968 40447978 TEAD1 JASPAR yes 113315914
chr19 40447968 40447978 TEAD4 JASPAR yes 113315915
chr19 40447972 40447990 MAFF JASPAR yes 70846042
chr19 40447972 40447990 MAFF JASPAR yes 113315916
chr19 40447972 40447993 IRF1 JASPAR yes 70846043
chr19 40447972 40447993 IRF1 JASPAR yes 113315917
chr19 40447973 40447988 MAFK JASPAR yes 70846044
chr19 40447973 40447988 MAFK JASPAR yes 113315918
chr19 40447977 40447988 NRL JASPAR yes 70846045
chr19 40447977 40447988 NRL JASPAR yes 113315919
SNP sites on vista29376[chr19:40447509-40447978]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29376[chr19:40447509-40447978]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 40353963 40440533 - FCGBP ENSG00000090920.9 40440533 0.96 1.0 17534 93024
chr19 40476912 40487348 + PSMC4 ENSG00000013275.3 40476912 0.55 1.0 17535 71066
chr19 40490041 40523514 + ZNF546 ENSG00000187187.9 40490041 0.73 0.85 17536 57937
Expression level of Genes
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miRNAs possibly regulated by vista29376[chr19:40447509-40447978]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results