EnhancerDB
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  3. vista29401[chr19:41170823-41170969]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29401[chr19:41170823-41170969]
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Tissue distribution of vista29401
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Transcription factor that possibly regulate vista29401[chr19:41170823-41170969]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 41170810 41170825 STAT1 JASPAR yes 70847506
chr19 41170810 41170825 STAT1 JASPAR yes 113343918
chr19 41170812 41170823 STAT1 JASPAR yes 70847507
chr19 41170812 41170823 STAT3 JASPAR yes 70847508
chr19 41170812 41170823 STAT1 JASPAR yes 113343919
chr19 41170812 41170823 STAT3 JASPAR yes 113343920
chr19 41170819 41170840 MAFG JASPAR yes 70847509
chr19 41170819 41170840 MAFG JASPAR yes 113343923
chr19 41170823 41170834 NFE2L2 JASPAR yes 70847510
chr19 41170823 41170834 NFE2L2 JASPAR yes 113343924
chr19 41170838 41170843 ETS2 TRANSFAC yes 70847511
chr19 41170838 41170843 ETS2 TRANSFAC yes 113343925
chr19 41170870 41170883 POU2F2 JASPAR yes 70847512
chr19 41170870 41170883 POU2F2 JASPAR yes 113343926
chr19 41170872 41170885 SCRT2 JASPAR yes 70847513
chr19 41170872 41170885 SCRT2 JASPAR yes 113343927
chr19 41170883 41170898 PRDM1 JASPAR yes 70847514
chr19 41170883 41170898 PRDM1 JASPAR yes 113343928
chr19 41170884 41170899 NR2C2 JASPAR yes 70847515
chr19 41170884 41170899 NR2C2 JASPAR yes 113343929
chr19 41170895 41170909 GATA2 JASPAR yes 70847516
chr19 41170895 41170909 GATA2 JASPAR yes 113343930
chr19 41170899 41170907 GATA3 JASPAR yes 70847517
chr19 41170899 41170907 GATA3 JASPAR yes 113343931
chr19 41170904 41170919 HSF1 JASPAR yes 70847518
chr19 41170904 41170919 HSF1 JASPAR yes 113343932
chr19 41170914 41170918 H4TF2 TRANSFAC yes 70847519
chr19 41170914 41170918 H4TF2 TRANSFAC yes 113343933
chr19 41170932 41170945 NFKB2 JASPAR yes 70847520
chr19 41170932 41170945 NFKB2 JASPAR yes 113343934
chr19 41170933 41170943 NFKB1 JASPAR yes 70847521
chr19 41170933 41170943 RELA JASPAR yes 70847522
chr19 41170933 41170943 REL JASPAR yes 70847523
chr19 41170933 41170943 NFKB1 JASPAR yes 113343935
chr19 41170933 41170943 RELA JASPAR yes 113343936
chr19 41170933 41170943 REL JASPAR yes 113343937
chr19 41170933 41170944 NFKB1 JASPAR yes 70847524
chr19 41170933 41170944 NFKB1 JASPAR yes 113343938
chr19 41170934 41170944 NFKB1 JASPAR yes 70847525
chr19 41170934 41170944 NFKB1 JASPAR yes 113343939
chr19 41170938 41170954 GLIS1 JASPAR yes 70847526
chr19 41170938 41170954 GLIS1 JASPAR yes 113343940
chr19 41170947 41170952 ATF1 TRANSFAC yes 70847527
chr19 41170947 41170952 ATF1 TRANSFAC yes 113343941
chr19 41170963 41170982 REST JASPAR yes 70847528
chr19 41170963 41170982 REST JASPAR yes 113343942
chr19 41170966 41170970 NFE TRANSFAC yes 70847529
chr19 41170966 41170970 NFE TRANSFAC yes 113343943
SNP sites on vista29401[chr19:41170823-41170969]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29401[chr19:41170823-41170969]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 41082757 41097305 + SHKBP1 ENSG00000160410.10 41082757 0.76 1.0 17551 11934
chr19 41098789 41135725 + LTBP4 ENSG00000090006.13 41098789 0.8 1.0 17552 27966
chr19 41172596 41196877 - NUMBL ENSG00000105245.5 41196877 0.8 1.0 17553 74092
chr19 41197434 41224112 - ADCK4 ENSG00000123815.7 41224112 0.63 1.0 17554 46857
chr19 41223008 41246765 + ITPKC ENSG00000086544.2 41223008 0.78 1.0 17555 47961
chr19 41246761 41257458 - C19orf54 ENSG00000188493.10 41257458 0.66 1.0 17556 13511
chr19 41256542 41271294 + SNRPA ENSG00000077312.4 41256542 0.7 1.0 17557 14427
Expression level of Genes
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miRNAs possibly regulated by vista29401[chr19:41170823-41170969]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results