EnhancerDB
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  3. vista29448[chr19:42381967-42382342]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29448[chr19:42381967-42382342]
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Tissue distribution of vista29448
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Transcription factor that possibly regulate vista29448[chr19:42381967-42382342]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42380898 42382576 POLR2A UCSC Txn Factor no Conserved 108411220
chr19 42381978 42381984 MZF1 JASPAR yes 70849663
chr19 42382007 42382012 NFY TRANSFAC yes 70849664
chr19 42382042 42382053 GCM1 JASPAR yes 70849665
chr19 42382056 42382077 ZNF263 JASPAR yes 70849666
chr19 42382057 42382067 SP1 JASPAR yes 70849667
chr19 42382058 42382079 ZNF263 JASPAR yes 70849668
chr19 42382059 42382080 ZNF263 JASPAR yes 70849669
chr19 42382062 42382083 ZNF263 JASPAR yes 70849670
chr19 42382063 42382069 MZF1 JASPAR yes 70849671
chr19 42382065 42382086 ZNF263 JASPAR yes 70849672
chr19 42382068 42382089 ZNF263 JASPAR yes 70849673
chr19 42382070 42382083 ELF1 JASPAR yes 70849674
chr19 42382070 42382084 SPI1 JASPAR yes 70849675
chr19 42382070 42382091 ZNF263 JASPAR yes 70849676
chr19 42382072 42382093 ZNF263 JASPAR yes 70849677
chr19 42382073 42382094 ZNF263 JASPAR yes 70849678
chr19 42382076 42382097 ZNF263 JASPAR yes 70849679
chr19 42382078 42382099 ZNF263 JASPAR yes 70849680
chr19 42382081 42382102 ZNF263 JASPAR yes 70849681
chr19 42382082 42382103 ZNF263 JASPAR yes 70849682
chr19 42382085 42382106 ZNF263 JASPAR yes 70849683
chr19 42382088 42382109 ZNF263 JASPAR yes 70849684
chr19 42382093 42382104 E2F6 JASPAR yes 70849685
chr19 42382094 42382115 ZNF263 JASPAR yes 70849686
chr19 42382095 42382116 ZNF263 JASPAR yes 70849687
chr19 42382111 42382130 CTCF JASPAR yes 70849688
chr19 42382131 42382145 GLIS2 JASPAR yes 70849689
chr19 42382131 42382145 GLIS3 JASPAR yes 70849690
chr19 42382156 42382167 NFKB1 JASPAR yes 70849691
chr19 42382157 42382167 NFKB1 JASPAR yes 70849692
chr19 42382157 42382167 RELA JASPAR yes 70849693
chr19 42382157 42382168 NFKB1 JASPAR yes 70849694
chr19 42382178 42382183 NFY TRANSFAC yes 70849695
chr19 42382241 42382255 PLAG1 JASPAR yes 70849696
chr19 42382289 42382303 RXRB JASPAR yes 70849697
chr19 42382289 42382303 RXRG JASPAR yes 70849698
chr19 42382289 42382304 NR2C2 JASPAR yes 70849699
chr19 42382292 42382305 NR2F1 JASPAR yes 70849700
SNP sites on vista29448[chr19:42381967-42382342]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29448[chr19:42381967-42382342]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42300369 42315591 + CEACAM3 ENSG00000170956.12 42300369 0.96 0.99 17588 18402
chr19 42341148 42348760 - LYPD4 ENSG00000183103.6 42348760 0.9 1.0 17589 66793
chr19 42348806 42356401 + DMRTC2 ENSG00000142025.11 42348806 0.93 0.98 17590 66839
chr19 42363988 42376994 + RPS19 ENSG00000105372.2 42363988 0.8 1.0 17591 82021
chr19 42381190 42385439 + CD79A ENSG00000105369.5 42381190 0.96 0.92 17592 99223
chr19 42387228 42434302 + ARHGEF1 ENSG00000076928.13 42387228 0.84 1.0 17593 95114
chr19 42460833 42463542 - RABAC1 ENSG00000105404.6 42463542 0.64 1.0 17594 18800
Expression level of Genes
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miRNAs possibly regulated by vista29448[chr19:42381967-42382342]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results