EnhancerDB
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  3. vista29377[chr19:40459260-40459714]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29377[chr19:40459260-40459714]
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Tissue distribution of vista29377
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Transcription factor that possibly regulate vista29377[chr19:40459260-40459714]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 40459332 40459738 RELA UCSC Txn Factor no Conserved 108408763
chr19 40459385 40459769 RUNX3 UCSC Txn Factor no Conserved 108408768
chr19 40459405 40459725 NFYB UCSC Txn Factor no Conserved 108408771
chr19 40459448 40459742 ATF2 UCSC Txn Factor no Conserved 108408777
chr19 40459500 40459728 SPI1 UCSC Txn Factor no Conserved 108408781
chr19 40459261 40459276 PRDM1 JASPAR yes 70846046
chr19 40459261 40459276 PRDM1 JASPAR yes 113317321
chr19 40459264 40459269 ETS2 TRANSFAC yes 70846047
chr19 40459264 40459269 ETS2 TRANSFAC yes 113317322
chr19 40459273 40459278 SP1 TRANSFAC yes 70846048
chr19 40459273 40459278 SP1 TRANSFAC yes 113317323
chr19 40459292 40459312 ESR1 JASPAR yes 70846049
chr19 40459292 40459312 ESR1 JASPAR yes 113317324
chr19 40459305 40459309 NFE TRANSFAC yes 70846050
chr19 40459305 40459309 NFE TRANSFAC yes 113317325
chr19 40459308 40459320 SRF JASPAR yes 70846051
chr19 40459308 40459320 SRF JASPAR yes 113317326
chr19 40459315 40459320 SP1 TRANSFAC yes 70846052
chr19 40459315 40459320 SP1 TRANSFAC yes 113317327
chr19 40459330 40459335 ATF1 TRANSFAC yes 70846053
chr19 40459330 40459335 ATF1 TRANSFAC yes 113317328
chr19 40459337 40459345 MEIS2 JASPAR yes 70846054
chr19 40459337 40459345 MEIS3 JASPAR yes 70846055
chr19 40459337 40459345 MEIS2 JASPAR yes 113317329
chr19 40459337 40459345 MEIS3 JASPAR yes 113317330
chr19 40459338 40459342 NFE TRANSFAC yes 70846056
chr19 40459338 40459342 NFE TRANSFAC yes 113317331
chr19 40459343 40459348 MYB TRANSFAC yes 70846057
chr19 40459343 40459348 MYB TRANSFAC yes 113317332
chr19 40459360 40459365 H4TF1 TRANSFAC yes 70846058
chr19 40459360 40459365 H4TF1 TRANSFAC yes 113317333
chr19 40459392 40459405 POU2F2 JASPAR yes 70846059
chr19 40459392 40459405 POU2F2 JASPAR yes 113317334
chr19 40459411 40459415 TEAD2 TRANSFAC yes 70846060
chr19 40459411 40459415 TEAD2 TRANSFAC yes 113317335
chr19 40459413 40459416 MYB TRANSFAC yes 70846061
chr19 40459413 40459416 MYB TRANSFAC yes 113317336
chr19 40459414 40459428 POU1F1 JASPAR yes 70846062
chr19 40459414 40459428 POU1F1 JASPAR yes 113317337
chr19 40459415 40459427 POU3F1 JASPAR yes 70846063
chr19 40459415 40459427 POU3F2 JASPAR yes 70846064
chr19 40459415 40459427 POU3F1 JASPAR yes 113317338
chr19 40459415 40459427 POU3F2 JASPAR yes 113317339
chr19 40459415 40459428 POU3F3 JASPAR yes 70846065
chr19 40459415 40459428 POU3F3 JASPAR yes 113317340
chr19 40459416 40459420 YY1 TRANSFAC yes 70846066
chr19 40459416 40459420 YY1 TRANSFAC yes 113317341
chr19 40459416 40459428 POU2F1 JASPAR yes 70846067
chr19 40459416 40459428 POU2F1 JASPAR yes 113317342
