EnhancerDB
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  3. vista29436[chr19:42052659-42053071]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29436[chr19:42052659-42053071]
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Tissue distribution of vista29436
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Transcription factor that possibly regulate vista29436[chr19:42052659-42053071]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42052756 42052978 SPI1 UCSC Txn Factor no Conserved 108410995
chr19 42052671 42052679 NR4A2 JASPAR yes 70849178
chr19 42052671 42052685 RORA JASPAR yes 70849179
chr19 42052672 42052682 RORA JASPAR yes 70849180
chr19 42052678 42052682 YY1 TRANSFAC yes 70849181
chr19 42052700 42052710 TBX21 JASPAR yes 70849182
chr19 42052722 42052737 FOXP1 JASPAR yes 70849183
chr19 42052726 42052734 FOXO3 JASPAR yes 70849184
chr19 42052752 42052773 REST JASPAR yes 70849185
chr19 42052760 42052779 REST JASPAR yes 70849186
chr19 42052773 42052779 MZF1 JASPAR yes 70849187
chr19 42052778 42052798 ESR1 JASPAR yes 70849188
chr19 42052803 42052813 SP1 JASPAR yes 70849189
chr19 42052804 42052819 TFAP2C JASPAR yes 70849190
chr19 42052806 42052818 INSM1 JASPAR yes 70849191
chr19 42052806 42052821 TFAP2A JASPAR yes 70849192
chr19 42052807 42052818 TFAP2A JASPAR yes 70849193
chr19 42052807 42052818 TFAP2B JASPAR yes 70849194
chr19 42052808 42052817 TFAP2A JASPAR yes 70849195
chr19 42052837 42052853 ZNF143 JASPAR yes 70849196
chr19 42052850 42052859 THAP1 JASPAR yes 70849197
chr19 42052862 42052873 ELK4 JASPAR yes 70849198
chr19 42052862 42052873 FLI1 JASPAR yes 70849199
chr19 42052863 42052873 ETV6 JASPAR yes 70849200
chr19 42052863 42052873 GABPA JASPAR yes 70849201
chr19 42052863 42052876 ELF1 JASPAR yes 70849202
chr19 42052864 42052871 SPI1 JASPAR yes 70849203
chr19 42052864 42052872 EHF JASPAR yes 70849204
chr19 42052866 42052873 SPIB JASPAR yes 70849205
chr19 42052887 42052898 TFAP2C JASPAR yes 70849206
chr19 42052908 42052920 ZBTB7B JASPAR yes 70849207
chr19 42052908 42052920 ZBTB7C JASPAR yes 70849208
chr19 42052926 42052947 ZNF263 JASPAR yes 70849209
chr19 42052928 42052935 SPIB JASPAR yes 70849210
chr19 42052931 42052942 E2F6 JASPAR yes 70849211
chr19 42052950 42052955 H4TF1 TRANSFAC yes 70849212
chr19 42052963 42052974 DUX4 JASPAR yes 70849213
chr19 42052973 42052976 MYB TRANSFAC yes 70849214
chr19 42052973 42052990 RARA JASPAR yes 70849215
chr19 42052973 42052990 RXRA JASPAR yes 70849216
chr19 42052978 42052993 PRDM1 JASPAR yes 70849217
chr19 42052984 42052998 RXRG JASPAR yes 70849218
chr19 42052984 42052999 HNF4G JASPAR yes 70849219
chr19 42052984 42052999 NR2C2 JASPAR yes 70849220
chr19 42052988 42052994 SOX10 JASPAR yes 70849221
chr19 42053005 42053008 MYB TRANSFAC yes 70849222
chr19 42053011 42053024 EOMES JASPAR yes 70849223
chr19 42053013 42053023 TBR1 JASPAR yes 70849224
chr19 42053013 42053024 TBX2 JASPAR yes 70849225
chr19 42053014 42053024 TBX21 JASPAR yes 70849226
chr19 42053015 42053023 TBX15 JASPAR yes 70849227
chr19 42053015 42053023 TBX1 JASPAR yes 70849228
chr19 42053015 42053023 TBX4 JASPAR yes 70849229
chr19 42053015 42053023 TBX5 JASPAR yes 70849230
chr19 42053018 42053037 CTCF JASPAR yes 70849231
chr19 42053031 42053048 RARA JASPAR yes 70849232
chr19 42053035 42053047 HLF JASPAR yes 70849233
chr19 42053035 42053047 JDP2 JASPAR yes 70849234
chr19 42053042 42053045 MYB TRANSFAC yes 70849235
chr19 42053043 42053058 TFAP2A JASPAR yes 70849236
chr19 42053043 42053058 TFAP2C JASPAR yes 70849237
chr19 42053044 42053055 TFAP2A JASPAR yes 70849238
chr19 42053044 42053055 TFAP2B JASPAR yes 70849239
chr19 42053044 42053055 TFAP2C JASPAR yes 70849240
chr19 42053045 42053054 TFAP2A JASPAR yes 70849241
SNP sites on vista29436[chr19:42052659-42053071]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29436[chr19:42052659-42053071]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42055886 42093197 + CEACAM21 ENSG00000007129.13 42055886 0.94 0.98 17582 97185
chr19 42125344 42133442 - CEACAM4 ENSG00000105352.6 42133442 0.98 0.0 17583 19629
Expression level of Genes
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miRNAs possibly regulated by vista29436[chr19:42052659-42053071]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results