EnhancerDB
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  3. vista29425[chr19:41827649-41828097]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29425[chr19:41827649-41828097]
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Tissue distribution of vista29425
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Transcription factor that possibly regulate vista29425[chr19:41827649-41828097]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 41824317 41832774 POLR2A UCSC Txn Factor no Conserved 108410711
chr19 41824317 41832774 POLR2A UCSC Txn Factor no Conserved 108410712
chr19 41827643 41828057 CTCF UCSC Txn Factor no Conserved 108410727
chr19 41827703 41827933 RUNX3 UCSC Txn Factor no Conserved 108410739
chr19 41827912 41828172 TEAD4 UCSC Txn Factor no Conserved 108410763
chr19 41827940 41828189 NR2F2 UCSC Txn Factor no Conserved 108410767
chr19 41827636 41827651 HSF1 JASPAR yes 70848450
chr19 41827636 41827651 HSF1 JASPAR yes 113369690
chr19 41827637 41827657 PPARG JASPAR yes 70848451
chr19 41827637 41827657 PPARG JASPAR yes 113369691
chr19 41827666 41827687 ZNF263 JASPAR yes 70848452
chr19 41827666 41827687 ZNF263 JASPAR yes 113369692
chr19 41827667 41827671 LFA1 TRANSFAC yes 70848453
chr19 41827667 41827671 LFA1 TRANSFAC yes 113369693
chr19 41827685 41827701 GLIS1 JASPAR yes 70848454
chr19 41827685 41827701 GLIS1 JASPAR yes 113369694
chr19 41827685 41827704 CTCF JASPAR yes 70848455
chr19 41827685 41827704 CTCF JASPAR yes 113369695
chr19 41827695 41827709 PLAG1 JASPAR yes 70848456
chr19 41827695 41827709 PLAG1 JASPAR yes 113369696
chr19 41827737 41827756 RFX2 JASPAR yes 70848457
chr19 41827737 41827756 RFX2 JASPAR yes 113369697
chr19 41827742 41827751 NFIX JASPAR yes 70848458
chr19 41827742 41827751 NFIX JASPAR yes 113369698
chr19 41827743 41827749 NFIC JASPAR yes 70848459
chr19 41827743 41827749 NFIC JASPAR yes 113369699
chr19 41827776 41827791 TFAP2A JASPAR yes 70848460
chr19 41827776 41827791 TFAP2C JASPAR yes 70848461
chr19 41827776 41827791 TFAP2A JASPAR yes 113369700
chr19 41827776 41827791 TFAP2C JASPAR yes 113369701
chr19 41827778 41827793 TFAP2C JASPAR yes 70848462
chr19 41827778 41827793 TFAP2C JASPAR yes 113369702
chr19 41827779 41827791 TFAP2A JASPAR yes 70848463
chr19 41827779 41827791 TFAP2B JASPAR yes 70848464
chr19 41827779 41827791 TFAP2C JASPAR yes 70848465
chr19 41827779 41827791 TFAP2A JASPAR yes 113369703
chr19 41827779 41827791 TFAP2B JASPAR yes 113369704
chr19 41827779 41827791 TFAP2C JASPAR yes 113369705
chr19 41827786 41827790 LFA1 TRANSFAC yes 70848466
chr19 41827786 41827790 LFA1 TRANSFAC yes 113369706
chr19 41827792 41827796 LFA1 TRANSFAC yes 70848467
chr19 41827792 41827796 LFA1 TRANSFAC yes 113369707
chr19 41827793 41827803 MSC JASPAR yes 70848468
chr19 41827793 41827803 MYF6 JASPAR yes 70848469
chr19 41827793 41827803 MSC JASPAR yes 113369708
chr19 41827793 41827803 MYF6 JASPAR yes 113369709
chr19 41827798 41827802 NFE TRANSFAC yes 70848470
chr19 41827798 41827802 NFE TRANSFAC yes 113369710
chr19 41827802 41827817 RUNX2 JASPAR yes 70848471
chr19 41827802 41827817 RUNX2 JASPAR yes 113369711
chr19 41827811 41827815 ESR1 TRANSFAC yes 70848472
chr19 41827811 41827815 ESR1 TRANSFAC yes 113369712
chr19 41827822 41827831 PITX3 JASPAR yes 70848473
chr19 41827822 41827831 PITX3 JASPAR yes 113369713
chr19 41827822 41827832 GSC JASPAR yes 70848474
chr19 41827822 41827832 GSC JASPAR yes 113369714
chr19 41827823 41827831 OTX1 JASPAR yes 70848475
chr19 41827823 41827831 OTX1 JASPAR yes 113369715
chr19 41827836 41827840 NFE TRANSFAC yes 70848476
chr19 41827836 41827840 NFE TRANSFAC yes 113369716
chr19 41827837 41827842 GATA2 JASPAR yes 70848477
chr19 41827837 41827842 GATA2 JASPAR yes 113369717
chr19 41827837 41827856 CTCF JASPAR yes 70848478
chr19 41827837 41827856 CTCF JASPAR yes 113369718
chr19 41827838 41827844 ZNF354C JASPAR yes 70848479
chr19 41827838 41827844 ZNF354C JASPAR yes 113369719
chr19 41827848 41827852 LFA1 TRANSFAC yes 70848480
chr19 41827848 41827852 LFA1 TRANSFAC yes 113369720
chr19 41827866 41827881 JUND JASPAR yes 70848481
