EnhancerDB
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  3. vista29389[chr19:40939716-40940068]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29389[chr19:40939716-40940068]
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Tissue distribution of vista29389
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Transcription factor that possibly regulate vista29389[chr19:40939716-40940068]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 40939351 40940382 POLR2A UCSC Txn Factor no Conserved 108409462
chr19 40939709 40939884 SPI1 UCSC Txn Factor no Conserved 108409512
chr19 40939814 40940102 CCNT2 UCSC Txn Factor no Conserved 108409527
chr19 40939889 40940199 NR3C1 UCSC Txn Factor no Conserved 108409550
chr19 40939717 40939722 SP1 TRANSFAC yes 70846673
chr19 40939717 40939722 SP1 TRANSFAC yes 113333556
chr19 40939724 40939736 YY1 JASPAR yes 70846674
chr19 40939724 40939736 YY1 JASPAR yes 113333557
chr19 40939743 40939757 TCF7L2 JASPAR yes 70846675
chr19 40939743 40939757 TCF7L2 JASPAR yes 113333558
chr19 40939747 40939753 TCF1 TRANSFAC yes 70846676
chr19 40939747 40939753 TCF1 TRANSFAC yes 113333559
chr19 40939750 40939771 ZNF263 JASPAR yes 70846677
chr19 40939750 40939771 ZNF263 JASPAR yes 113333560
chr19 40939757 40939767 SP1 JASPAR yes 70846678
chr19 40939757 40939767 SP1 JASPAR yes 113333561
chr19 40939757 40939778 ZNF263 JASPAR yes 70846679
chr19 40939757 40939778 ZNF263 JASPAR yes 113333562
chr19 40939758 40939779 ZNF263 JASPAR yes 70846680
chr19 40939758 40939779 ZNF263 JASPAR yes 113333563
chr19 40939759 40939764 ETS2 TRANSFAC yes 70846681
chr19 40939759 40939764 ETS2 TRANSFAC yes 113333564
chr19 40939782 40939797 TFAP2A JASPAR yes 70846682
chr19 40939782 40939797 TFAP2C JASPAR yes 70846683
chr19 40939782 40939797 TFAP2A JASPAR yes 113333565
chr19 40939782 40939797 TFAP2C JASPAR yes 113333566
chr19 40939787 40939792 TFAP2A TRANSFAC yes 70846684
chr19 40939787 40939792 TFAP2A TRANSFAC yes 113333567
chr19 40939787 40939793 MZF1 JASPAR yes 70846685
chr19 40939787 40939793 MZF1 JASPAR yes 113333568
chr19 40939789 40939803 STAT1 JASPAR yes 70846686
chr19 40939789 40939803 STAT1 JASPAR yes 113333569
chr19 40939789 40939804 STAT2 JASPAR yes 70846687
chr19 40939789 40939804 STAT2 JASPAR yes 113333570
chr19 40939789 40939807 IRF2 JASPAR yes 70846688
chr19 40939789 40939807 IRF2 JASPAR yes 113333571
chr19 40939790 40939802 IRF1 JASPAR yes 70846689
chr19 40939790 40939802 IRF1 JASPAR yes 113333572
chr19 40939839 40939858 CTCF JASPAR yes 70846690
chr19 40939839 40939858 CTCF JASPAR yes 113333573
chr19 40939852 40939857 TFAP2A TRANSFAC yes 70846691
chr19 40939852 40939857 TFAP2A TRANSFAC yes 113333574
chr19 40939852 40939858 MZF1 JASPAR yes 70846692
chr19 40939852 40939858 MZF1 JASPAR yes 113333575
chr19 40939852 40939873 ZNF263 JASPAR yes 70846693
chr19 40939852 40939873 ZNF263 JASPAR yes 113333576
