EnhancerDB
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  3. vista29454[chr19:42440101-42440390]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29454[chr19:42440101-42440390]
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Tissue distribution of vista29454
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Transcription factor that possibly regulate vista29454[chr19:42440101-42440390]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42440101 42440113 IRF1 JASPAR yes 70849987
chr19 42440101 42440113 IRF1 JASPAR yes 113395531
chr19 42440101 42440115 IRF7 JASPAR yes 70849988
chr19 42440101 42440115 IRF8 JASPAR yes 70849989
chr19 42440101 42440115 IRF7 JASPAR yes 113395532
chr19 42440101 42440115 IRF8 JASPAR yes 113395533
chr19 42440101 42440116 IRF9 JASPAR yes 70849990
chr19 42440101 42440116 IRF9 JASPAR yes 113395534
chr19 42440114 42440128 IRF7 JASPAR yes 70849991
chr19 42440114 42440128 IRF7 JASPAR yes 113395535
chr19 42440116 42440128 IRF1 JASPAR yes 70849992
chr19 42440116 42440128 IRF1 JASPAR yes 113395536
chr19 42440119 42440124 MYB TRANSFAC yes 70849993
chr19 42440119 42440124 MYB TRANSFAC yes 113395537
chr19 42440126 42440130 YY1 TRANSFAC yes 70849994
chr19 42440126 42440130 YY1 TRANSFAC yes 113395538
chr19 42440150 42440155 SP1 TRANSFAC yes 70849995
chr19 42440150 42440155 SP1 TRANSFAC yes 113395539
chr19 42440162 42440174 HNF1B JASPAR yes 70849996
chr19 42440162 42440174 HNF1B JASPAR yes 113395540
chr19 42440166 42440182 POU4F2 JASPAR yes 70849997
chr19 42440166 42440182 POU4F3 JASPAR yes 70849998
chr19 42440166 42440182 POU4F2 JASPAR yes 113395541
chr19 42440166 42440182 POU4F3 JASPAR yes 113395542
chr19 42440168 42440182 POU4F1 JASPAR yes 70849999
chr19 42440168 42440182 POU4F1 JASPAR yes 113395543
chr19 42440169 42440175 TCF4 TRANSFAC yes 70850000
chr19 42440169 42440175 TCF4 TRANSFAC yes 113395544
chr19 42440202 42440207 SP1 TRANSFAC yes 70850001
chr19 42440202 42440207 SP1 TRANSFAC yes 113395545
chr19 42440207 42440220 TFAP2B JASPAR yes 70850002
chr19 42440207 42440220 TFAP2C JASPAR yes 70850003
chr19 42440207 42440220 TFAP2B JASPAR yes 113395546
chr19 42440207 42440220 TFAP2C JASPAR yes 113395547
chr19 42440218 42440227 THAP1 JASPAR yes 70850004
chr19 42440218 42440227 THAP1 JASPAR yes 113395548
chr19 42440220 42440227 SP1 TRANSFAC yes 70850005
chr19 42440220 42440227 SP1 TRANSFAC yes 113395549
chr19 42440221 42440228 SP1 TRANSFAC yes 70850006
chr19 42440221 42440228 SP1 TRANSFAC yes 113395550
chr19 42440222 42440227 SP1 TRANSFAC yes 70850007
chr19 42440222 42440227 SP1 TRANSFAC yes 113395551
chr19 42440222 42440228 SP1 TRANSFAC yes 70850008
chr19 42440222 42440228 SP1 TRANSFAC yes 113395552
chr19 42440233 42440238 ETS2 TRANSFAC yes 70850009
chr19 42440233 42440238 ETS2 TRANSFAC yes 113395553
chr19 42440234 42440249 TFAP2C JASPAR yes 70850010
chr19 42440234 42440249 TFAP2C JASPAR yes 113395554
chr19 42440237 42440248 TFAP2A JASPAR yes 70850011
chr19 42440237 42440248 TFAP2B JASPAR yes 70850012
chr19 42440237 42440248 TFAP2C JASPAR yes 70850013
chr19 42440237 42440248 TFAP2A JASPAR yes 113395555
chr19 42440237 42440248 TFAP2B JASPAR yes 113395556
chr19 42440237 42440248 TFAP2C JASPAR yes 113395557
chr19 42440239 42440259 RREB1 JASPAR yes 70850014
chr19 42440239 42440259 RREB1 JASPAR yes 113395558
chr19 42440241 42440261 RREB1 JASPAR yes 70850015
chr19 42440241 42440261 RREB1 JASPAR yes 113395559
chr19 42440243 42440263 RREB1 JASPAR yes 70850016
chr19 42440243 42440263 RREB1 JASPAR yes 113395560
chr19 42440244 42440264 RREB1 JASPAR yes 70850017
chr19 42440244 42440264 RREB1 JASPAR yes 113395561
chr19 42440245 42440250 SP1 TRANSFAC yes 70850018
chr19 42440245 42440250 SP1 TRANSFAC yes 113395562
chr19 42440245 42440265 RREB1 JASPAR yes 70850019
