EnhancerDB
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  3. vista2940[chr1:111677638-111678032]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2940[chr1:111677638-111678032]
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Tissue distribution of vista2940
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Transcription factor that possibly regulate vista2940[chr1:111677638-111678032]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 111677640 111677649 ZEB1 JASPAR yes 31509729
chr1 111677640 111677649 ZEB1 JASPAR yes 118351028
chr1 111677641 111677651 FIGLA JASPAR yes 31509730
chr1 111677641 111677651 TCF4 JASPAR yes 31509731
chr1 111677641 111677651 FIGLA JASPAR yes 118351029
chr1 111677641 111677651 TCF4 JASPAR yes 118351030
chr1 111677643 111677648 USF2 TRANSFAC yes 31509732
chr1 111677643 111677648 USF2 TRANSFAC yes 118351031
chr1 111677662 111677667 ETS2 TRANSFAC yes 31509733
chr1 111677662 111677667 ETS2 TRANSFAC yes 118351032
chr1 111677695 111677706 E2F6 JASPAR yes 31509734
chr1 111677695 111677706 E2F6 JASPAR yes 118351033
chr1 111677695 111677708 SMAD2 JASPAR yes 31509735
chr1 111677695 111677708 SMAD2 JASPAR yes 118351034
chr1 111677705 111677709 YY1 TRANSFAC yes 31509736
chr1 111677705 111677709 YY1 TRANSFAC yes 118351035
chr1 111677748 111677752 H4TF2 TRANSFAC yes 31509737
chr1 111677748 111677752 H4TF2 TRANSFAC yes 118351036
chr1 111677765 111677769 LFA1 TRANSFAC yes 31509738
chr1 111677765 111677769 LFA1 TRANSFAC yes 118351037
chr1 111677780 111677784 H1TF2 TRANSFAC yes 31509739
chr1 111677780 111677784 NFE TRANSFAC yes 31509740
chr1 111677780 111677784 SRF TRANSFAC yes 31509741
chr1 111677780 111677784 H1TF2 TRANSFAC yes 118351038
chr1 111677780 111677784 NFE TRANSFAC yes 118351039
chr1 111677780 111677784 SRF TRANSFAC yes 118351040
chr1 111677802 111677811 NKX2-8 JASPAR yes 31509742
chr1 111677802 111677811 NKX2-8 JASPAR yes 118351041
chr1 111677802 111677812 NKX2-3 JASPAR yes 31509743
chr1 111677802 111677812 NKX2-3 JASPAR yes 118351042
chr1 111677806 111677816 NFATC3 JASPAR yes 31509744
chr1 111677806 111677816 NFATC3 JASPAR yes 118351043
chr1 111677813 111677820 NKX3-1 JASPAR yes 31509745
chr1 111677813 111677820 NKX3-1 JASPAR yes 118351044
chr1 111677829 111677840 FOXA1 JASPAR yes 31509746
chr1 111677829 111677840 FOXA1 JASPAR yes 118351045
chr1 111677830 111677841 FOXB1 JASPAR yes 31509747
chr1 111677830 111677841 FOXC1 JASPAR yes 31509748
chr1 111677830 111677841 FOXB1 JASPAR yes 118351046
chr1 111677830 111677841 FOXC1 JASPAR yes 118351047
chr1 111677830 111677842 FOXC2 JASPAR yes 31509749
chr1 111677830 111677842 FOXC2 JASPAR yes 118351048
chr1 111677832 111677840 FOXO3 JASPAR yes 31509750
chr1 111677832 111677840 FOXO3 JASPAR yes 118351049
chr1 111677841 111677853 INSM1 JASPAR yes 31509751
chr1 111677841 111677853 INSM1 JASPAR yes 118351050
chr1 111677850 111677856 HiNF-A TRANSFAC yes 31509752
chr1 111677850 111677856 HiNF-A TRANSFAC yes 118351051
chr1 111677860 111677870 BARHL2 JASPAR yes 31509753
chr1 111677860 111677870 BARHL2 JASPAR yes 118351052
chr1 111677862 111677866 YY1 TRANSFAC yes 31509754
chr1 111677862 111677866 YY1 TRANSFAC yes 118351053
chr1 111677865 111677872 JUN TRANSFAC yes 31509755
chr1 111677865 111677872 JUN TRANSFAC yes 118351054
chr1 111677899 111677904 MYB TRANSFAC yes 31509756
