EnhancerDB
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  3. vista29455[chr19:42440713-42441005]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29455[chr19:42440713-42441005]
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Tissue distribution of vista29455
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Transcription factor that possibly regulate vista29455[chr19:42440713-42441005]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42440721 42440726 GATA1 TRANSFAC yes 70850047
chr19 42440721 42440726 GATA1 TRANSFAC yes 113395621
chr19 42440728 42440732 NFE TRANSFAC yes 70850048
chr19 42440728 42440732 NFE TRANSFAC yes 113395622
chr19 42440753 42440756 MYB TRANSFAC yes 70850049
chr19 42440753 42440756 MYB TRANSFAC yes 113395623
chr19 42440785 42440805 ESR1 JASPAR yes 70850050
chr19 42440785 42440805 ESR1 JASPAR yes 113395624
chr19 42440788 42440805 RXRA JASPAR yes 70850051
chr19 42440788 42440805 RXRA JASPAR yes 113395625
chr19 42440788 42440806 ESR1 JASPAR yes 70850052
chr19 42440788 42440806 ESR2 JASPAR yes 70850053
chr19 42440788 42440806 ESR1 JASPAR yes 113395626
chr19 42440788 42440806 ESR2 JASPAR yes 113395627
chr19 42440789 42440806 ESR1 JASPAR yes 70850054
chr19 42440789 42440806 ESR1 JASPAR yes 113395628
chr19 42440789 42440807 ESR1 JASPAR yes 70850055
chr19 42440789 42440807 ESR2 JASPAR yes 70850056
chr19 42440789 42440807 ESR1 JASPAR yes 113395629
chr19 42440789 42440807 ESR2 JASPAR yes 113395630
chr19 42440790 42440805 ESR2 JASPAR yes 70850057
chr19 42440790 42440805 ESR2 JASPAR yes 113395631
chr19 42440790 42440810 ESR1 JASPAR yes 70850058
chr19 42440790 42440810 ESR1 JASPAR yes 113395632
chr19 42440797 42440808 ESRRA JASPAR yes 70850059
chr19 42440797 42440808 ESRRA JASPAR yes 113395633
chr19 42440817 42440820 MYB TRANSFAC yes 70850060
chr19 42440817 42440820 MYB TRANSFAC yes 113395634
chr19 42440823 42440839 ZNF143 JASPAR yes 70850061
chr19 42440823 42440839 ZNF143 JASPAR yes 113395635
chr19 42440825 42440840 RUNX2 JASPAR yes 70850062
chr19 42440825 42440840 RUNX2 JASPAR yes 113395636
chr19 42440838 42440851 SMAD2 JASPAR yes 70850063
chr19 42440838 42440851 SMAD2 JASPAR yes 113395637
chr19 42440842 42440846 NFE TRANSFAC yes 70850064
chr19 42440842 42440846 NFE TRANSFAC yes 113395638
chr19 42440850 42440854 NFE TRANSFAC yes 70850065
chr19 42440850 42440854 NFE TRANSFAC yes 113395639
chr19 42440850 42440863 SMAD2 JASPAR yes 70850066
chr19 42440850 42440863 SMAD2 JASPAR yes 113395640
chr19 42440851 42440866 HSF1 JASPAR yes 70850067
chr19 42440851 42440866 HSF1 JASPAR yes 113395641
chr19 42440852 42440865 HSF4 JASPAR yes 70850068
chr19 42440852 42440865 HSF4 JASPAR yes 113395642
chr19 42440878 42440887 THAP1 JASPAR yes 70850069
chr19 42440878 42440887 THAP1 JASPAR yes 113395643
chr19 42440881 42440885 LFA1 TRANSFAC yes 70850070
chr19 42440881 42440885 LFA1 TRANSFAC yes 113395644
chr19 42440885 42440905 RREB1 JASPAR yes 70850071
chr19 42440885 42440905 RREB1 JASPAR yes 113395645
chr19 42440887 42440891 YY1 TRANSFAC yes 70850072
chr19 42440887 42440891 YY1 TRANSFAC yes 113395646
chr19 42440887 42440907 RREB1 JASPAR yes 70850073
chr19 42440887 42440907 RREB1 JASPAR yes 113395647
chr19 42440889 42440904 RUNX2 JASPAR yes 70850074
chr19 42440889 42440904 RUNX2 JASPAR yes 113395648
chr19 42440907 42440925 ESR2 JASPAR yes 70850075
chr19 42440907 42440925 ESR2 JASPAR yes 113395649
chr19 42440909 42440924 ESR2 JASPAR yes 70850076
chr19 42440909 42440924 ESR2 JASPAR yes 113395650
chr19 42440914 42440926 IRF1 JASPAR yes 70850077
chr19 42440914 42440926 IRF1 JASPAR yes 113395651
chr19 42440915 42440935 RREB1 JASPAR yes 70850078
chr19 42440915 42440935 RREB1 JASPAR yes 113395652
chr19 42440924 42440939 RUNX2 JASPAR yes 70850079
chr19 42440924 42440939 RUNX2 JASPAR yes 113395653
chr19 42440963 42440969 ZNF354C JASPAR yes 70850080
chr19 42440963 42440969 ZNF354C JASPAR yes 113395654
chr19 42440984 42440988 NFE TRANSFAC yes 70850081
chr19 42440984 42440988 NFE TRANSFAC yes 113395655
chr19 42440984 42440997 SMAD2 JASPAR yes 70850082
chr19 42440984 42440997 SMAD2 JASPAR yes 113395656
chr19 42440988 42440992 NFE TRANSFAC yes 70850083
chr19 42440988 42440992 NFE TRANSFAC yes 113395657
chr19 42440992 42440996 NFE TRANSFAC yes 70850084
chr19 42440992 42440996 NFE TRANSFAC yes 113395658
SNP sites on vista29455[chr19:42440713-42441005]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29455[chr19:42440713-42441005]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42341148 42348760 - LYPD4 ENSG00000183103.6 42348760 0.9 1.0 17589 8047
chr19 42348806 42356401 + DMRTC2 ENSG00000142025.11 42348806 0.93 0.98 17590 8093
chr19 42363988 42376994 + RPS19 ENSG00000105372.2 42363988 0.8 1.0 17591 23275
chr19 42381190 42385439 + CD79A ENSG00000105369.5 42381190 0.96 0.92 17592 40477
chr19 42387228 42434302 + ARHGEF1 ENSG00000076928.13 42387228 0.84 1.0 17593 46515
chr19 42460833 42463542 - RABAC1 ENSG00000105404.6 42463542 0.64 1.0 17594 77463
chr19 42470734 42501649 - ATP1A3 ENSG00000105409.11 42501649 0.99 1.0 17595 39356
Expression level of Genes
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miRNAs possibly regulated by vista29455[chr19:42440713-42441005]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results