EnhancerDB
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  3. vista29398[chr19:41120897-41121111]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29398[chr19:41120897-41121111]
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Tissue distribution of vista29398
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Transcription factor that possibly regulate vista29398[chr19:41120897-41121111]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 41119090 41121085 POLR2A UCSC Txn Factor no Conserved 108409750
chr19 41120907 41120913 YY1 JASPAR yes 70847336
chr19 41120925 41120934 NKX3-2 JASPAR yes 70847337
chr19 41120937 41120958 ZNF263 JASPAR yes 70847338
chr19 41120940 41120948 EHF JASPAR yes 70847339
chr19 41120945 41120949 NFE TRANSFAC yes 70847340
chr19 41120945 41120950 GATA1 TRANSFAC yes 70847341
chr19 41120945 41120951 GATA3 JASPAR yes 70847342
chr19 41120949 41120955 TCF4 TRANSFAC yes 70847343
chr19 41120954 41120964 SP1 JASPAR yes 70847344
chr19 41120955 41120967 ZBTB7A JASPAR yes 70847345
chr19 41120956 41120961 SP1 TRANSFAC yes 70847346
chr19 41120956 41120971 RUNX2 JASPAR yes 70847347
chr19 41120965 41120974 SP1 TRANSFAC yes 70847348
chr19 41120967 41120974 SP1 TRANSFAC yes 70847349
chr19 41120968 41120973 SP1 TRANSFAC yes 70847350
chr19 41120968 41120974 SP1 TRANSFAC yes 70847351
chr19 41120986 41121003 BCL6B JASPAR yes 70847352
chr19 41120997 41121008 E2F6 JASPAR yes 70847353
chr19 41120997 41121018 ZNF263 JASPAR yes 70847354
chr19 41121000 41121021 ZNF263 JASPAR yes 70847355
chr19 41121001 41121012 E2F4 JASPAR yes 70847356
chr19 41121001 41121012 E2F6 JASPAR yes 70847357
chr19 41121002 41121013 E2F1 JASPAR yes 70847358
chr19 41121005 41121012 SP1 TRANSFAC yes 70847359
chr19 41121006 41121011 SP1 TRANSFAC yes 70847360
chr19 41121006 41121012 SP1 TRANSFAC yes 70847361
chr19 41121012 41121027 NR2C2 JASPAR yes 70847362
chr19 41121017 41121028 TBX20 JASPAR yes 70847363
chr19 41121019 41121029 MZF1 JASPAR yes 70847364
chr19 41121022 41121028 SP1 TRANSFAC yes 70847365
chr19 41121031 41121035 ESR1 TRANSFAC yes 70847366
chr19 41121055 41121060 SP1 TRANSFAC yes 70847367
chr19 41121082 41121086 YY1 TRANSFAC yes 70847368
chr19 41121092 41121107 ZIC4 JASPAR yes 70847369
chr19 41121093 41121103 SP1 JASPAR yes 70847370
chr19 41121093 41121107 GLIS2 JASPAR yes 70847371
chr19 41121096 41121101 SP1 TRANSFAC yes 70847372
chr19 41121096 41121102 SP1 TRANSFAC yes 70847373
chr19 41121096 41121106 SP1 JASPAR yes 70847374
chr19 41121097 41121107 ZNF740 JASPAR yes 70847375
chr19 41121098 41121108 SP1 JASPAR yes 70847376
chr19 41121098 41121108 ZNF740 JASPAR yes 70847377
chr19 41121099 41121109 SP1 JASPAR yes 70847378
chr19 41121099 41121109 ZNF740 JASPAR yes 70847379
chr19 41121100 41121110 SP1 JASPAR yes 70847380
chr19 41121100 41121110 ZNF740 JASPAR yes 70847381
chr19 41121101 41121111 SP1 JASPAR yes 70847382
chr19 41121101 41121111 ZNF740 JASPAR yes 70847383
SNP sites on vista29398[chr19:41120897-41121111]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29398[chr19:41120897-41121111]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 41082757 41097305 + SHKBP1 ENSG00000160410.10 41082757 0.76 1.0 17551 61860
chr19 41098789 41135725 + LTBP4 ENSG00000090006.13 41098789 0.8 1.0 17552 77892
chr19 41172596 41196877 - NUMBL ENSG00000105245.5 41196877 0.8 1.0 17553 24234
Expression level of Genes
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miRNAs possibly regulated by vista29398[chr19:41120897-41121111]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results