chr19 42440245 42440265 RREB1 JASPAR yes 113395563
chr19 42440246 42440256 ZNF740 JASPAR yes 70850020
chr19 42440246 42440256 ZNF740 JASPAR yes 113395564
chr19 42440248 42440258 SP1 JASPAR yes 70850021
chr19 42440248 42440258 SP1 JASPAR yes 113395565
chr19 42440251 42440256 SP1 TRANSFAC yes 70850022
chr19 42440251 42440256 SP1 TRANSFAC yes 113395566
chr19 42440252 42440262 ZNF740 JASPAR yes 70850023
chr19 42440252 42440262 ZNF740 JASPAR yes 113395567
chr19 42440254 42440264 SP1 JASPAR yes 70850024
chr19 42440254 42440264 SP1 JASPAR yes 113395568
chr19 42440257 42440262 SP1 TRANSFAC yes 70850025
chr19 42440257 42440262 SP1 TRANSFAC yes 113395569
chr19 42440261 42440265 LFA1 TRANSFAC yes 70850026
chr19 42440261 42440265 LFA1 TRANSFAC yes 113395570
chr19 42440278 42440289 EBF1 JASPAR yes 70850027
chr19 42440278 42440289 EBF1 JASPAR yes 113395571
chr19 42440282 42440287 TFAP2A TRANSFAC yes 70850028
chr19 42440282 42440287 TFAP2A TRANSFAC yes 113395572
chr19 42440282 42440288 MZF1 JASPAR yes 70850029
chr19 42440282 42440288 MZF1 JASPAR yes 113395573
chr19 42440282 42440293 NFKB1 JASPAR yes 70850030
chr19 42440282 42440293 NFKB1 JASPAR yes 113395574
chr19 42440283 42440293 NFKB1 JASPAR yes 70850031
chr19 42440283 42440293 NFKB1 JASPAR yes 113395575
chr19 42440283 42440294 NFKB1 JASPAR yes 70850032
chr19 42440283 42440294 NFKB1 JASPAR yes 113395576
chr19 42440306 42440311 TFAP2A TRANSFAC yes 70850033
chr19 42440306 42440311 TFAP2A TRANSFAC yes 113395577
chr19 42440306 42440312 MZF1 JASPAR yes 70850034
chr19 42440306 42440312 MZF1 JASPAR yes 113395578
chr19 42440308 42440313 ETS2 TRANSFAC yes 70850035
chr19 42440308 42440313 ETS2 TRANSFAC yes 113395579
chr19 42440323 42440327 NFE TRANSFAC yes 70850036
chr19 42440323 42440327 NFE TRANSFAC yes 113395580
chr19 42440336 42440349 SCRT2 JASPAR yes 70850037
chr19 42440336 42440349 SCRT2 JASPAR yes 113395581
chr19 42440336 42440351 SCRT1 JASPAR yes 70850038
chr19 42440336 42440351 SCRT1 JASPAR yes 113395582
chr19 42440340 42440349 SNAI2 JASPAR yes 70850039
chr19 42440340 42440349 SNAI2 JASPAR yes 113395583
chr19 42440340 42440350 FIGLA JASPAR yes 70850040
chr19 42440340 42440350 TCF3 JASPAR yes 70850041
chr19 42440340 42440350 FIGLA JASPAR yes 113395584
chr19 42440340 42440350 TCF3 JASPAR yes 113395585
chr19 42440381 42440401 ESR1 JASPAR yes 70850042
chr19 42440381 42440401 ESR1 JASPAR yes 113395586
chr19 42440384 42440402 RARA JASPAR yes 70850043
chr19 42440384 42440402 RARA JASPAR yes 113395587
chr19 42440385 42440403 ESR2 JASPAR yes 70850044
chr19 42440385 42440403 ESR2 JASPAR yes 113395588
chr19 42440386 42440401 ESR2 JASPAR yes 70850045
chr19 42440386 42440401 ESR2 JASPAR yes 113395589
chr19 42440386 42440406 ESR1 JASPAR yes 70850046
chr19 42440386 42440406 ESR1 JASPAR yes 113395590
SNP sites on vista29454[chr19:42440101-42440390]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29454[chr19:42440101-42440390]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42341148 42348760 - LYPD4 ENSG00000183103.6 42348760 0.9 1.0 17589 8659
chr19 42348806 42356401 + DMRTC2 ENSG00000142025.11 42348806 0.93 0.98 17590 8705
chr19 42363988 42376994 + RPS19 ENSG00000105372.2 42363988 0.8 1.0 17591 23887
chr19 42381190 42385439 + CD79A ENSG00000105369.5 42381190 0.96 0.92 17592 41089
chr19 42387228 42434302 + ARHGEF1 ENSG00000076928.13 42387228 0.84 1.0 17593 47127
chr19 42460833 42463542 - RABAC1 ENSG00000105404.6 42463542 0.64 1.0 17594 76848
chr19 42470734 42501649 - ATP1A3 ENSG00000105409.11 42501649 0.99 1.0 17595 38741
Expression level of Genes
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miRNAs possibly regulated by vista29454[chr19:42440101-42440390]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results