EnhancerDB
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  3. vista29410[chr19:41680959-41681276]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29410[chr19:41680959-41681276]
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Tissue distribution of vista29410
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Transcription factor that possibly regulate vista29410[chr19:41680959-41681276]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 41680950 41680959 SRY JASPAR yes 70847851
chr19 41680950 41680959 SRY JASPAR yes 113366579
chr19 41680952 41680961 SOX9 JASPAR yes 70847852
chr19 41680952 41680961 SOX9 JASPAR yes 113366580
chr19 41680970 41680991 ZNF263 JASPAR yes 70847853
chr19 41680970 41680991 ZNF263 JASPAR yes 113366581
chr19 41680973 41680994 ZNF263 JASPAR yes 70847854
chr19 41680973 41680994 ZNF263 JASPAR yes 113366582
chr19 41680981 41681002 ZNF263 JASPAR yes 70847855
chr19 41680981 41681002 ZNF263 JASPAR yes 113366583
chr19 41681022 41681040 ESR1 JASPAR yes 70847856
chr19 41681022 41681040 ESR2 JASPAR yes 70847857
chr19 41681022 41681040 ESR1 JASPAR yes 113366584
chr19 41681022 41681040 ESR2 JASPAR yes 113366585
chr19 41681023 41681033 SP1 JASPAR yes 70847858
chr19 41681023 41681033 SP1 JASPAR yes 113366586
chr19 41681023 41681038 ESR2 JASPAR yes 70847859
chr19 41681023 41681038 ESR2 JASPAR yes 113366587
chr19 41681023 41681043 ESR1 JASPAR yes 70847860
chr19 41681023 41681043 ESR1 JASPAR yes 113366588
chr19 41681036 41681045 THAP1 JASPAR yes 70847861
chr19 41681036 41681045 THAP1 JASPAR yes 113366589
chr19 41681039 41681043 LFA1 TRANSFAC yes 70847862
chr19 41681039 41681043 LFA1 TRANSFAC yes 113366590
chr19 41681040 41681051 USF1 JASPAR yes 70847863
chr19 41681040 41681051 USF2 JASPAR yes 70847864
chr19 41681040 41681051 USF1 JASPAR yes 113366591
chr19 41681040 41681051 USF2 JASPAR yes 113366592
chr19 41681054 41681058 H4TF2 TRANSFAC yes 70847865
chr19 41681054 41681058 H4TF2 TRANSFAC yes 113366593
chr19 41681066 41681081 STAT2 JASPAR yes 70847866
chr19 41681066 41681081 STAT2 JASPAR yes 113366594
chr19 41681069 41681082 JUN JASPAR yes 70847867
chr19 41681069 41681082 JUN JASPAR yes 113366595
chr19 41681102 41681107 GATA1 TRANSFAC yes 70847868
chr19 41681102 41681107 GATA1 TRANSFAC yes 113366596
chr19 41681140 41681144 TEAD2 TRANSFAC yes 70847869
chr19 41681140 41681144 TEAD2 TRANSFAC yes 113366597
chr19 41681140 41681154 PAX6 JASPAR yes 70847870
chr19 41681140 41681154 PAX6 JASPAR yes 113366598
chr19 41681149 41681153 YY1 TRANSFAC yes 70847871
chr19 41681149 41681153 YY1 TRANSFAC yes 113366599
chr19 41681202 41681217 ZIC3 JASPAR yes 70847872
chr19 41681202 41681217 ZIC4 JASPAR yes 70847873
chr19 41681202 41681217 ZIC3 JASPAR yes 113366600
chr19 41681202 41681217 ZIC4 JASPAR yes 113366601
chr19 41681203 41681217 ZIC1 JASPAR yes 70847874
chr19 41681203 41681217 ZIC1 JASPAR yes 113366602
chr19 41681257 41681278 ZNF263 JASPAR yes 70847875
chr19 41681257 41681278 ZNF263 JASPAR yes 113366603
SNP sites on vista29410[chr19:41680959-41681276]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29410[chr19:41680959-41681276]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 41594377 41602100 + CYP2A13 ENSG00000197838.4 41594377 0.98 0.0 17567 13418
chr19 41620337 41634271 + CYP2F1 ENSG00000197446.4 41620337 0.96 1.0 17568 39378
chr19 41698954 41713444 + CYP2S1 ENSG00000167600.9 41698954 0.94 1.0 17569 82322
chr19 41725108 41767671 + AXL ENSG00000167601.7 41725108 0.74 1.0 17570 56168
chr19 41768401 41813503 + HNRNPUL1 ENSG00000105323.12 41768401 0.68 0.99 17571 12875
Expression level of Genes
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miRNAs possibly regulated by vista29410[chr19:41680959-41681276]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results