chr19 41827866 41827881 JUND JASPAR yes 113369721
chr19 41827867 41827880 JUN JASPAR yes 70848482
chr19 41827867 41827880 JUN JASPAR yes 113369722
chr19 41827868 41827882 ATF7 JASPAR yes 70848483
chr19 41827868 41827882 BATF3 JASPAR yes 70848484
chr19 41827868 41827882 CREB3 JASPAR yes 70848485
chr19 41827868 41827882 ATF7 JASPAR yes 113369723
chr19 41827868 41827882 BATF3 JASPAR yes 113369724
chr19 41827868 41827882 CREB3 JASPAR yes 113369725
chr19 41827869 41827881 JDP2 JASPAR yes 70848486
chr19 41827869 41827881 JDP2 JASPAR yes 113369726
chr19 41827869 41827883 XBP1 JASPAR yes 70848487
chr19 41827869 41827883 XBP1 JASPAR yes 113369727
chr19 41827869 41827889 TBX19 JASPAR yes 70848488
chr19 41827869 41827889 TBX19 JASPAR yes 113369728
chr19 41827871 41827876 ATF1 TRANSFAC yes 70848489
chr19 41827871 41827876 ATF1 TRANSFAC yes 113369729
chr19 41827871 41827879 CREB1 JASPAR yes 70848490
chr19 41827871 41827879 CREB1 JASPAR yes 113369730
chr19 41827873 41827878 ATF1 TRANSFAC yes 70848491
chr19 41827873 41827878 ATF1 TRANSFAC yes 113369731
chr19 41827890 41827903 TFAP2A JASPAR yes 70848492
chr19 41827890 41827903 TFAP2B JASPAR yes 70848493
chr19 41827890 41827903 TFAP2C JASPAR yes 70848494
chr19 41827890 41827903 TFAP2A JASPAR yes 113369732
chr19 41827890 41827903 TFAP2B JASPAR yes 113369733
chr19 41827890 41827903 TFAP2C JASPAR yes 113369734
chr19 41827898 41827902 LFA1 TRANSFAC yes 70848495
chr19 41827898 41827902 LFA1 TRANSFAC yes 113369735
chr19 41827911 41827921 NKX2-3 JASPAR yes 70848496
chr19 41827911 41827921 NKX2-3 JASPAR yes 113369736
chr19 41827922 41827928 LEF1 TRANSFAC yes 70848497
chr19 41827922 41827928 SOX10 JASPAR yes 70848498
chr19 41827922 41827928 LEF1 TRANSFAC yes 113369737
chr19 41827922 41827928 SOX10 JASPAR yes 113369738
chr19 41827962 41827975 ZBED1 JASPAR yes 70848499
chr19 41827962 41827975 ZBED1 JASPAR yes 113369739
chr19 41827963 41827976 ZBED1 JASPAR yes 70848500
chr19 41827963 41827976 ZBED1 JASPAR yes 113369740
chr19 41827972 41827976 YY1 TRANSFAC yes 70848501
chr19 41827972 41827976 YY1 TRANSFAC yes 113369741
chr19 41827977 41827987 MSC JASPAR yes 70848502
chr19 41827977 41827987 MSC JASPAR yes 113369742
chr19 41828008 41828023 MEF2C JASPAR yes 70848503
chr19 41828008 41828023 MEF2C JASPAR yes 113369743
chr19 41828030 41828036 SOX10 JASPAR yes 70848504
chr19 41828030 41828036 SOX10 JASPAR yes 113369744
chr19 41828042 41828054 TEAD1 JASPAR yes 70848505
chr19 41828042 41828054 TEAD1 JASPAR yes 113369745
chr19 41828044 41828054 TEAD1 JASPAR yes 70848506
chr19 41828044 41828054 TEAD4 JASPAR yes 70848507
chr19 41828044 41828054 TEAD1 JASPAR yes 113369746
chr19 41828044 41828054 TEAD4 JASPAR yes 113369747
chr19 41828045 41828053 TEAD3 JASPAR yes 70848508
chr19 41828045 41828053 TEF-1 TRANSFAC yes 70848509
chr19 41828045 41828053 TEAD3 JASPAR yes 113369748
chr19 41828045 41828053 TEF-1 TRANSFAC yes 113369749
chr19 41828079 41828097 RARA JASPAR yes 70848510
chr19 41828079 41828097 RARA JASPAR yes 113369750
SNP sites on vista29425[chr19:41827649-41828097]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29425[chr19:41827649-41828097]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 41768401 41813503 + HNRNPUL1 ENSG00000105323.12 41768401 0.68 0.99 17571 40752
chr19 41807492 41859816 - TGFB1 ENSG00000105329.5 41859816 0.81 1.0 17572 68281
chr19 41816094 41830788 + CCDC97 ENSG00000142039.3 41816094 0.6 1.0 17573 88445
chr19 41856758 41930906 + CTC-435M10.3 ENSG00000255730.2 41856758 0.95 0.91 17574 71339
chr19 41856816 41889988 + TMEM91 ENSG00000142046.10 41856816 0.66 1.0 17575 71281
chr19 41860326 41870078 - B9D2 ENSG00000123810.3 41870078 0.68 1.0 17576 58019
chr19 41884215 41930910 + BCKDHA ENSG00000248098.6 41884215 0.71 0.87 17577 43882
chr19 41892279 41903384 - EXOSC5 ENSG00000077348.4 41903384 0.85 1.0 17578 24713
Expression level of Genes
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miRNAs possibly regulated by vista29425[chr19:41827649-41828097]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results