EnhancerDB
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  3. vista29437[chr19:42069848-42070019]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29437[chr19:42069848-42070019]
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Tissue distribution of vista29437
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Transcription factor that possibly regulate vista29437[chr19:42069848-42070019]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42069762 42070130 CTCF UCSC Txn Factor no Conserved 108411029
chr19 42069801 42070095 SMC3 UCSC Txn Factor no Conserved 108411035
chr19 42069815 42070056 RAD21 UCSC Txn Factor no Conserved 108411045
chr19 42069816 42070112 HNF4A UCSC Txn Factor no Conserved 108411047
chr19 42069850 42069854 H4TF2 TRANSFAC yes 70849242
chr19 42069850 42069854 H4TF2 TRANSFAC yes 113380745
chr19 42069875 42069886 ESRRA JASPAR yes 70849243
chr19 42069875 42069886 ESRRB JASPAR yes 70849244
chr19 42069875 42069886 ESRRA JASPAR yes 113380746
chr19 42069875 42069886 ESRRB JASPAR yes 113380747
chr19 42069890 42069904 STAT1 JASPAR yes 70849245
chr19 42069890 42069904 STAT1 JASPAR yes 113380748
chr19 42069904 42069918 NR2F1 JASPAR yes 70849246
chr19 42069904 42069918 NR2F1 JASPAR yes 113380749
chr19 42069904 42069919 HNF4A JASPAR yes 70849247
chr19 42069904 42069919 HNF4A JASPAR yes 113380750
chr19 42069929 42069934 SP1 TRANSFAC yes 70849248
chr19 42069929 42069934 SP1 TRANSFAC yes 113380751
chr19 42069933 42069937 ESR1 TRANSFAC yes 70849249
chr19 42069933 42069937 ESR1 TRANSFAC yes 113380752
chr19 42069939 42069950 NFKB1 JASPAR yes 70849250
chr19 42069939 42069950 NFKB1 JASPAR yes 113380753
chr19 42069940 42069959 CTCF JASPAR yes 70849251
chr19 42069940 42069959 CTCF JASPAR yes 113380754
chr19 42069960 42069970 NFATC3 JASPAR yes 70849252
chr19 42069960 42069970 NFATC3 JASPAR yes 113380755
chr19 42069962 42069969 NFATC2 JASPAR yes 70849253
chr19 42069962 42069969 NFATC2 JASPAR yes 113380756
chr19 42069976 42069986 NFATC3 JASPAR yes 70849254
chr19 42069976 42069986 NFATC3 JASPAR yes 113380757
chr19 42069978 42069984 ETS1 JASPAR yes 70849255
chr19 42069978 42069984 ETS1 JASPAR yes 113380758
chr19 42069979 42069990 NFKB1 JASPAR yes 70849256
chr19 42069979 42069990 NFKB1 JASPAR yes 113380759
chr19 42069996 42070001 SP1 TRANSFAC yes 70849257
chr19 42069996 42070001 SP1 TRANSFAC yes 113380760
chr19 42069998 42070008 HINFP JASPAR yes 70849258
chr19 42069998 42070008 HINFP JASPAR yes 113380761
chr19 42069998 42070013 HNF4A JASPAR yes 70849259
chr19 42069998 42070013 HNF4A JASPAR yes 113380762
chr19 42069999 42070014 HNF4G JASPAR yes 70849260
chr19 42069999 42070014 HNF4G JASPAR yes 113380763
chr19 42070013 42070032 REST JASPAR yes 70849261
chr19 42070013 42070032 REST JASPAR yes 113380764
SNP sites on vista29437[chr19:42069848-42070019]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29437[chr19:42069848-42070019]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42055886 42093197 + CEACAM21 ENSG00000007129.13 42055886 0.94 0.98 17582 86038
chr19 42125344 42133442 - CEACAM4 ENSG00000105352.6 42133442 0.98 0.0 17583 36577
Expression level of Genes
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miRNAs possibly regulated by vista29437[chr19:42069848-42070019]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results