EnhancerDB
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  3. vista29446[chr19:42308353-42308719]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29446[chr19:42308353-42308719]
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Tissue distribution of vista29446
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Transcription factor that possibly regulate vista29446[chr19:42308353-42308719]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42308344 42308356 POU3F1 JASPAR yes 70849590
chr19 42308344 42308356 POU3F2 JASPAR yes 70849591
chr19 42308344 42308356 POU3F1 JASPAR yes 113391654
chr19 42308344 42308356 POU3F2 JASPAR yes 113391655
chr19 42308359 42308373 PLAG1 JASPAR yes 70849592
chr19 42308359 42308373 PLAG1 JASPAR yes 113391657
chr19 42308369 42308374 SP1 TRANSFAC yes 70849593
chr19 42308369 42308374 SP1 TRANSFAC yes 113391658
chr19 42308371 42308376 TFAP2A TRANSFAC yes 70849594
chr19 42308371 42308376 TFAP2A TRANSFAC yes 113391659
chr19 42308371 42308377 MZF1 JASPAR yes 70849595
chr19 42308371 42308377 MZF1 JASPAR yes 113391660
chr19 42308413 42308417 H1TF2 TRANSFAC yes 70849596
chr19 42308413 42308417 NFE TRANSFAC yes 70849597
chr19 42308413 42308417 SRF TRANSFAC yes 70849598
chr19 42308413 42308417 H1TF2 TRANSFAC yes 113391661
chr19 42308413 42308417 NFE TRANSFAC yes 113391662
chr19 42308413 42308417 SRF TRANSFAC yes 113391663
chr19 42308423 42308436 DUXA JASPAR yes 70849599
chr19 42308423 42308436 DUXA JASPAR yes 113391664
chr19 42308424 42308435 DUX4 JASPAR yes 70849600
chr19 42308424 42308435 PHOX2A JASPAR yes 70849601
chr19 42308424 42308435 PROP1 JASPAR yes 70849602
chr19 42308424 42308435 DUX4 JASPAR yes 113391665
chr19 42308424 42308435 PHOX2A JASPAR yes 113391666
chr19 42308424 42308435 PROP1 JASPAR yes 113391667
chr19 42308429 42308440 PHOX2A JASPAR yes 70849603
chr19 42308429 42308440 PROP1 JASPAR yes 70849604
chr19 42308429 42308440 PHOX2A JASPAR yes 113391668
chr19 42308429 42308440 PROP1 JASPAR yes 113391669
chr19 42308453 42308474 ZNF263 JASPAR yes 70849605
chr19 42308453 42308474 ZNF263 JASPAR yes 113391670
chr19 42308465 42308479 SPI1 JASPAR yes 70849606
chr19 42308465 42308479 SPI1 JASPAR yes 113391671
chr19 42308469 42308475 PEA3 TRANSFAC yes 70849607
chr19 42308469 42308475 PEA3 TRANSFAC yes 113391672
chr19 42308470 42308478 EHF JASPAR yes 70849608
chr19 42308470 42308478 EHF JASPAR yes 113391673
chr19 42308481 42308494 POU2F2 JASPAR yes 70849609
chr19 42308481 42308494 POU2F2 JASPAR yes 113391674
chr19 42308501 42308509 EHF JASPAR yes 70849610
chr19 42308501 42308509 EHF JASPAR yes 113391675
chr19 42308507 42308511 YY1 TRANSFAC yes 70849611
chr19 42308507 42308511 YY1 TRANSFAC yes 113391676
chr19 42308516 42308519 MYB TRANSFAC yes 70849612
chr19 42308516 42308519 MYB TRANSFAC yes 113391677
chr19 42308524 42308535 ETV2 JASPAR yes 70849613
chr19 42308524 42308535 ETV2 JASPAR yes 113391678
chr19 42308525 42308535 ERF JASPAR yes 70849614
chr19 42308525 42308535 ERG JASPAR yes 70849615
chr19 42308525 42308535 ETS1 JASPAR yes 70849616
chr19 42308525 42308535 FEV JASPAR yes 70849617
chr19 42308525 42308535 FLI1 JASPAR yes 70849618
chr19 42308525 42308535 ERF JASPAR yes 113391679
chr19 42308525 42308535 ERG JASPAR yes 113391680
chr19 42308525 42308535 ETS1 JASPAR yes 113391681