chr1 111677899 111677904 MYB TRANSFAC yes 118351055
chr1 111677903 111677915 HES5 JASPAR yes 31509757
chr1 111677903 111677915 HES5 JASPAR yes 118351056
chr1 111677905 111677915 MAX JASPAR yes 31509758
chr1 111677905 111677915 MAX JASPAR yes 118351057
chr1 111677927 111677932 GATA2 JASPAR yes 31509759
chr1 111677927 111677932 GATA2 JASPAR yes 118351058
chr1 111677938 111677942 NFE TRANSFAC yes 31509760
chr1 111677938 111677942 NFE TRANSFAC yes 118351059
chr1 111677938 111677943 GATA1 TRANSFAC yes 31509761
chr1 111677938 111677943 GATA1 TRANSFAC yes 118351060
chr1 111677938 111677944 GATA3 JASPAR yes 31509762
chr1 111677938 111677944 GATA3 JASPAR yes 118351061
chr1 111677963 111677976 SMAD2 JASPAR yes 31509763
chr1 111677963 111677976 SMAD2 JASPAR yes 118351062
chr1 111677966 111677974 MEIS3 JASPAR yes 31509764
chr1 111677966 111677974 MEIS3 JASPAR yes 118351063
chr1 111677967 111677971 NFE TRANSFAC yes 31509765
chr1 111677967 111677971 NFE TRANSFAC yes 118351064
chr1 111677968 111677979 USF2 JASPAR yes 31509766
chr1 111677968 111677979 USF2 JASPAR yes 118351065
chr1 111677968 111677980 PKNOX1 JASPAR yes 31509767
chr1 111677968 111677980 PKNOX2 JASPAR yes 31509768
chr1 111677968 111677980 TGIF1 JASPAR yes 31509769
chr1 111677968 111677980 TGIF2 JASPAR yes 31509770
chr1 111677968 111677980 PKNOX1 JASPAR yes 118351066
chr1 111677968 111677980 PKNOX2 JASPAR yes 118351067
chr1 111677968 111677980 TGIF1 JASPAR yes 118351068
chr1 111677968 111677980 TGIF2 JASPAR yes 118351069
chr1 111677969 111677976 USF2 TRANSFAC yes 31509771
chr1 111677969 111677976 USF2 TRANSFAC yes 118351070
chr1 111677971 111677976 USF2 TRANSFAC yes 31509772
chr1 111677971 111677976 USF2 TRANSFAC yes 118351071
chr1 111677974 111677978 NFE TRANSFAC yes 31509773
chr1 111677974 111677978 NFE TRANSFAC yes 118351072
chr1 111677992 111678006 SPI1 JASPAR yes 31509774
chr1 111677992 111678006 SPI1 JASPAR yes 118351073
chr1 111678000 111678004 NFE TRANSFAC yes 31509775
chr1 111678000 111678004 NFE TRANSFAC yes 118351074
chr1 111678018 111678029 FOXA1 JASPAR yes 31509776
chr1 111678018 111678029 FOXA1 JASPAR yes 118351075
chr1 111678020 111678025 ETS2 TRANSFAC yes 31509777
chr1 111678020 111678025 ETS2 TRANSFAC yes 118351076
chr1 111678024 111678030 HiNF-A TRANSFAC yes 31509778
chr1 111678024 111678030 HiNF-A TRANSFAC yes 118351077
SNP sites on vista2940[chr1:111677638-111678032]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 111677653 rs187267332 C G no 556715
chr1 111677790 rs191720483 T C,G no 556716
chr1 111677842 rs114540220 C A
FOXC2 INSM1
556717
chr1 111677928 rs138694244 G C
GATA2
556718
chr1 111677941 rs142727118 A C,G
GATA1 GATA3 NFE
556719
chr1 111677950 rs144501539 C T no 556720
Genes possibly regulated by vista2940[chr1:111677638-111678032]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 111659955 111682838 - DRAM2 ENSG00000156171.10 111682838 0.65 1.0 1007 95194
chr1 111682249 111727724 + CEPT1 ENSG00000134255.9 111682249 0.78 0.99 1008 95783
chr1 111729796 111747157 - DENND2D ENSG00000162777.12 111747157 0.9 1.0 1009 30875
chr1 111743393 111786062 + CHI3L2 ENSG00000064886.9 111743393 0.98 0.99 1010 34639
Expression level of Genes
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miRNAs possibly regulated by vista2940[chr1:111677638-111678032]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results