EnhancerDB
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  3. vista29378[chr19:40466097-40466407]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29378[chr19:40466097-40466407]
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Tissue distribution of vista29378
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Transcription factor that possibly regulate vista29378[chr19:40466097-40466407]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 40466087 40466100 ATF4 JASPAR yes 70846153
chr19 40466087 40466100 ATF4 JASPAR yes 113318264
chr19 40466088 40466101 JUN JASPAR yes 70846154
chr19 40466088 40466101 JUN JASPAR yes 113318265
chr19 40466109 40466124 AR JASPAR yes 70846155
chr19 40466109 40466124 AR JASPAR yes 113318266
chr19 40466116 40466120 NFE TRANSFAC yes 70846156
chr19 40466116 40466120 NFE TRANSFAC yes 113318267
chr19 40466130 40466135 GATA2 JASPAR yes 70846157
chr19 40466130 40466135 GATA2 JASPAR yes 113318268
chr19 40466130 40466151 ZNF263 JASPAR yes 70846158
chr19 40466130 40466151 ZNF263 JASPAR yes 113318269
chr19 40466133 40466143 ZNF740 JASPAR yes 70846159
chr19 40466133 40466143 ZNF740 JASPAR yes 113318270
chr19 40466136 40466142 MZF1 JASPAR yes 70846160
chr19 40466136 40466142 MZF1 JASPAR yes 113318271
chr19 40466142 40466159 BCL6B JASPAR yes 70846161
chr19 40466142 40466159 BCL6B JASPAR yes 113318272
chr19 40466143 40466155 INSM1 JASPAR yes 70846162
chr19 40466143 40466155 INSM1 JASPAR yes 113318273
chr19 40466156 40466169 NR2F1 JASPAR yes 70846163
chr19 40466156 40466169 NR2F1 JASPAR yes 113318274
chr19 40466159 40466167 NR4A2 JASPAR yes 70846164
chr19 40466159 40466167 NR4A2 JASPAR yes 113318275
chr19 40466160 40466170 RORA JASPAR yes 70846165
chr19 40466160 40466170 RORA JASPAR yes 113318276
chr19 40466173 40466188 LEF1 JASPAR yes 70846166
chr19 40466173 40466188 LEF1 JASPAR yes 113318277
chr19 40466174 40466179 ETS2 TRANSFAC yes 70846167
chr19 40466174 40466179 ETS2 TRANSFAC yes 113318278
chr19 40466185 40466200 FOXP1 JASPAR yes 70846168
chr19 40466185 40466200 FOXP1 JASPAR yes 113318279
chr19 40466186 40466197 FOXP2 JASPAR yes 70846169
chr19 40466186 40466197 FOXP2 JASPAR yes 113318280
chr19 40466188 40466196 FOXO3 JASPAR yes 70846170
chr19 40466188 40466196 FOXO3 JASPAR yes 113318281
chr19 40466190 40466201 STAT3 JASPAR yes 70846171
chr19 40466190 40466201 STAT3 JASPAR yes 113318282
chr19 40466207 40466220 DUXA JASPAR yes 70846172
chr19 40466207 40466220 DUXA JASPAR yes 113318283
chr19 40466208 40466219 DUX4 JASPAR yes 70846173
chr19 40466208 40466219 DUX4 JASPAR yes 113318284
chr19 40466208 40466229 IRF1 JASPAR yes 70846174
chr19 40466208 40466229 IRF1 JASPAR yes 113318285
chr19 40466210 40466225 IRF9 JASPAR yes 70846175
chr19 40466210 40466225 IRF9 JASPAR yes 113318286
chr19 40466212 40466226 SPIC JASPAR yes 70846176
chr19 40466212 40466226 SPIC JASPAR yes 113318287
chr19 40466212 40466227 STAT2 JASPAR yes 70846177
chr19 40466212 40466227 STAT2 JASPAR yes 113318288
chr19 40466218 40466232 RORA JASPAR yes 70846178
chr19 40466218 40466232 RORA JASPAR yes 113318289
chr19 40466225 40466230 ATF1 TRANSFAC yes 70846179
chr19 40466225 40466230 ATF1 TRANSFAC yes 113318290