chr19 42308525 42308535 FEV JASPAR yes 113391682
chr19 42308525 42308535 FLI1 JASPAR yes 113391683
chr19 42308525 42308536 ELK4 JASPAR yes 70849619
chr19 42308525 42308536 FLI1 JASPAR yes 70849620
chr19 42308525 42308536 ELK4 JASPAR yes 113391684
chr19 42308525 42308536 FLI1 JASPAR yes 113391685
chr19 42308526 42308534 FEV JASPAR yes 70849621
chr19 42308526 42308534 FEV JASPAR yes 113391686
chr19 42308554 42308558 YY1 TRANSFAC yes 70849622
chr19 42308554 42308558 YY1 TRANSFAC yes 113391687
chr19 42308577 42308595 SRF JASPAR yes 70849623
chr19 42308577 42308595 SRF JASPAR yes 113391688
chr19 42308579 42308595 SRF JASPAR yes 70849624
chr19 42308579 42308595 SRF JASPAR yes 113391689
chr19 42308579 42308597 SRF JASPAR yes 70849625
chr19 42308579 42308597 SRF JASPAR yes 113391690
chr19 42308582 42308594 SRF JASPAR yes 70849626
chr19 42308582 42308594 SRF JASPAR yes 113391691
chr19 42308592 42308596 YY1 TRANSFAC yes 70849627
chr19 42308592 42308596 YY1 TRANSFAC yes 113391692
chr19 42308605 42308616 FOXH1 JASPAR yes 70849628
chr19 42308605 42308616 FOXH1 JASPAR yes 113391693
chr19 42308626 42308641 PRDM1 JASPAR yes 70849629
chr19 42308626 42308641 PRDM1 JASPAR yes 113391694
chr19 42308647 42308651 NFE TRANSFAC yes 70849630
chr19 42308647 42308651 NFE TRANSFAC yes 113391695
chr19 42308656 42308659 MYB TRANSFAC yes 70849631
chr19 42308656 42308659 MYB TRANSFAC yes 113391696
chr19 42308696 42308701 H4TF1 TRANSFAC yes 70849632
chr19 42308696 42308701 H4TF1 TRANSFAC yes 113391697
chr19 42308701 42308716 RUNX2 JASPAR yes 70849633
chr19 42308701 42308716 RUNX2 JASPAR yes 113391698
chr19 42308705 42308723 MAFF JASPAR yes 70849634
chr19 42308705 42308723 MAFF JASPAR yes 113391699
chr19 42308706 42308721 MAFK JASPAR yes 70849635
chr19 42308706 42308721 MAFK JASPAR yes 113391700
chr19 42308710 42308721 NRL JASPAR yes 70849636
chr19 42308710 42308721 NRL JASPAR yes 113391701
SNP sites on vista29446[chr19:42308353-42308719]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29446[chr19:42308353-42308719]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42177235 42210895 - CEACAM7 ENSG00000007306.10 42210895 0.99 1.0 17584 2542
chr19 42212504 42233718 + CEACAM5 ENSG00000105388.10 42212504 0.97 0.96 17585 4151
chr19 42212531 42265190 + CEA ENSG00000267881.1 42212531 0.0 0.96 17586 4178
chr19 42254885 42276113 + CEACAM6 ENSG00000086548.8 42254885 0.98 0.99 17587 46532
chr19 42300369 42315591 + CEACAM3 ENSG00000170956.12 42300369 0.96 0.99 17588 92016
chr19 42341148 42348760 - LYPD4 ENSG00000183103.6 42348760 0.9 1.0 17589 59959
chr19 42348806 42356401 + DMRTC2 ENSG00000142025.11 42348806 0.93 0.98 17590 59913
chr19 42363988 42376994 + RPS19 ENSG00000105372.2 42363988 0.8 1.0 17591 44731
chr19 42381190 42385439 + CD79A ENSG00000105369.5 42381190 0.96 0.92 17592 27529
chr19 42387228 42434302 + ARHGEF1 ENSG00000076928.13 42387228 0.84 1.0 17593 21491
Expression level of Genes
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miRNAs possibly regulated by vista29446[chr19:42308353-42308719]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 42373745 42373766 + hsa-miR-6797-3p MIMAT0027495 42364324 0.16516290726817043 0.916667 0.0 848
Expression level of miRNAs
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