EnhancerDB
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  3. vista29443[chr19:42304952-42305218]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29443[chr19:42304952-42305218]
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Tissue distribution of vista29443
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Transcription factor that possibly regulate vista29443[chr19:42304952-42305218]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42304954 42304958 H4TF2 TRANSFAC yes 70849436
chr19 42304954 42304958 H4TF2 TRANSFAC yes 113391171
chr19 42304954 42304968 EBF1 JASPAR yes 70849437
chr19 42304954 42304968 EBF1 JASPAR yes 113391172
chr19 42304960 42304978 ESR1 JASPAR yes 70849438
chr19 42304960 42304978 ESR1 JASPAR yes 113391173
chr19 42304969 42304977 CREB1 JASPAR yes 70849439
chr19 42304969 42304977 CREB1 JASPAR yes 113391174
chr19 42304969 42304987 ESR1 JASPAR yes 70849440
chr19 42304969 42304987 ESR1 JASPAR yes 113391175
chr19 42304970 42304978 NR4A2 JASPAR yes 70849441
chr19 42304970 42304978 NR4A2 JASPAR yes 113391176
chr19 42304971 42304986 ESR2 JASPAR yes 70849442
chr19 42304971 42304986 ESR2 JASPAR yes 113391177
chr19 42304972 42304976 ESR1 TRANSFAC yes 70849443
chr19 42304972 42304976 ESR1 TRANSFAC yes 113391178
chr19 42304983 42304989 MZF1 JASPAR yes 70849444
chr19 42304983 42304989 MZF1 JASPAR yes 113391179
chr19 42304994 42305009 JUND JASPAR yes 70849445
chr19 42304994 42305009 JUND JASPAR yes 113391180
chr19 42304995 42305008 JUN JASPAR yes 70849446
chr19 42304995 42305008 JUN JASPAR yes 113391181
chr19 42304996 42305009 ATF4 JASPAR yes 70849447
chr19 42304996 42305009 ATF4 JASPAR yes 113391182
chr19 42304996 42305010 ATF7 JASPAR yes 70849448
chr19 42304996 42305010 ATF7 JASPAR yes 113391183
chr19 42304997 42305009 DBP JASPAR yes 70849449
chr19 42304997 42305009 HLF JASPAR yes 70849450
chr19 42304997 42305009 JDP2 JASPAR yes 70849451
chr19 42304997 42305009 TEF JASPAR yes 70849452
chr19 42304997 42305009 DBP JASPAR yes 113391184
chr19 42304997 42305009 HLF JASPAR yes 113391185
chr19 42304997 42305009 JDP2 JASPAR yes 113391186
chr19 42304997 42305009 TEF JASPAR yes 113391187
chr19 42304998 42305009 CEBPB JASPAR yes 70849453
chr19 42304998 42305009 CEBPB JASPAR yes 113391188
chr19 42304998 42305011 DUXA JASPAR yes 70849454
chr19 42304998 42305011 DUXA JASPAR yes 113391189
chr19 42304999 42305010 NFIL3 JASPAR yes 70849455
chr19 42304999 42305010 NFIL3 JASPAR yes 113391190
chr19 42305014 42305018 NFE TRANSFAC yes 70849456
chr19 42305014 42305018 NFE TRANSFAC yes 113391191
chr19 42305014 42305019 GATA1 TRANSFAC yes 70849457
chr19 42305014 42305019 GATA1 TRANSFAC yes 113391192
chr19 42305014 42305020 GATA3 JASPAR yes 70849458
chr19 42305014 42305020 GATA3 JASPAR yes 113391193
chr19 42305025 42305046 ZNF263 JASPAR yes 70849459
chr19 42305025 42305046 ZNF263 JASPAR yes 113391194
chr19 42305031 42305045 GATA2 JASPAR yes 70849460
chr19 42305031 42305045 GATA2 JASPAR yes 113391195
chr19 42305031 42305052 ZNF263 JASPAR yes 70849461
chr19 42305031 42305052 ZNF263 JASPAR yes 113391196
chr19 42305035 42305043 GATA3 JASPAR yes 70849462
chr19 42305035 42305043 GATA5 JASPAR yes 70849463
chr19 42305035 42305043 GATA3 JASPAR yes 113391197
chr19 42305035 42305043 GATA5 JASPAR yes 113391198
chr19 42305037 42305058 ZNF263 JASPAR yes 70849464
chr19 42305037 42305058 ZNF263 JASPAR yes 113391199
chr19 42305040 42305061 ZNF263 JASPAR yes 70849465
chr19 42305040 42305061 ZNF263 JASPAR yes 113391200
chr19 42305042 42305056 SPIC JASPAR yes 70849466
chr19 42305042 42305056 SPIC JASPAR yes 113391201
chr19 42305046 42305061 NR2C2 JASPAR yes 70849467
