EnhancerDB
  1. Home
  2. Enhancers
  3. vista29449[chr19:42404902-42404963]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29449[chr19:42404902-42404963]
Back to top
Tissue distribution of vista29449
Back to top
Transcription factor that possibly regulate vista29449[chr19:42404902-42404963]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42404929 42404950 IRF1 JASPAR yes 70849701
chr19 42404930 42404951 IRF1 JASPAR yes 70849702
chr19 42404931 42404946 STAT2 JASPAR yes 70849703
chr19 42404932 42404953 IRF1 JASPAR yes 70849704
chr19 42404933 42404954 IRF1 JASPAR yes 70849705
chr19 42404934 42404949 FOXP1 JASPAR yes 70849706
chr19 42404934 42404955 IRF1 JASPAR yes 70849707
chr19 42404935 42404950 FOXP1 JASPAR yes 70849708
chr19 42404935 42404956 IRF1 JASPAR yes 70849709
chr19 42404936 42404951 FOXP1 JASPAR yes 70849710
chr19 42404936 42404957 IRF1 JASPAR yes 70849711
chr19 42404937 42404952 FOXP1 JASPAR yes 70849712
chr19 42404937 42404958 IRF1 JASPAR yes 70849713
chr19 42404938 42404953 FOXP1 JASPAR yes 70849714
chr19 42404938 42404959 IRF1 JASPAR yes 70849715
chr19 42404939 42404954 FOXP1 JASPAR yes 70849716
chr19 42404939 42404960 IRF1 JASPAR yes 70849717
chr19 42404940 42404955 FOXP1 JASPAR yes 70849718
chr19 42404940 42404961 IRF1 JASPAR yes 70849719
chr19 42404941 42404956 FOXP1 JASPAR yes 70849720
chr19 42404942 42404957 FOXP1 JASPAR yes 70849721
chr19 42404943 42404958 FOXP1 JASPAR yes 70849722
chr19 42404944 42404959 FOXP1 JASPAR yes 70849723
chr19 42404945 42404960 FOXP1 JASPAR yes 70849724
chr19 42404946 42404961 FOXP1 JASPAR yes 70849725
chr19 42404947 42404962 FOXP1 JASPAR yes 70849726
chr19 42404948 42404963 FOXP1 JASPAR yes 70849727
SNP sites on vista29449[chr19:42404902-42404963]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29449[chr19:42404902-42404963]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42341148 42348760 - LYPD4 ENSG00000183103.6 42348760 0.9 1.0 17589 43858
chr19 42348806 42356401 + DMRTC2 ENSG00000142025.11 42348806 0.93 0.98 17590 43904
chr19 42363988 42376994 + RPS19 ENSG00000105372.2 42363988 0.8 1.0 17591 59086
chr19 42381190 42385439 + CD79A ENSG00000105369.5 42381190 0.96 0.92 17592 76288
chr19 42387228 42434302 + ARHGEF1 ENSG00000076928.13 42387228 0.84 1.0 17593 82326
chr19 42460833 42463542 - RABAC1 ENSG00000105404.6 42463542 0.64 1.0 17594 41421
chr19 42470734 42501649 - ATP1A3 ENSG00000105409.11 42501649 0.99 1.0 17595 3314
Expression level of Genes
Back to top
miRNAs possibly regulated by vista29449[chr19:42404902-42404963]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results