chr19 40939854 40939860 MAZ TRANSFAC yes 70846694
chr19 40939854 40939860 MAZ TRANSFAC yes 113333577
chr19 40939854 40939865 E2F6 JASPAR yes 70846695
chr19 40939854 40939865 E2F6 JASPAR yes 113333578
chr19 40939855 40939876 ZNF263 JASPAR yes 70846696
chr19 40939855 40939876 ZNF263 JASPAR yes 113333579
chr19 40939856 40939877 ZNF263 JASPAR yes 70846697
chr19 40939856 40939877 ZNF263 JASPAR yes 113333580
chr19 40939859 40939869 SP1 JASPAR yes 70846698
chr19 40939859 40939869 SP1 JASPAR yes 113333581
chr19 40939859 40939880 ZNF263 JASPAR yes 70846699
chr19 40939859 40939880 ZNF263 JASPAR yes 113333582
chr19 40939864 40939885 ZNF263 JASPAR yes 70846700
chr19 40939864 40939885 ZNF263 JASPAR yes 113333583
chr19 40939866 40939872 MAZ TRANSFAC yes 70846701
chr19 40939866 40939872 MAZ TRANSFAC yes 113333584
chr19 40939866 40939876 SP1 JASPAR yes 70846702
chr19 40939866 40939876 SP1 JASPAR yes 113333585
chr19 40939888 40939895 SP1 TRANSFAC yes 70846703
chr19 40939888 40939895 SP1 TRANSFAC yes 113333586
chr19 40939889 40939896 SP1 TRANSFAC yes 70846704
chr19 40939889 40939896 SP1 TRANSFAC yes 113333587
chr19 40939890 40939895 SP1 TRANSFAC yes 70846705
chr19 40939890 40939895 SP1 TRANSFAC yes 113333588
chr19 40939890 40939896 SP1 TRANSFAC yes 70846706
chr19 40939890 40939896 SP1 TRANSFAC yes 113333589
chr19 40939903 40939914 EBF1 JASPAR yes 70846707
chr19 40939903 40939914 EBF1 JASPAR yes 113333590
chr19 40939907 40939912 TFAP2A TRANSFAC yes 70846708
chr19 40939907 40939912 TFAP2A TRANSFAC yes 113333591
chr19 40939907 40939913 MZF1 JASPAR yes 70846709
chr19 40939907 40939913 MZF1 JASPAR yes 113333592
chr19 40939909 40939915 MAZ TRANSFAC yes 70846710
chr19 40939909 40939915 MAZ TRANSFAC yes 113333593
chr19 40939909 40939920 E2F6 JASPAR yes 70846711
chr19 40939909 40939920 E2F6 JASPAR yes 113333594
chr19 40939967 40939979 TFAP2A JASPAR yes 70846712
chr19 40939967 40939979 TFAP2A JASPAR yes 113333595
chr19 40939969 40939978 TFAP2A JASPAR yes 70846713
chr19 40939969 40939978 TFAP2A JASPAR yes 113333596
chr19 40939971 40939986 NR2C2 JASPAR yes 70846714
chr19 40939971 40939986 NR2C2 JASPAR yes 113333597
chr19 40939973 40939979 SP1 TRANSFAC yes 70846715
chr19 40939973 40939979 SP1 TRANSFAC yes 113333598
chr19 40939974 40939979 SP1 TRANSFAC yes 70846716
chr19 40939974 40939979 SP1 TRANSFAC yes 113333599
chr19 40939979 40940000 ZNF263 JASPAR yes 70846717
chr19 40939979 40940000 ZNF263 JASPAR yes 113333600
chr19 40939982 40939987 SP1 TRANSFAC yes 70846718
chr19 40939982 40939987 SP1 TRANSFAC yes 113333601
chr19 40939983 40940002 PAX5 JASPAR yes 70846719
chr19 40939983 40940002 PAX5 JASPAR yes 113333602
chr19 40939985 40939989 LFA1 TRANSFAC yes 70846720
chr19 40939985 40939989 LFA1 TRANSFAC yes 113333603
chr19 40939985 40940000 ZIC3 JASPAR yes 70846721
chr19 40939985 40940000 ZIC3 JASPAR yes 113333604
chr19 40939993 40939999 MAZ TRANSFAC yes 70846722
