EnhancerDB
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  3. vista29450[chr19:42419916-42420316]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29450[chr19:42419916-42420316]
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Tissue distribution of vista29450
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Transcription factor that possibly regulate vista29450[chr19:42419916-42420316]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42419916 42419930 PLAG1 JASPAR yes 70849728
chr19 42419918 42419929 E2F1 JASPAR yes 70849729
chr19 42419925 42419939 PLAG1 JASPAR yes 70849730
chr19 42419936 42419945 SOX9 JASPAR yes 70849731
chr19 42419958 42419969 E2F6 JASPAR yes 70849732
chr19 42419970 42419983 TFAP2B JASPAR yes 70849733
chr19 42419977 42419982 SP1 TRANSFAC yes 70849734
chr19 42419978 42419993 TFAP2A JASPAR yes 70849735
chr19 42419978 42419993 TFAP2C JASPAR yes 70849736
chr19 42419979 42419990 TFAP2A JASPAR yes 70849737
chr19 42419979 42419990 TFAP2B JASPAR yes 70849738
chr19 42419979 42419990 TFAP2C JASPAR yes 70849739
chr19 42419979 42419991 INSM1 JASPAR yes 70849740
chr19 42419980 42419989 TFAP2A JASPAR yes 70849741
chr19 42419991 42420009 SRF JASPAR yes 70849742
chr19 42420036 42420048 INSM1 JASPAR yes 70849743
chr19 42420040 42420048 SP1 TRANSFAC yes 70849744
chr19 42420047 42420062 RFX5 JASPAR yes 70849745
chr19 42420053 42420068 RFX5 JASPAR yes 70849746
chr19 42420056 42420062 ZNF354C JASPAR yes 70849747
chr19 42420058 42420068 MZF1 JASPAR yes 70849748
chr19 42420061 42420066 TFAP2A TRANSFAC yes 70849749
chr19 42420061 42420067 MZF1 JASPAR yes 70849750
chr19 42420067 42420082 RUNX2 JASPAR yes 70849751
chr19 42420068 42420084 ZNF143 JASPAR yes 70849752
chr19 42420071 42420091 RREB1 JASPAR yes 70849753
chr19 42420074 42420094 RREB1 JASPAR yes 70849754
chr19 42420075 42420096 ZNF263 JASPAR yes 70849755
chr19 42420077 42420098 ZNF263 JASPAR yes 70849756
chr19 42420078 42420098 RREB1 JASPAR yes 70849757
chr19 42420079 42420089 SP1 JASPAR yes 70849758
chr19 42420079 42420089 SP1 TRANSFAC yes 70849759
chr19 42420079 42420099 RREB1 JASPAR yes 70849760
chr19 42420080 42420090 SP1 JASPAR yes 70849761
chr19 42420081 42420101 RREB1 JASPAR yes 70849762
chr19 42420082 42420092 ZNF740 JASPAR yes 70849763
chr19 42420084 42420094 SP1 JASPAR yes 70849764
chr19 42420084 42420098 PLAG1 JASPAR yes 70849765
chr19 42420085 42420095 SP1 JASPAR yes 70849766
chr19 42420086 42420092 SP1 TRANSFAC yes 70849767
chr19 42420086 42420096 SP1 JASPAR yes 70849768
chr19 42420087 42420097 SP1 JASPAR yes 70849769
chr19 42420090 42420100 ZNF740 JASPAR yes 70849770
chr19 42420090 42420104 GLIS2 JASPAR yes 70849771
chr19 42420090 42420104 ZIC1 JASPAR yes 70849772
chr19 42420090 42420105 ZIC3 JASPAR yes 70849773
chr19 42420090 42420105 ZIC4 JASPAR yes 70849774
chr19 42420091 42420101 SP1 JASPAR yes 70849775
chr19 42420094 42420100 SP1 TRANSFAC yes 70849776
chr19 42420129 42420147 IRF2 JASPAR yes 70849777
chr19 42420135 42420150 HNF1A JASPAR yes 70849778
