EnhancerDB
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  3. vista29442[chr19:42303520-42303673]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29442[chr19:42303520-42303673]
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Tissue distribution of vista29442
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Transcription factor that possibly regulate vista29442[chr19:42303520-42303673]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42303527 42303538 E2F6 JASPAR yes 70849418
chr19 42303534 42303546 NHLH1 JASPAR yes 70849419
chr19 42303539 42303558 PAX5 JASPAR yes 70849420
chr19 42303550 42303559 THAP1 JASPAR yes 70849421
chr19 42303578 42303591 ZBTB18 JASPAR yes 70849422
chr19 42303580 42303594 CREB3L1 JASPAR yes 70849423
chr19 42303610 42303615 GATA2 JASPAR yes 70849424
chr19 42303621 42303627 MZF1 JASPAR yes 70849425
chr19 42303621 42303641 RREB1 JASPAR yes 70849426
chr19 42303621 42303642 ZNF263 JASPAR yes 70849427
chr19 42303622 42303636 PLAG1 JASPAR yes 70849428
chr19 42303627 42303637 TBX21 JASPAR yes 70849429
chr19 42303628 42303636 MGA JASPAR yes 70849430
chr19 42303628 42303636 TBX15 JASPAR yes 70849431
chr19 42303628 42303636 TBX1 JASPAR yes 70849432
chr19 42303628 42303636 TBX4 JASPAR yes 70849433
chr19 42303628 42303636 TBX5 JASPAR yes 70849434
chr19 42303653 42303666 SMAD2 JASPAR yes 70849435
SNP sites on vista29442[chr19:42303520-42303673]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29442[chr19:42303520-42303673]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42177235 42210895 - CEACAM7 ENSG00000007306.10 42210895 0.99 1.0 17584 7375
chr19 42212504 42233718 + CEACAM5 ENSG00000105388.10 42212504 0.97 0.96 17585 8984
chr19 42212531 42265190 + CEA ENSG00000267881.1 42212531 0.0 0.96 17586 9011
chr19 42254885 42276113 + CEACAM6 ENSG00000086548.8 42254885 0.98 0.99 17587 51365
chr19 42300369 42315591 + CEACAM3 ENSG00000170956.12 42300369 0.96 0.99 17588 96849
chr19 42341148 42348760 - LYPD4 ENSG00000183103.6 42348760 0.9 1.0 17589 54913
chr19 42348806 42356401 + DMRTC2 ENSG00000142025.11 42348806 0.93 0.98 17590 54867
chr19 42363988 42376994 + RPS19 ENSG00000105372.2 42363988 0.8 1.0 17591 39685
chr19 42381190 42385439 + CD79A ENSG00000105369.5 42381190 0.96 0.92 17592 22483
chr19 42387228 42434302 + ARHGEF1 ENSG00000076928.13 42387228 0.84 1.0 17593 16445
Expression level of Genes
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miRNAs possibly regulated by vista29442[chr19:42303520-42303673]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 42373745 42373766 + hsa-miR-6797-3p MIMAT0027495 42364324 0.14971601666035592 0.916667 0.0 848
Expression level of miRNAs
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