chr19 40939993 40939999 MAZ TRANSFAC yes 113333605
chr19 40940006 40940017 E2F4 JASPAR yes 70846723
chr19 40940006 40940017 E2F6 JASPAR yes 70846724
chr19 40940006 40940017 E2F4 JASPAR yes 113333606
chr19 40940006 40940017 E2F6 JASPAR yes 113333607
chr19 40940007 40940018 E2F1 JASPAR yes 70846725
chr19 40940007 40940018 E2F1 JASPAR yes 113333608
chr19 40940016 40940021 SP1 TRANSFAC yes 70846726
chr19 40940016 40940021 SP1 TRANSFAC yes 113333609
chr19 40940018 40940027 TFAP2A JASPAR yes 70846727
chr19 40940018 40940027 TFAP2A JASPAR yes 113333610
chr19 40940022 40940028 SP1 TRANSFAC yes 70846728
chr19 40940022 40940028 SP1 TRANSFAC yes 113333611
chr19 40940023 40940028 SP1 TRANSFAC yes 70846729
chr19 40940023 40940028 SP1 TRANSFAC yes 113333612
chr19 40940024 40940029 SP1 TRANSFAC yes 70846730
chr19 40940024 40940029 SP1 TRANSFAC yes 113333613
chr19 40940029 40940038 TFAP2A JASPAR yes 70846731
chr19 40940029 40940038 TFAP2A JASPAR yes 113333614
chr19 40940037 40940047 SP1 JASPAR yes 70846732
chr19 40940037 40940047 SP1 JASPAR yes 113333615
chr19 40940039 40940053 ZIC1 JASPAR yes 70846733
chr19 40940039 40940053 ZIC1 JASPAR yes 113333616
chr19 40940039 40940054 ZIC3 JASPAR yes 70846734
chr19 40940039 40940054 ZIC3 JASPAR yes 113333617
chr19 40940043 40940049 SP1 TRANSFAC yes 70846735
chr19 40940043 40940049 SP1 TRANSFAC yes 113333618
chr19 40940052 40940073 ZNF263 JASPAR yes 70846736
chr19 40940052 40940073 ZNF263 JASPAR yes 113333619
chr19 40940053 40940060 CEBPA TRANSFAC yes 70846737
chr19 40940053 40940060 CEBPA TRANSFAC yes 113333620
chr19 40940058 40940062 LFA1 TRANSFAC yes 70846738
chr19 40940058 40940062 LFA1 TRANSFAC yes 113333621
chr19 40940066 40940071 TFAP2A TRANSFAC yes 70846739
chr19 40940066 40940071 TFAP2A TRANSFAC yes 113333622
chr19 40940066 40940072 MZF1 JASPAR yes 70846740
chr19 40940066 40940072 MZF1 JASPAR yes 113333623
SNP sites on vista29389[chr19:40939716-40940068]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29389[chr19:40939716-40940068]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 40825443 40854434 - C19orf47 ENSG00000160392.9 40854434 0.66 1.0 17543 14718
chr19 40854363 40886346 + PLD3 ENSG00000105223.14 40854363 0.68 1.0 17544 14647
chr19 40885178 40896094 - HIPK4 ENSG00000160396.8 40896094 0.83 1.0 17545 56378
chr19 40899675 40919273 - PRX ENSG00000105227.10 40919273 0.94 1.0 17546 79557
chr19 40927499 40931932 - SERTAD1 ENSG00000197019.4 40931932 0.74 1.0 17547 92216
chr19 40946751 40950612 - SERTAD3 ENSG00000167565.8 40950612 0.59 1.0 17548 89456
chr19 40953696 40971747 - BLVRB ENSG00000090013.5 40971747 0.8 1.0 17549 68321
chr19 40972148 41082370 + SPTBN4 ENSG00000160460.11 40972148 0.88 1.0 17550 67920
Expression level of Genes
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miRNAs possibly regulated by vista29389[chr19:40939716-40940068]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results