chr19 40459417 40459426 POU3F4 JASPAR yes 70846068
chr19 40459417 40459426 POU5F1B JASPAR yes 70846069
chr19 40459417 40459426 POU3F4 JASPAR yes 113317343
chr19 40459417 40459426 POU5F1B JASPAR yes 113317344
chr19 40459419 40459435 POU4F2 JASPAR yes 70846070
chr19 40459419 40459435 POU4F2 JASPAR yes 113317345
chr19 40459422 40459426 YY1 TRANSFAC yes 70846071
chr19 40459422 40459426 YY1 TRANSFAC yes 113317346
chr19 40459439 40459443 LFA1 TRANSFAC yes 70846072
chr19 40459439 40459443 LFA1 TRANSFAC yes 113317347
chr19 40459454 40459458 YY1 TRANSFAC yes 70846073
chr19 40459454 40459458 YY1 TRANSFAC yes 113317348
chr19 40459460 40459475 PRDM1 JASPAR yes 70846074
chr19 40459460 40459475 PRDM1 JASPAR yes 113317349
chr19 40459463 40459468 ETS2 TRANSFAC yes 70846075
chr19 40459463 40459468 ETS2 TRANSFAC yes 113317350
chr19 40459498 40459502 H4TF2 TRANSFAC yes 70846076
chr19 40459498 40459502 H4TF2 TRANSFAC yes 113317351
chr19 40459498 40459512 EBF1 JASPAR yes 70846077
chr19 40459498 40459512 EBF1 JASPAR yes 113317352
chr19 40459500 40459511 EBF1 JASPAR yes 70846078
chr19 40459500 40459511 EBF1 JASPAR yes 113317353
chr19 40459504 40459509 TFAP2A TRANSFAC yes 70846079
chr19 40459504 40459509 TFAP2A TRANSFAC yes 113317354
chr19 40459504 40459510 MZF1 JASPAR yes 70846080
chr19 40459504 40459510 MZF1 JASPAR yes 113317355
chr19 40459504 40459517 NFKB1 JASPAR yes 70846081
chr19 40459504 40459517 NFKB2 JASPAR yes 70846082
chr19 40459504 40459517 NFKB1 JASPAR yes 113317356
chr19 40459504 40459517 NFKB2 JASPAR yes 113317357
chr19 40459505 40459516 NFKB1 JASPAR yes 70846083
chr19 40459505 40459516 NFKB1 JASPAR yes 113317358
chr19 40459506 40459511 ETS2 TRANSFAC yes 70846084
chr19 40459506 40459511 ETS2 TRANSFAC yes 113317359
chr19 40459506 40459516 NFKB1 JASPAR yes 70846085
chr19 40459506 40459516 RELA JASPAR yes 70846086
chr19 40459506 40459516 NFKB1 JASPAR yes 113317360
chr19 40459506 40459516 RELA JASPAR yes 113317361
chr19 40459506 40459517 NFKB1 JASPAR yes 70846087
chr19 40459506 40459517 NFKB1 JASPAR yes 113317362
chr19 40459524 40459538 SPI1 JASPAR yes 70846088
chr19 40459524 40459538 SPI1 JASPAR yes 113317363
chr19 40459531 40459546 RUNX2 JASPAR yes 70846089
chr19 40459531 40459546 RUNX2 JASPAR yes 113317364
chr19 40459534 40459545 RUNX1 JASPAR yes 70846090
chr19 40459534 40459545 RUNX1 JASPAR yes 113317365
chr19 40459535 40459545 RUNX3 JASPAR yes 70846091
chr19 40459535 40459545 RUNX3 JASPAR yes 113317366
chr19 40459536 40459545 RUNX2 JASPAR yes 70846092
chr19 40459536 40459545 RUNX2 JASPAR yes 113317367
chr19 40459555 40459569 NR2F1 JASPAR yes 70846093
chr19 40459555 40459569 NR2F1 JASPAR yes 113317368
chr19 40459555 40459570 LEF1 JASPAR yes 70846094
chr19 40459555 40459570 LEF1 JASPAR yes 113317369
chr19 40459556 40459570 TCF7L2 JASPAR yes 70846095
chr19 40459556 40459570 TCF7L2 JASPAR yes 113317370
chr19 40459558 40459565 TCF4 TRANSFAC yes 70846096
chr19 40459558 40459565 TCF4 TRANSFAC yes 113317371
chr19 40459559 40459565 LEF1 TRANSFAC yes 70846097
chr19 40459559 40459565 TCF4 TRANSFAC yes 70846098
