EnhancerDB
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  3. vista29441[chr19:42289644-42289819]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29441[chr19:42289644-42289819]
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Tissue distribution of vista29441
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Transcription factor that possibly regulate vista29441[chr19:42289644-42289819]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42289470 42289849 CTCF UCSC Txn Factor no Conserved 108411098
chr19 42289504 42289800 RAD21 UCSC Txn Factor no Conserved 108411101
chr19 42289657 42289676 CTCF JASPAR yes 70849399
chr19 42289657 42289676 CTCF JASPAR yes 113390626
chr19 42289687 42289696 NKX3-2 JASPAR yes 70849400
chr19 42289687 42289696 NKX3-2 JASPAR yes 113390627
chr19 42289687 42289697 NKX2-3 JASPAR yes 70849401
chr19 42289687 42289697 NKX2-3 JASPAR yes 113390628
chr19 42289688 42289696 ISL2 JASPAR yes 70849402
chr19 42289688 42289696 ISL2 JASPAR yes 113390629
chr19 42289693 42289696 MYB TRANSFAC yes 70849403
chr19 42289693 42289696 MYB TRANSFAC yes 113390630
chr19 42289722 42289732 SP1 JASPAR yes 70849404
chr19 42289722 42289732 SP1 JASPAR yes 113390631
chr19 42289738 42289748 SP1 JASPAR yes 70849405
chr19 42289738 42289748 SP1 JASPAR yes 113390632
chr19 42289739 42289743 LFA1 TRANSFAC yes 70849406
chr19 42289739 42289743 LFA1 TRANSFAC yes 113390633
chr19 42289750 42289757 SPI1 JASPAR yes 70849407
chr19 42289750 42289757 SPI1 JASPAR yes 113390634
chr19 42289769 42289784 JUND JASPAR yes 70849408
chr19 42289769 42289784 JUND JASPAR yes 113390635
chr19 42289770 42289783 JUN JASPAR yes 70849409
chr19 42289770 42289783 JUN JASPAR yes 113390636
chr19 42289790 42289793 MYB TRANSFAC yes 70849410
chr19 42289790 42289793 MYB TRANSFAC yes 113390637
chr19 42289790 42289806 GLIS1 JASPAR yes 70849411
chr19 42289790 42289806 GLIS1 JASPAR yes 113390638
chr19 42289793 42289798 SP1 TRANSFAC yes 70849412
chr19 42289793 42289798 SP1 TRANSFAC yes 113390639
chr19 42289793 42289805 GLI2 JASPAR yes 70849413
chr19 42289793 42289805 GLI2 JASPAR yes 113390640
chr19 42289799 42289805 SOX10 JASPAR yes 70849414
chr19 42289799 42289805 SOX10 JASPAR yes 113390641
chr19 42289805 42289815 ETV3 JASPAR yes 70849415
chr19 42289805 42289815 ETV3 JASPAR yes 113390642
chr19 42289813 42289816 MYB TRANSFAC yes 70849416
chr19 42289813 42289816 MYB TRANSFAC yes 113390643
chr19 42289816 42289820 NFE TRANSFAC yes 70849417
chr19 42289816 42289820 NFE TRANSFAC yes 113390644
SNP sites on vista29441[chr19:42289644-42289819]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29441[chr19:42289644-42289819]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42177235 42210895 - CEACAM7 ENSG00000007306.10 42210895 0.99 1.0 17584 21251
chr19 42212504 42233718 + CEACAM5 ENSG00000105388.10 42212504 0.97 0.96 17585 22860
chr19 42212531 42265190 + CEA ENSG00000267881.1 42212531 0.0 0.96 17586 22887
chr19 42254885 42276113 + CEACAM6 ENSG00000086548.8 42254885 0.98 0.99 17587 65241
chr19 42300369 42315591 + CEACAM3 ENSG00000170956.12 42300369 0.96 0.99 17588 89450
chr19 42341148 42348760 - LYPD4 ENSG00000183103.6 42348760 0.9 1.0 17589 41059
chr19 42348806 42356401 + DMRTC2 ENSG00000142025.11 42348806 0.93 0.98 17590 41013
chr19 42363988 42376994 + RPS19 ENSG00000105372.2 42363988 0.8 1.0 17591 25831
chr19 42381190 42385439 + CD79A ENSG00000105369.5 42381190 0.96 0.92 17592 8629
chr19 42387228 42434302 + ARHGEF1 ENSG00000076928.13 42387228 0.84 1.0 17593 2591
Expression level of Genes
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miRNAs possibly regulated by vista29441[chr19:42289644-42289819]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results