chr19 42420136 42420149 HNF1B JASPAR yes 70849779
chr19 42420136 42420150 POU4F1 JASPAR yes 70849780
chr19 42420136 42420152 POU4F2 JASPAR yes 70849781
chr19 42420136 42420152 POU4F3 JASPAR yes 70849782
chr19 42420136 42420157 IRF1 JASPAR yes 70849783
chr19 42420137 42420149 HNF1B JASPAR yes 70849784
chr19 42420142 42420157 MEF2C JASPAR yes 70849785
chr19 42420142 42420163 IRF1 JASPAR yes 70849786
chr19 42420143 42420155 MEF2A JASPAR yes 70849787
chr19 42420145 42420156 PROP1 JASPAR yes 70849788
chr19 42420148 42420169 ZNF263 JASPAR yes 70849789
chr19 42420151 42420155 YY1 TRANSFAC yes 70849790
chr19 42420151 42420172 ZNF263 JASPAR yes 70849791
chr19 42420155 42420166 FLI1 JASPAR yes 70849792
chr19 42420162 42420183 ZNF263 JASPAR yes 70849793
chr19 42420163 42420184 ZNF263 JASPAR yes 70849794
chr19 42420164 42420174 ZNF740 JASPAR yes 70849795
chr19 42420166 42420176 ZNF740 JASPAR yes 70849796
chr19 42420168 42420182 PLAG1 JASPAR yes 70849797
chr19 42420169 42420183 PLAG1 JASPAR yes 70849798
chr19 42420169 42420184 NR2C2 JASPAR yes 70849799
chr19 42420169 42420190 ZNF263 JASPAR yes 70849800
chr19 42420170 42420184 PLAG1 JASPAR yes 70849801
chr19 42420189 42420204 ZIC4 JASPAR yes 70849802
chr19 42420191 42420196 SP1 TRANSFAC yes 70849803
chr19 42420191 42420200 THAP1 JASPAR yes 70849804
chr19 42420192 42420204 INSM1 JASPAR yes 70849805
chr19 42420192 42420204 TFAP2A JASPAR yes 70849806
chr19 42420192 42420204 TFAP2B JASPAR yes 70849807
chr19 42420192 42420211 RFX2 JASPAR yes 70849808
chr19 42420196 42420212 RFX2 JASPAR yes 70849809
chr19 42420196 42420212 RFX3 JASPAR yes 70849810
chr19 42420196 42420212 RFX4 JASPAR yes 70849811
chr19 42420196 42420212 RFX5 JASPAR yes 70849812
chr19 42420254 42420258 LFA1 TRANSFAC yes 70849813
chr19 42420267 42420288 ZNF263 JASPAR yes 70849814
chr19 42420286 42420292 NFIC JASPAR yes 70849815
chr19 42420294 42420306 GLI2 JASPAR yes 70849816
chr19 42420294 42420309 RUNX2 JASPAR yes 70849817
chr19 42420295 42420305 RUNX3 JASPAR yes 70849818
chr19 42420295 42420315 RREB1 JASPAR yes 70849819
SNP sites on vista29450[chr19:42419916-42420316]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29450[chr19:42419916-42420316]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42341148 42348760 - LYPD4 ENSG00000183103.6 42348760 0.9 1.0 17589 28844
chr19 42348806 42356401 + DMRTC2 ENSG00000142025.11 42348806 0.93 0.98 17590 28890
chr19 42363988 42376994 + RPS19 ENSG00000105372.2 42363988 0.8 1.0 17591 44072
chr19 42381190 42385439 + CD79A ENSG00000105369.5 42381190 0.96 0.92 17592 61274
chr19 42387228 42434302 + ARHGEF1 ENSG00000076928.13 42387228 0.84 1.0 17593 67312
chr19 42460833 42463542 - RABAC1 ENSG00000105404.6 42463542 0.64 1.0 17594 56774
chr19 42470734 42501649 - ATP1A3 ENSG00000105409.11 42501649 0.99 1.0 17595 18667
Expression level of Genes
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miRNAs possibly regulated by vista29450[chr19:42419916-42420316]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results