chr19 40459559 40459565 LEF1 TRANSFAC yes 113317372
chr19 40459559 40459565 TCF4 TRANSFAC yes 113317373
chr19 40459561 40459579 NFYA JASPAR yes 70846099
chr19 40459561 40459579 NFYA JASPAR yes 113317374
chr19 40459564 40459580 NFYA JASPAR yes 70846100
chr19 40459564 40459580 NFYA JASPAR yes 113317375
chr19 40459566 40459576 EN2 JASPAR yes 70846101
chr19 40459566 40459576 EN2 JASPAR yes 113317376
chr19 40459567 40459582 NFYB JASPAR yes 70846102
chr19 40459567 40459582 NFYB JASPAR yes 113317377
chr19 40459569 40459574 NFY TRANSFAC yes 70846103
chr19 40459569 40459574 NFY TRANSFAC yes 113317378
chr19 40459577 40459587 GSC2 JASPAR yes 70846104
chr19 40459577 40459587 GSC JASPAR yes 70846105
chr19 40459577 40459587 GSC2 JASPAR yes 113317379
chr19 40459577 40459587 GSC JASPAR yes 113317380
chr19 40459599 40459605 JUN TRANSFAC yes 70846106
chr19 40459599 40459605 JUN TRANSFAC yes 113317381
chr19 40459606 40459616 REL JASPAR yes 70846107
chr19 40459606 40459616 REL JASPAR yes 113317382
chr19 40459631 40459645 TCF7L2 JASPAR yes 70846108
chr19 40459631 40459645 TCF7L2 JASPAR yes 113317383
chr19 40459633 40459654 IRF1 JASPAR yes 70846109
chr19 40459633 40459654 IRF1 JASPAR yes 113317384
chr19 40459637 40459651 SPI1 JASPAR yes 70846110
chr19 40459637 40459651 SPIC JASPAR yes 70846111
chr19 40459637 40459651 SPI1 JASPAR yes 113317385
chr19 40459637 40459651 SPIC JASPAR yes 113317386
chr19 40459638 40459651 ELF1 JASPAR yes 70846112
chr19 40459638 40459651 ELF1 JASPAR yes 113317387
chr19 40459639 40459651 EHF JASPAR yes 70846113
chr19 40459639 40459651 ELF1 JASPAR yes 70846114
chr19 40459639 40459651 ELF4 JASPAR yes 70846115
chr19 40459639 40459651 EHF JASPAR yes 113317388
chr19 40459639 40459651 ELF1 JASPAR yes 113317389
chr19 40459639 40459651 ELF4 JASPAR yes 113317390
chr19 40459639 40459652 ELF3 JASPAR yes 70846116
chr19 40459639 40459652 ELF3 JASPAR yes 113317391
chr19 40459640 40459651 ELF5 JASPAR yes 70846117
chr19 40459640 40459651 ETV2 JASPAR yes 70846118
chr19 40459640 40459651 ELF5 JASPAR yes 113317392
chr19 40459640 40459651 ETV2 JASPAR yes 113317393
chr19 40459641 40459651 ERF JASPAR yes 70846119
chr19 40459641 40459651 ERG JASPAR yes 70846120
chr19 40459641 40459651 ETS1 JASPAR yes 70846121
chr19 40459641 40459651 ETV3 JASPAR yes 70846122
chr19 40459641 40459651 FEV JASPAR yes 70846123
chr19 40459641 40459651 FLI1 JASPAR yes 70846124
chr19 40459641 40459651 GABPA JASPAR yes 70846125
chr19 40459641 40459651 ERF JASPAR yes 113317394
chr19 40459641 40459651 ERG JASPAR yes 113317395
chr19 40459641 40459651 ETS1 JASPAR yes 113317396
chr19 40459641 40459651 ETV3 JASPAR yes 113317397
chr19 40459641 40459651 FEV JASPAR yes 113317398
chr19 40459641 40459651 FLI1 JASPAR yes 113317399
chr19 40459641 40459651 GABPA JASPAR yes 113317400
chr19 40459641 40459652 ELK4 JASPAR yes 70846126
chr19 40459641 40459652 FLI1 JASPAR yes 70846127
chr19 40459641 40459652 ELK4 JASPAR yes 113317401
chr19 40459641 40459652 FLI1 JASPAR yes 113317402
chr19 40459642 40459650 EHF JASPAR yes 70846128
chr19 40459642 40459650 FEV JASPAR yes 70846129
