EnhancerDB
  1. Home
  2. Enhancers
  3. vista29427[chr19:41834727-41835191]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29427[chr19:41834727-41835191]
Back to top
Tissue distribution of vista29427
Back to top
Transcription factor that possibly regulate vista29427[chr19:41834727-41835191]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 41833006 41834939 POLR2A UCSC Txn Factor no Conserved 108410794
chr19 41834811 41835059 SPI1 UCSC Txn Factor no Conserved 108410798
chr19 41834731 41834752 ZNF263 JASPAR yes 70848633
chr19 41834731 41834752 ZNF263 JASPAR yes 113370801
chr19 41834736 41834742 MZF1 JASPAR yes 70848634
chr19 41834736 41834742 MZF1 JASPAR yes 113370802
chr19 41834753 41834768 FOXA1 JASPAR yes 70848635
chr19 41834753 41834768 FOXA1 JASPAR yes 113370803
chr19 41834757 41834768 FOXA1 JASPAR yes 70848636
chr19 41834757 41834768 FOXA1 JASPAR yes 113370804
chr19 41834787 41834790 MYB TRANSFAC yes 70848637
chr19 41834787 41834790 MYB TRANSFAC yes 113370805
chr19 41834787 41834798 RUNX1 JASPAR yes 70848638
chr19 41834787 41834798 RUNX1 JASPAR yes 113370806
chr19 41834793 41834797 YY1 TRANSFAC yes 70848639
chr19 41834793 41834797 YY1 TRANSFAC yes 113370807
chr19 41834816 41834822 MAZ TRANSFAC yes 70848640
chr19 41834816 41834822 MAZ TRANSFAC yes 113370808
chr19 41834816 41834827 NFKB1 JASPAR yes 70848641
chr19 41834816 41834827 NFKB1 JASPAR yes 113370809
chr19 41834828 41834832 H4TF2 TRANSFAC yes 70848642
chr19 41834828 41834832 H4TF2 TRANSFAC yes 113370810
chr19 41834828 41834848 ESR1 JASPAR yes 70848643
chr19 41834828 41834848 ESR1 JASPAR yes 113370811
chr19 41834829 41834844 RFX5 JASPAR yes 70848644
chr19 41834829 41834844 RFX5 JASPAR yes 113370812
chr19 41834853 41834859 NFIC JASPAR yes 70848645
chr19 41834853 41834859 NFIC JASPAR yes 113370813
chr19 41834857 41834867 MSC JASPAR yes 70848646
chr19 41834857 41834867 MSC JASPAR yes 113370814
chr19 41834867 41834876 HIC2 JASPAR yes 70848647
chr19 41834867 41834876 HIC2 JASPAR yes 113370815
chr19 41834868 41834880 TFAP2A JASPAR yes 70848648
chr19 41834868 41834880 TFAP2B JASPAR yes 70848649
chr19 41834868 41834880 TFAP2C JASPAR yes 70848650
chr19 41834868 41834880 TFAP2A JASPAR yes 113370816
chr19 41834868 41834880 TFAP2B JASPAR yes 113370817
chr19 41834868 41834880 TFAP2C JASPAR yes 113370818
chr19 41834868 41834883 TFAP2A JASPAR yes 70848651
chr19 41834868 41834883 TFAP2A JASPAR yes 113370819
chr19 41834880 41834885 ETS2 TRANSFAC yes 70848652
chr19 41834880 41834885 ETS2 TRANSFAC yes 113370820
chr19 41834892 41834913 ZNF263 JASPAR yes 70848653
chr19 41834892 41834913 ZNF263 JASPAR yes 113370821
chr19 41834893 41834908 AR JASPAR yes 70848654
chr19 41834893 41834908 AR JASPAR yes 113370822
chr19 41834900 41834904 NFE TRANSFAC yes 70848655
chr19 41834900 41834904 NFE TRANSFAC yes 113370823
chr19 41834904 41834912 EHF JASPAR yes 70848656
chr19 41834904 41834912 EHF JASPAR yes 113370824
chr19 41834929 41834950 IRF1 JASPAR yes 70848657
chr19 41834929 41834950 IRF1 JASPAR yes 113370825
chr19 41834930 41834950 PPARG JASPAR yes 70848658
chr19 41834930 41834950 PPARG JASPAR yes 113370826
chr19 41834931 41834936 TFAP2A TRANSFAC yes 70848659