chr19 42305046 42305061 NR2C2 JASPAR yes 113391202
chr19 42305051 42305061 TBR1 JASPAR yes 70849468
chr19 42305051 42305061 TBR1 JASPAR yes 113391203
chr19 42305051 42305062 TBX2 JASPAR yes 70849469
chr19 42305051 42305062 TBX2 JASPAR yes 113391204
chr19 42305053 42305061 MGA JASPAR yes 70849470
chr19 42305053 42305061 MGA JASPAR yes 113391205
chr19 42305057 42305075 ESR1 JASPAR yes 70849471
chr19 42305057 42305075 ESR1 JASPAR yes 113391206
chr19 42305083 42305094 FLI1 JASPAR yes 70849472
chr19 42305083 42305094 FLI1 JASPAR yes 113391207
chr19 42305104 42305118 EBF1 JASPAR yes 70849473
chr19 42305104 42305118 EBF1 JASPAR yes 113391208
chr19 42305105 42305120 RFX5 JASPAR yes 70849474
chr19 42305105 42305120 RFX5 JASPAR yes 113391209
chr19 42305106 42305112 MZF1 JASPAR yes 70849475
chr19 42305106 42305112 MZF1 JASPAR yes 113391210
chr19 42305123 42305126 MYB TRANSFAC yes 70849476
chr19 42305123 42305126 MYB TRANSFAC yes 113391211
chr19 42305128 42305143 AR JASPAR yes 70849477
chr19 42305128 42305143 AR JASPAR yes 113391212
chr19 42305145 42305155 SP1 JASPAR yes 70849478
chr19 42305145 42305155 SP1 JASPAR yes 113391213
chr19 42305162 42305180 ESR1 JASPAR yes 70849479
chr19 42305162 42305180 ESR1 JASPAR yes 113391214
chr19 42305171 42305186 TFAP2C JASPAR yes 70849480
chr19 42305171 42305186 TFAP2C JASPAR yes 113391215
chr19 42305181 42305185 LFA1 TRANSFAC yes 70849481
chr19 42305181 42305185 LFA1 TRANSFAC yes 113391216
chr19 42305181 42305192 CDX2 JASPAR yes 70849482
chr19 42305181 42305192 CDX2 JASPAR yes 113391217
chr19 42305182 42305193 HOXA10 JASPAR yes 70849483
chr19 42305182 42305193 HOXA10 JASPAR yes 113391218
chr19 42305183 42305192 CDX1 JASPAR yes 70849484
chr19 42305183 42305192 CDX1 JASPAR yes 113391219
chr19 42305183 42305193 HOXA13 JASPAR yes 70849485
chr19 42305183 42305193 HOXB13 JASPAR yes 70849486
chr19 42305183 42305193 HOXD13 JASPAR yes 70849487
chr19 42305183 42305193 HOXA13 JASPAR yes 113391220
chr19 42305183 42305193 HOXB13 JASPAR yes 113391221
chr19 42305183 42305193 HOXD13 JASPAR yes 113391222
chr19 42305187 42305193 TBP TRANSFAC yes 70849488
chr19 42305187 42305193 TBP TRANSFAC yes 113391223
chr19 42305204 42305214 TFAP4 JASPAR yes 70849489
chr19 42305204 42305214 TFAP4 JASPAR yes 113391224
SNP sites on vista29443[chr19:42304952-42305218]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29443[chr19:42304952-42305218]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42177235 42210895 - CEACAM7 ENSG00000007306.10 42210895 0.99 1.0 17584 5943
chr19 42212504 42233718 + CEACAM5 ENSG00000105388.10 42212504 0.97 0.96 17585 7552
chr19 42212531 42265190 + CEA ENSG00000267881.1 42212531 0.0 0.96 17586 7579
chr19 42254885 42276113 + CEACAM6 ENSG00000086548.8 42254885 0.98 0.99 17587 49933
chr19 42300369 42315591 + CEACAM3 ENSG00000170956.12 42300369 0.96 0.99 17588 95417
chr19 42341148 42348760 - LYPD4 ENSG00000183103.6 42348760 0.9 1.0 17589 56458
chr19 42348806 42356401 + DMRTC2 ENSG00000142025.11 42348806 0.93 0.98 17590 56412
chr19 42363988 42376994 + RPS19 ENSG00000105372.2 42363988 0.8 1.0 17591 41230
chr19 42381190 42385439 + CD79A ENSG00000105369.5 42381190 0.96 0.92 17592 24028
chr19 42387228 42434302 + ARHGEF1 ENSG00000076928.13 42387228 0.84 1.0 17593 17990
Expression level of Genes
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miRNAs possibly regulated by vista29443[chr19:42304952-42305218]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 42373745 42373766 + hsa-miR-6797-3p MIMAT0027495 42364324 0.15405895073152676 0.916667 0.0 848
Expression level of miRNAs
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