chr19 40459642 40459650 EHF JASPAR yes 113317403
chr19 40459642 40459650 FEV JASPAR yes 113317404
chr19 40459643 40459650 SPI1 JASPAR yes 70846130
chr19 40459643 40459650 SPI1 JASPAR yes 113317405
chr19 40459661 40459669 MEIS3 JASPAR yes 70846131
chr19 40459661 40459669 MEIS3 JASPAR yes 113317406
chr19 40459662 40459666 NFE TRANSFAC yes 70846132
chr19 40459662 40459666 NFE TRANSFAC yes 113317407
chr19 40459678 40459693 HNF1A JASPAR yes 70846133
chr19 40459678 40459693 HNF1A JASPAR yes 113317408
chr19 40459679 40459692 HNF1B JASPAR yes 70846134
chr19 40459679 40459692 HNF1B JASPAR yes 113317409
chr19 40459680 40459692 FOXC2 JASPAR yes 70846135
chr19 40459680 40459692 MEF2D JASPAR yes 70846136
chr19 40459680 40459692 FOXC2 JASPAR yes 113317410
chr19 40459680 40459692 MEF2D JASPAR yes 113317411
chr19 40459681 40459693 FOXI1 JASPAR yes 70846137
chr19 40459681 40459693 FOXI1 JASPAR yes 113317412
chr19 40459692 40459708 POU4F2 JASPAR yes 70846138
chr19 40459692 40459708 POU4F2 JASPAR yes 113317413
chr19 40459695 40459706 CDX2 JASPAR yes 70846139
chr19 40459695 40459706 CDX2 JASPAR yes 113317414
chr19 40459699 40459713 POU1F1 JASPAR yes 70846140
chr19 40459699 40459713 POU1F1 JASPAR yes 113317415
chr19 40459700 40459712 POU3F1 JASPAR yes 70846141
chr19 40459700 40459712 POU3F2 JASPAR yes 70846142
chr19 40459700 40459712 POU3F1 JASPAR yes 113317416
chr19 40459700 40459712 POU3F2 JASPAR yes 113317417
chr19 40459700 40459713 POU3F3 JASPAR yes 70846143
chr19 40459700 40459713 POU3F3 JASPAR yes 113317418
chr19 40459701 40459705 YY1 TRANSFAC yes 70846144
chr19 40459701 40459705 YY1 TRANSFAC yes 113317419
chr19 40459701 40459713 POU2F1 JASPAR yes 70846145
chr19 40459701 40459713 POU2F1 JASPAR yes 113317420
chr19 40459702 40459711 POU3F4 JASPAR yes 70846146
chr19 40459702 40459711 POU5F1B JASPAR yes 70846147
chr19 40459702 40459711 POU3F4 JASPAR yes 113317421
chr19 40459702 40459711 POU5F1B JASPAR yes 113317422
chr19 40459703 40459717 POU4F1 JASPAR yes 70846148
chr19 40459703 40459717 POU4F1 JASPAR yes 113317423
chr19 40459704 40459718 POU4F1 JASPAR yes 70846149
chr19 40459704 40459718 POU4F1 JASPAR yes 113317424
chr19 40459704 40459720 POU4F2 JASPAR yes 70846150
chr19 40459704 40459720 POU4F3 JASPAR yes 70846151
chr19 40459704 40459720 POU4F2 JASPAR yes 113317425
chr19 40459704 40459720 POU4F3 JASPAR yes 113317426
chr19 40459714 40459718 YY1 TRANSFAC yes 70846152
chr19 40459714 40459718 YY1 TRANSFAC yes 113317427
SNP sites on vista29377[chr19:40459260-40459714]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29377[chr19:40459260-40459714]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 40353963 40440533 - FCGBP ENSG00000090920.9 40440533 0.96 1.0 17534 81273
chr19 40476912 40487348 + PSMC4 ENSG00000013275.3 40476912 0.55 1.0 17535 82802
chr19 40490041 40523514 + ZNF546 ENSG00000187187.9 40490041 0.73 0.85 17536 69673
Expression level of Genes
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miRNAs possibly regulated by vista29377[chr19:40459260-40459714]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results