chr19 41834931 41834936 TFAP2A TRANSFAC yes 113370827
chr19 41834931 41834937 MZF1 JASPAR yes 70848660
chr19 41834931 41834937 MZF1 JASPAR yes 113370828
chr19 41834933 41834938 ETS2 TRANSFAC yes 70848661
chr19 41834933 41834938 ETS2 TRANSFAC yes 113370829
chr19 41834933 41834947 STAT1 JASPAR yes 70848662
chr19 41834933 41834947 STAT1 JASPAR yes 113370830
chr19 41834933 41834948 PRDM1 JASPAR yes 70848663
chr19 41834933 41834948 STAT2 JASPAR yes 70848664
chr19 41834933 41834948 PRDM1 JASPAR yes 113370831
chr19 41834933 41834948 STAT2 JASPAR yes 113370832
chr19 41834933 41834951 IRF2 JASPAR yes 70848665
chr19 41834933 41834951 IRF2 JASPAR yes 113370833
chr19 41834934 41834946 IRF1 JASPAR yes 70848666
chr19 41834934 41834946 IRF1 JASPAR yes 113370834
chr19 41834953 41834968 STAT2 JASPAR yes 70848667
chr19 41834953 41834968 STAT2 JASPAR yes 113370835
chr19 41834955 41834976 IRF1 JASPAR yes 70848668
chr19 41834955 41834976 IRF1 JASPAR yes 113370836
chr19 41834967 41834988 ZNF263 JASPAR yes 70848669
chr19 41834967 41834988 ZNF263 JASPAR yes 113370837
chr19 41834968 41834989 ZNF263 JASPAR yes 70848670
chr19 41834968 41834989 ZNF263 JASPAR yes 113370838
chr19 41834972 41834993 IRF1 JASPAR yes 70848671
chr19 41834972 41834993 IRF1 JASPAR yes 113370839
chr19 41834974 41834995 ZNF263 JASPAR yes 70848672
chr19 41834974 41834995 ZNF263 JASPAR yes 113370840
chr19 41834976 41834990 SPI1 JASPAR yes 70848673
chr19 41834976 41834990 SPIC JASPAR yes 70848674
chr19 41834976 41834990 SPI1 JASPAR yes 113370841
chr19 41834976 41834990 SPIC JASPAR yes 113370842
chr19 41834977 41834990 ELF1 JASPAR yes 70848675
chr19 41834977 41834990 ELF1 JASPAR yes 113370843
chr19 41834977 41834998 ZNF263 JASPAR yes 70848676
chr19 41834977 41834998 ZNF263 JASPAR yes 113370844
chr19 41834979 41834990 ELF5 JASPAR yes 70848677
chr19 41834979 41834990 ELF5 JASPAR yes 113370845
chr19 41834980 41834987 SPIB JASPAR yes 70848678
chr19 41834980 41834987 SPIB JASPAR yes 113370846
chr19 41834980 41834991 FLI1 JASPAR yes 70848679
chr19 41834980 41834991 FLI1 JASPAR yes 113370847
chr19 41835022 41835027 ETS2 TRANSFAC yes 70848680
chr19 41835022 41835027 ETS2 TRANSFAC yes 113370848
chr19 41835026 41835032 HiNF-A TRANSFAC yes 70848681
chr19 41835026 41835032 HiNF-A TRANSFAC yes 113370849
chr19 41835029 41835050 ZNF263 JASPAR yes 70848682
chr19 41835029 41835050 ZNF263 JASPAR yes 113370850
chr19 41835033 41835052 CTCF JASPAR yes 70848683
chr19 41835033 41835052 CTCF JASPAR yes 113370851
chr19 41835049 41835058 ZEB1 JASPAR yes 70848684
chr19 41835049 41835058 ZEB1 JASPAR yes 113370852
chr19 41835049 41835064 SCRT1 JASPAR yes 70848685
chr19 41835049 41835064 SCRT1 JASPAR yes 113370853
chr19 41835050 41835060 FIGLA JASPAR yes 70848686
chr19 41835050 41835060 TCF3 JASPAR yes 70848687
chr19 41835050 41835060 TCF4 JASPAR yes 70848688
chr19 41835050 41835060 FIGLA JASPAR yes 113370854
chr19 41835050 41835060 TCF3 JASPAR yes 113370855
chr19 41835050 41835060 TCF4 JASPAR yes 113370856
chr19 41835051 41835060 SNAI2 JASPAR yes 70848689
chr19 41835051 41835060 SNAI2 JASPAR yes 113370857
chr19 41835051 41835064 SCRT2 JASPAR yes 70848690
