EnhancerDB
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  3. vista29420[chr19:41803374-41803837]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29420[chr19:41803374-41803837]
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Tissue distribution of vista29420
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Transcription factor that possibly regulate vista29420[chr19:41803374-41803837]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 41803600 41803813 POU2F2 UCSC Txn Factor no Conserved 108410613
chr19 41803646 41803865 PAX5 UCSC Txn Factor no Conserved 108410615
chr19 41803396 41803415 CTCF JASPAR yes 70848187
chr19 41803399 41803403 H4TF2 TRANSFAC yes 70848188
chr19 41803411 41803422 TBX20 JASPAR yes 70848189
chr19 41803412 41803420 TBX15 JASPAR yes 70848190
chr19 41803412 41803423 E2F6 JASPAR yes 70848191
chr19 41803413 41803418 SP1 TRANSFAC yes 70848192
chr19 41803416 41803421 ETS2 TRANSFAC yes 70848193
chr19 41803417 41803432 HSF1 JASPAR yes 70848194
chr19 41803418 41803431 HSF1 JASPAR yes 70848195
chr19 41803418 41803431 HSF2 JASPAR yes 70848196
chr19 41803418 41803431 HSF4 JASPAR yes 70848197
chr19 41803442 41803456 TLX1 JASPAR yes 70848198
chr19 41803451 41803465 PLAG1 JASPAR yes 70848199
chr19 41803464 41803476 YY1 JASPAR yes 70848200
chr19 41803478 41803498 TP63 JASPAR yes 70848201
chr19 41803482 41803497 AR JASPAR yes 70848202
chr19 41803520 41803535 HSF1 JASPAR yes 70848203
chr19 41803521 41803534 HSF1 JASPAR yes 70848204
chr19 41803521 41803534 HSF2 JASPAR yes 70848205
chr19 41803521 41803534 HSF4 JASPAR yes 70848206
chr19 41803525 41803539 PLAG1 JASPAR yes 70848207
chr19 41803534 41803539 TFAP2A TRANSFAC yes 70848208
chr19 41803534 41803540 MZF1 JASPAR yes 70848209
chr19 41803535 41803546 NFKB1 JASPAR yes 70848210
chr19 41803547 41803565 ESR2 JASPAR yes 70848211
chr19 41803548 41803560 YY1 JASPAR yes 70848212
chr19 41803549 41803569 ESR1 JASPAR yes 70848213
chr19 41803579 41803599 ESR1 JASPAR yes 70848214
chr19 41803580 41803584 LFA1 TRANSFAC yes 70848215
chr19 41803582 41803601 RFX2 JASPAR yes 70848216
chr19 41803615 41803618 MYB TRANSFAC yes 70848217
chr19 41803660 41803672 CREB1 JASPAR yes 70848218
chr19 41803662 41803676 ATF7 JASPAR yes 70848219
chr19 41803662 41803676 BATF3 JASPAR yes 70848220
chr19 41803663 41803675 JDP2 JASPAR yes 70848221
chr19 41803665 41803670 ATF1 TRANSFAC yes 70848222
chr19 41803665 41803673 CREB1 JASPAR yes 70848223
chr19 41803667 41803672 ATF1 TRANSFAC yes 70848224
chr19 41803677 41803694 NR3C1 JASPAR yes 70848225
chr19 41803677 41803694 NR3C2 JASPAR yes 70848226
chr19 41803697 41803710 POU2F2 JASPAR yes 70848227
chr19 41803697 41803711 POU1F1 JASPAR yes 70848228
chr19 41803698 41803710 POU3F1 JASPAR yes 70848229
chr19 41803698 41803710 POU3F2 JASPAR yes 70848230
chr19 41803698 41803711 POU3F3 JASPAR yes 70848231
chr19 41803699 41803703 YY1 TRANSFAC yes 70848232
chr19 41803699 41803711 POU2F1 JASPAR yes 70848233
chr19 41803700 41803707 POU2F1 TRANSFAC yes 70848234
chr19 41803700 41803707 POU2F2C TRANSFAC yes 70848235
chr19 41803700 41803707 POU2F2 TRANSFAC yes 70848236
chr19 41803700 41803709 POU5F1B JASPAR yes 70848237
chr19 41803703 41803714 SPDEF JASPAR yes 70848238
chr19 41803710 41803729 CTCF JASPAR yes 70848239
chr19 41803711 41803715 ESR1 TRANSFAC yes 70848240
chr19 41803712 41803723 NRL JASPAR yes 70848241
chr19 41803715 41803724 SNAI2 JASPAR yes 70848242
chr19 41803715 41803725 ID4 JASPAR yes 70848243
chr19 41803715 41803725 TCF3 JASPAR yes 70848244
chr19 41803715 41803725 TCF4 JASPAR yes 70848245
chr19 41803732 41803753 IRF1 JASPAR yes 70848246
chr19 41803734 41803749 IRF9 JASPAR yes 70848247
chr19 41803735 41803749 IRF8 JASPAR yes 70848248
chr19 41803736 41803751 STAT2 JASPAR yes 70848249
chr19 41803768 41803773 MYC TRANSFAC yes 70848250
chr19 41803773 41803776 MYB TRANSFAC yes 70848251
chr19 41803785 41803789 YY1 TRANSFAC yes 70848252
chr19 41803799 41803805 PEA3 TRANSFAC yes 70848253
chr19 41803800 41803808 EHF JASPAR yes 70848254
chr19 41803809 41803830 ZNF263 JASPAR yes 70848255
chr19 41803816 41803821 ETS2 TRANSFAC yes 70848256
chr19 41803824 41803830 MZF1 JASPAR yes 70848257
SNP sites on vista29420[chr19:41803374-41803837]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29420[chr19:41803374-41803837]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 41725108 41767671 + AXL ENSG00000167601.7 41725108 0.74 1.0 17570 21734
chr19 41768401 41813503 + HNRNPUL1 ENSG00000105323.12 41768401 0.68 0.99 17571 65027
chr19 41807492 41859816 - TGFB1 ENSG00000105329.5 41859816 0.81 1.0 17572 44021
chr19 41816094 41830788 + CCDC97 ENSG00000142039.3 41816094 0.6 1.0 17573 87743
chr19 41856758 41930906 + CTC-435M10.3 ENSG00000255730.2 41856758 0.95 0.91 17574 47079
chr19 41856816 41889988 + TMEM91 ENSG00000142046.10 41856816 0.66 1.0 17575 47021
chr19 41860326 41870078 - B9D2 ENSG00000123810.3 41870078 0.68 1.0 17576 33759
chr19 41884215 41930910 + BCKDHA ENSG00000248098.6 41884215 0.71 0.87 17577 19622
chr19 41892279 41903384 - EXOSC5 ENSG00000077348.4 41903384 0.85 1.0 17578 453
Expression level of Genes
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miRNAs possibly regulated by vista29420[chr19:41803374-41803837]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results