EnhancerDB
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  3. vista29421[chr19:41804006-41804567]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29421[chr19:41804006-41804567]
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Tissue distribution of vista29421
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Transcription factor that possibly regulate vista29421[chr19:41804006-41804567]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 41804254 41804535 RUNX3 UCSC Txn Factor no Conserved 108410618
chr19 41804023 41804038 PRDM1 JASPAR yes 70848258
chr19 41804068 41804076 MEIS2 JASPAR yes 70848259
chr19 41804068 41804076 MEIS3 JASPAR yes 70848260
chr19 41804069 41804073 NFE TRANSFAC yes 70848261
chr19 41804069 41804083 CREB3 JASPAR yes 70848262
chr19 41804069 41804083 CREB3L1 JASPAR yes 70848263
chr19 41804070 41804085 JUND JASPAR yes 70848264
chr19 41804071 41804081 SREBF1 JASPAR yes 70848265
chr19 41804071 41804081 SREBF2 JASPAR yes 70848266
chr19 41804095 41804116 ZNF263 JASPAR yes 70848267
chr19 41804096 41804107 E2F6 JASPAR yes 70848268
chr19 41804103 41804114 E2F6 JASPAR yes 70848269
chr19 41804127 41804147 RREB1 JASPAR yes 70848270
chr19 41804136 41804142 MZF1 JASPAR yes 70848271
chr19 41804192 41804203 STAT1 JASPAR yes 70848272
chr19 41804214 41804218 YY1 TRANSFAC yes 70848273
chr19 41804216 41804233 BCL6B JASPAR yes 70848274
chr19 41804224 41804235 FOXH1 JASPAR yes 70848275
chr19 41804245 41804259 PLAG1 JASPAR yes 70848276
chr19 41804246 41804251 SP1 TRANSFAC yes 70848277
chr19 41804286 41804299 ZBTB18 JASPAR yes 70848278
chr19 41804287 41804297 MSC JASPAR yes 70848279
chr19 41804293 41804300 NFATC2 JASPAR yes 70848280
chr19 41804293 41804311 MAFF JASPAR yes 70848281
chr19 41804295 41804310 MAFK JASPAR yes 70848282
chr19 41804319 41804335 RFX2 JASPAR yes 70848283
chr19 41804319 41804335 RFX3 JASPAR yes 70848284
chr19 41804319 41804335 RFX5 JASPAR yes 70848285
chr19 41804320 41804339 RFX2 JASPAR yes 70848286
chr19 41804322 41804337 RFX5 JASPAR yes 70848287
chr19 41804327 41804340 SCRT2 JASPAR yes 70848288
chr19 41804330 41804343 ZBTB18 JASPAR yes 70848289
chr19 41804331 41804341 MSC JASPAR yes 70848290
chr19 41804331 41804341 MYF6 JASPAR yes 70848291
chr19 41804331 41804341 NHLH1 JASPAR yes 70848292
chr19 41804331 41804341 TFAP4 JASPAR yes 70848293
chr19 41804336 41804345 THAP1 JASPAR yes 70848294
chr19 41804344 41804358 GLIS2 JASPAR yes 70848295
chr19 41804351 41804363 ZBTB7A JASPAR yes 70848296
chr19 41804352 41804364 GLI2 JASPAR yes 70848297
chr19 41804352 41804364 ZBTB7C JASPAR yes 70848298
chr19 41804369 41804388 REST JASPAR yes 70848299
chr19 41804374 41804389 TFAP2A JASPAR yes 70848300
chr19 41804374 41804389 TFAP2C JASPAR yes 70848301
chr19 41804384 41804398 ATF7 JASPAR yes 70848302
chr19 41804385 41804400 JUND JASPAR yes 70848303
chr19 41804386 41804394 NR4A2 JASPAR yes 70848304
chr19 41804386 41804399 JUN JASPAR yes 70848305
chr19 41804387 41804395 CREB1 JASPAR yes 70848306
chr19 41804394 41804409 FOXA1 JASPAR yes 70848307
chr19 41804395 41804410 FOXP1 JASPAR yes 70848308
chr19 41804398 41804409 FOXA1 JASPAR yes 70848309
chr19 41804399 41804415 RFX3 JASPAR yes 70848310
chr19 41804399 41804415 RFX4 JASPAR yes 70848311
chr19 41804399 41804415 RFX5 JASPAR yes 70848312
chr19 41804400 41804419 RFX2 JASPAR yes 70848313
chr19 41804438 41804449 STAT1 JASPAR yes 70848314
chr19 41804444 41804454 RELA JASPAR yes 70848315
chr19 41804453 41804466 POU2F2 JASPAR yes 70848316
chr19 41804454 41804466 POU3F1 JASPAR yes 70848317
chr19 41804454 41804466 POU3F2 JASPAR yes 70848318
chr19 41804455 41804459 YY1 TRANSFAC yes 70848319
chr19 41804455 41804466 FOXA1 JASPAR yes 70848320
chr19 41804455 41804467 POU2F1 JASPAR yes 70848321
chr19 41804456 41804463 POU2F1 TRANSFAC yes 70848322
chr19 41804456 41804463 POU2F2C TRANSFAC yes 70848323
chr19 41804456 41804463 POU2F2 TRANSFAC yes 70848324
chr19 41804456 41804464 POU2F1 TRANSFAC yes 70848325
chr19 41804456 41804465 POU3F4 JASPAR yes 70848326
chr19 41804456 41804465 POU5F1B JASPAR yes 70848327
chr19 41804460 41804480 RREB1 JASPAR yes 70848328
chr19 41804461 41804465 YY1 TRANSFAC yes 70848329
chr19 41804467 41804482 RUNX2 JASPAR yes 70848330
chr19 41804472 41804481 RUNX2 JASPAR yes 70848331
chr19 41804498 41804504 MZF1 JASPAR yes 70848332
chr19 41804507 41804528 ZNF263 JASPAR yes 70848333
chr19 41804518 41804529 E2F6 JASPAR yes 70848334
SNP sites on vista29421[chr19:41804006-41804567]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29421[chr19:41804006-41804567]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 41725108 41767671 + AXL ENSG00000167601.7 41725108 0.74 1.0 17570 21102
chr19 41768401 41813503 + HNRNPUL1 ENSG00000105323.12 41768401 0.68 0.99 17571 64395
chr19 41807492 41859816 - TGFB1 ENSG00000105329.5 41859816 0.81 1.0 17572 44751
chr19 41816094 41830788 + CCDC97 ENSG00000142039.3 41816094 0.6 1.0 17573 88473
chr19 41856758 41930906 + CTC-435M10.3 ENSG00000255730.2 41856758 0.95 0.91 17574 47809
chr19 41856816 41889988 + TMEM91 ENSG00000142046.10 41856816 0.66 1.0 17575 47751
chr19 41860326 41870078 - B9D2 ENSG00000123810.3 41870078 0.68 1.0 17576 34489
chr19 41884215 41930910 + BCKDHA ENSG00000248098.6 41884215 0.71 0.87 17577 20352
chr19 41892279 41903384 - EXOSC5 ENSG00000077348.4 41903384 0.85 1.0 17578 1183
Expression level of Genes
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miRNAs possibly regulated by vista29421[chr19:41804006-41804567]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results