EnhancerDB
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  3. vista29433[chr19:42033050-42033361]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29433[chr19:42033050-42033361]
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Tissue distribution of vista29433
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Transcription factor that possibly regulate vista29433[chr19:42033050-42033361]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42033081 42033088 NKX3-1 JASPAR yes 70848928
chr19 42033091 42033105 SPI1 JASPAR yes 70848929
chr19 42033091 42033105 SPIC JASPAR yes 70848930
chr19 42033097 42033101 LFA1 TRANSFAC yes 70848931
chr19 42033104 42033116 FOXI1 JASPAR yes 70848932
chr19 42033108 42033120 FOXI1 JASPAR yes 70848933
chr19 42033114 42033128 ONECUT3 JASPAR yes 70848934
chr19 42033118 42033132 POU4F1 JASPAR yes 70848935
chr19 42033123 42033137 SPI1 JASPAR yes 70848936
chr19 42033137 42033152 SOX21 JASPAR yes 70848937
chr19 42033139 42033143 YY1 TRANSFAC yes 70848938
chr19 42033142 42033146 TEAD2 TRANSFAC yes 70848939
chr19 42033143 42033151 DLX6 JASPAR yes 70848940
chr19 42033143 42033151 MSX2 JASPAR yes 70848941
chr19 42033188 42033192 LFA1 TRANSFAC yes 70848942
chr19 42033197 42033207 NFIA JASPAR yes 70848943
chr19 42033199 42033205 NFIC JASPAR yes 70848944
chr19 42033201 42033205 H1TF2 TRANSFAC yes 70848945
chr19 42033201 42033205 NFE TRANSFAC yes 70848946
chr19 42033201 42033205 SRF TRANSFAC yes 70848947
chr19 42033201 42033211 HOXA13 JASPAR yes 70848948
chr19 42033201 42033211 HOXB13 JASPAR yes 70848949
chr19 42033201 42033211 HOXD13 JASPAR yes 70848950
chr19 42033223 42033229 HiNF-A TRANSFAC yes 70848951
chr19 42033232 42033242 TEAD1 JASPAR yes 70848952
chr19 42033232 42033242 TEAD4 JASPAR yes 70848953
chr19 42033258 42033276 SRF JASPAR yes 70848954
chr19 42033269 42033274 ETS2 TRANSFAC yes 70848955
chr19 42033290 42033304 ONECUT3 JASPAR yes 70848956
chr19 42033292 42033310 NFYA JASPAR yes 70848957
chr19 42033296 42033300 H1TF2 TRANSFAC yes 70848958
chr19 42033296 42033300 NFE TRANSFAC yes 70848959
chr19 42033296 42033300 SRF TRANSFAC yes 70848960
chr19 42033297 42033312 HNF1A JASPAR yes 70848961
chr19 42033298 42033311 HNF1B JASPAR yes 70848962
chr19 42033303 42033310 NKX3-1 JASPAR yes 70848963
chr19 42033307 42033310 MYB TRANSFAC yes 70848964
chr19 42033314 42033319 MYB TRANSFAC yes 70848965
chr19 42033321 42033335 FOXF2 JASPAR yes 70848966
chr19 42033324 42033335 FOXP2 JASPAR yes 70848967
chr19 42033324 42033336 FOXI1 JASPAR yes 70848968
chr19 42033346 42033356 REL JASPAR yes 70848969
chr19 42033351 42033360 TFAP2A JASPAR yes 70848970
chr19 42033355 42033360 SP1 TRANSFAC yes 70848971
SNP sites on vista29433[chr19:42033050-42033361]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29433[chr19:42033050-42033361]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 41931264 41934635 - B3GNT8 ENSG00000177191.2 41934635 0.84 1.0 17579 1585
chr19 41937223 41946622 - ATP5SL ENSG00000105341.14 41946622 0.62 1.0 17580 13572
chr19 41949063 41950670 + C19orf69 ENSG00000204978.2 41949063 0.96 0.98 17581 16013
chr19 42055886 42093197 + CEACAM21 ENSG00000007129.13 42055886 0.94 0.98 17582 77475
Expression level of Genes
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miRNAs possibly regulated by vista29433[chr19:42033050-42033361]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results