chr19 40466249 40466253 YY1 TRANSFAC yes 70846180
chr19 40466249 40466253 YY1 TRANSFAC yes 113318291
chr19 40466257 40466267 NFATC3 JASPAR yes 70846181
chr19 40466257 40466267 NFATC3 JASPAR yes 113318292
chr19 40466259 40466266 NFATC2 JASPAR yes 70846182
chr19 40466259 40466266 NFATC2 JASPAR yes 113318293
chr19 40466264 40466274 NFATC3 JASPAR yes 70846183
chr19 40466264 40466274 NFATC3 JASPAR yes 113318294
chr19 40466269 40466278 NKX2-8 JASPAR yes 70846184
chr19 40466269 40466278 NKX2-8 JASPAR yes 113318295
chr19 40466279 40466294 SCRT1 JASPAR yes 70846185
chr19 40466279 40466294 SCRT1 JASPAR yes 113318296
chr19 40466298 40466319 ZNF263 JASPAR yes 70846186
chr19 40466298 40466319 ZNF263 JASPAR yes 113318297
chr19 40466315 40466336 ZNF263 JASPAR yes 70846187
chr19 40466315 40466336 ZNF263 JASPAR yes 113318298
chr19 40466318 40466322 H1TF2 TRANSFAC yes 70846188
chr19 40466318 40466322 NFE TRANSFAC yes 70846189
chr19 40466318 40466322 SRF TRANSFAC yes 70846190
chr19 40466318 40466322 H1TF2 TRANSFAC yes 113318299
chr19 40466318 40466322 NFE TRANSFAC yes 113318300
chr19 40466318 40466322 SRF TRANSFAC yes 113318301
chr19 40466326 40466332 SP1 TRANSFAC yes 70846191
chr19 40466326 40466332 SP1 TRANSFAC yes 113318302
chr19 40466326 40466336 SP1 JASPAR yes 70846192
chr19 40466326 40466336 SP1 JASPAR yes 113318303
chr19 40466336 40466344 FOXL1 JASPAR yes 70846193
chr19 40466336 40466344 FOXL1 JASPAR yes 113318304
chr19 40466338 40466348 SMAD3 JASPAR yes 70846194
chr19 40466338 40466348 SMAD3 JASPAR yes 113318305
chr19 40466360 40466373 ATF4 JASPAR yes 70846195
chr19 40466360 40466373 ATF4 JASPAR yes 113318306
chr19 40466363 40466369 YY1 JASPAR yes 70846196
chr19 40466363 40466369 YY1 JASPAR yes 113318307
chr19 40466397 40466418 IRF1 JASPAR yes 70846197
chr19 40466397 40466418 IRF1 JASPAR yes 113318308
chr19 40466399 40466414 STAT2 JASPAR yes 70846198
chr19 40466399 40466414 STAT2 JASPAR yes 113318309
chr19 40466400 40466414 SPI1 JASPAR yes 70846199
chr19 40466400 40466414 SPI1 JASPAR yes 113318310
chr19 40466403 40466410 SPIB JASPAR yes 70846200
chr19 40466403 40466410 SPIB JASPAR yes 113318311
chr19 40466403 40466424 ZNF263 JASPAR yes 70846201
chr19 40466403 40466424 ZNF263 JASPAR yes 113318312
chr19 40466404 40466425 ZNF263 JASPAR yes 70846202
chr19 40466404 40466425 ZNF263 JASPAR yes 113318313
chr19 40466406 40466421 FOXP1 JASPAR yes 70846203
chr19 40466406 40466421 FOXP1 JASPAR yes 113318314
SNP sites on vista29378[chr19:40466097-40466407]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29378[chr19:40466097-40466407]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 40353963 40440533 - FCGBP ENSG00000090920.9 40440533 0.96 1.0 17534 74436
chr19 40476912 40487348 + PSMC4 ENSG00000013275.3 40476912 0.55 1.0 17535 89495
chr19 40490041 40523514 + ZNF546 ENSG00000187187.9 40490041 0.73 0.85 17536 76366
chr19 40534167 40562116 - ZNF780B ENSG00000128000.11 40562116 0.76 0.98 17537 4291
Expression level of Genes
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miRNAs possibly regulated by vista29378[chr19:40466097-40466407]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results