EnhancerDB
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  3. vista29445[chr19:42306827-42306954]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29445[chr19:42306827-42306954]
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Tissue distribution of vista29445
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Transcription factor that possibly regulate vista29445[chr19:42306827-42306954]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42306828 42306840 HNF1B JASPAR yes 70849574
chr19 42306828 42306840 HNF1B JASPAR yes 113391457
chr19 42306858 42306875 PAX1 JASPAR yes 70849575
chr19 42306858 42306875 PAX1 JASPAR yes 113391458
chr19 42306882 42306893 E2F6 JASPAR yes 70849576
chr19 42306882 42306893 E2F6 JASPAR yes 113391459
chr19 42306883 42306904 ZNF263 JASPAR yes 70849577
chr19 42306883 42306904 ZNF263 JASPAR yes 113391460
chr19 42306886 42306896 ZNF740 JASPAR yes 70849578
chr19 42306886 42306896 ZNF740 JASPAR yes 113391461
chr19 42306889 42306895 MZF1 JASPAR yes 70849579
chr19 42306889 42306895 MZF1 JASPAR yes 113391462
chr19 42306897 42306912 RUNX2 JASPAR yes 70849580
chr19 42306897 42306912 RUNX2 JASPAR yes 113391463
chr19 42306915 42306925 FIGLA JASPAR yes 70849581
chr19 42306915 42306925 ID4 JASPAR yes 70849582
chr19 42306915 42306925 MSC JASPAR yes 70849583
chr19 42306915 42306925 MYF6 JASPAR yes 70849584
chr19 42306915 42306925 TCF3 JASPAR yes 70849585
chr19 42306915 42306925 TCF4 JASPAR yes 70849586
chr19 42306915 42306925 FIGLA JASPAR yes 113391464
chr19 42306915 42306925 ID4 JASPAR yes 113391465
chr19 42306915 42306925 MSC JASPAR yes 113391466
chr19 42306915 42306925 MYF6 JASPAR yes 113391467
chr19 42306915 42306925 TCF3 JASPAR yes 113391468
chr19 42306915 42306925 TCF4 JASPAR yes 113391469
chr19 42306916 42306925 SNAI2 JASPAR yes 70849587
chr19 42306916 42306925 SNAI2 JASPAR yes 113391470
chr19 42306917 42306922 USF2 TRANSFAC yes 70849588
chr19 42306917 42306922 USF2 TRANSFAC yes 113391471
chr19 42306933 42306938 ETS2 TRANSFAC yes 70849589
chr19 42306933 42306938 ETS2 TRANSFAC yes 113391472
SNP sites on vista29445[chr19:42306827-42306954]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29445[chr19:42306827-42306954]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42177235 42210895 - CEACAM7 ENSG00000007306.10 42210895 0.99 1.0 17584 4068
chr19 42212504 42233718 + CEACAM5 ENSG00000105388.10 42212504 0.97 0.96 17585 5677
chr19 42212531 42265190 + CEA ENSG00000267881.1 42212531 0.0 0.96 17586 5704
chr19 42254885 42276113 + CEACAM6 ENSG00000086548.8 42254885 0.98 0.99 17587 48058
chr19 42300369 42315591 + CEACAM3 ENSG00000170956.12 42300369 0.96 0.99 17588 93542
chr19 42341148 42348760 - LYPD4 ENSG00000183103.6 42348760 0.9 1.0 17589 58194
chr19 42348806 42356401 + DMRTC2 ENSG00000142025.11 42348806 0.93 0.98 17590 58148
chr19 42363988 42376994 + RPS19 ENSG00000105372.2 42363988 0.8 1.0 17591 42966
chr19 42381190 42385439 + CD79A ENSG00000105369.5 42381190 0.96 0.92 17592 25764
chr19 42387228 42434302 + ARHGEF1 ENSG00000076928.13 42387228 0.84 1.0 17593 19726
Expression level of Genes
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miRNAs possibly regulated by vista29445[chr19:42306827-42306954]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 42373745 42373766 + hsa-miR-6797-3p MIMAT0027495 42364324 0.1596737067398942 0.916667 0.0 848
Expression level of miRNAs
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