chr19 41835051 41835064 SCRT2 JASPAR yes 113370858
chr19 41835052 41835057 USF2 TRANSFAC yes 70848691
chr19 41835052 41835057 USF2 TRANSFAC yes 113370859
chr19 41835058 41835070 PKNOX2 JASPAR yes 70848692
chr19 41835058 41835070 PKNOX2 JASPAR yes 113370860
chr19 41835068 41835072 YY1 TRANSFAC yes 70848693
chr19 41835068 41835072 YY1 TRANSFAC yes 113370861
chr19 41835079 41835091 TAL1 JASPAR yes 70848694
chr19 41835079 41835091 TAL1 JASPAR yes 113370862
chr19 41835081 41835091 FIGLA JASPAR yes 70848695
chr19 41835081 41835091 MSC JASPAR yes 70848696
chr19 41835081 41835091 MYF6 JASPAR yes 70848697
chr19 41835081 41835091 TFAP4 JASPAR yes 70848698
chr19 41835081 41835091 FIGLA JASPAR yes 113370863
chr19 41835081 41835091 MSC JASPAR yes 113370864
chr19 41835081 41835091 MYF6 JASPAR yes 113370865
chr19 41835081 41835091 TFAP4 JASPAR yes 113370866
chr19 41835081 41835093 TAL1 JASPAR yes 70848699
chr19 41835081 41835093 TAL1 JASPAR yes 113370867
chr19 41835088 41835103 AR JASPAR yes 70848700
chr19 41835088 41835103 AR JASPAR yes 113370868
chr19 41835091 41835095 NFE TRANSFAC yes 70848701
chr19 41835091 41835095 NFE TRANSFAC yes 113370869
chr19 41835093 41835113 ESR1 JASPAR yes 70848702
chr19 41835093 41835113 ESR1 JASPAR yes 113370870
chr19 41835096 41835113 RXRA JASPAR yes 70848703
chr19 41835096 41835113 RXRA JASPAR yes 113370871
chr19 41835121 41835125 NFE TRANSFAC yes 70848704
chr19 41835121 41835125 NFE TRANSFAC yes 113370872
chr19 41835147 41835159 HINFP JASPAR yes 70848705
chr19 41835147 41835159 HINFP JASPAR yes 113370873
chr19 41835165 41835176 ESRRB JASPAR yes 70848706
chr19 41835165 41835176 ESRRB JASPAR yes 113370874
chr19 41835169 41835173 ESR1 TRANSFAC yes 70848707
chr19 41835169 41835173 ESR1 TRANSFAC yes 113370875
chr19 41835174 41835189 SOX21 JASPAR yes 70848708
chr19 41835174 41835189 SOX21 JASPAR yes 113370876
chr19 41835174 41835190 SOX4 JASPAR yes 70848709
chr19 41835174 41835190 SOX4 JASPAR yes 113370877
chr19 41835190 41835194 NFE TRANSFAC yes 70848710
chr19 41835190 41835194 NFE TRANSFAC yes 113370878
SNP sites on vista29427[chr19:41834727-41835191]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29427[chr19:41834727-41835191]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 41768401 41813503 + HNRNPUL1 ENSG00000105323.12 41768401 0.68 0.99 17571 33674
chr19 41807492 41859816 - TGFB1 ENSG00000105329.5 41859816 0.81 1.0 17572 75375
chr19 41816094 41830788 + CCDC97 ENSG00000142039.3 41816094 0.6 1.0 17573 81367
chr19 41856758 41930906 + CTC-435M10.3 ENSG00000255730.2 41856758 0.95 0.91 17574 78433
chr19 41856816 41889988 + TMEM91 ENSG00000142046.10 41856816 0.66 1.0 17575 78375
chr19 41860326 41870078 - B9D2 ENSG00000123810.3 41870078 0.68 1.0 17576 65113
chr19 41884215 41930910 + BCKDHA ENSG00000248098.6 41884215 0.71 0.87 17577 50976
chr19 41892279 41903384 - EXOSC5 ENSG00000077348.4 41903384 0.85 1.0 17578 31807
chr19 41931264 41934635 - B3GNT8 ENSG00000177191.2 41934635 0.84 1.0 17579 556
Expression level of Genes
Back to top
miRNAs possibly regulated by vista29427[chr19:41834727-41835191]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results