EnhancerDB
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  3. vista29457[chr19:42444727-42445027]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29457[chr19:42444727-42445027]
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Tissue distribution of vista29457
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Transcription factor that possibly regulate vista29457[chr19:42444727-42445027]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42443982 42445423 POLR2A UCSC Txn Factor no Conserved 108411674
chr19 42443982 42445423 POLR2A UCSC Txn Factor no Conserved 108411675
chr19 42444740 42444751 FOSL2 JASPAR yes 70850197
chr19 42444740 42444751 FOSL2 JASPAR yes 113396206
chr19 42444760 42444765 SP1 TRANSFAC yes 70850198
chr19 42444760 42444765 SP1 TRANSFAC yes 113396207
chr19 42444769 42444773 LFA1 TRANSFAC yes 70850199
chr19 42444769 42444773 LFA1 TRANSFAC yes 113396208
chr19 42444782 42444793 E2F4 JASPAR yes 70850200
chr19 42444782 42444793 E2F4 JASPAR yes 113396209
chr19 42444783 42444788 SP1 TRANSFAC yes 70850201
chr19 42444783 42444788 SP1 TRANSFAC yes 113396210
chr19 42444783 42444789 SP1 TRANSFAC yes 70850202
chr19 42444783 42444789 SP1 TRANSFAC yes 113396211
chr19 42444787 42444793 MAZ TRANSFAC yes 70850203
chr19 42444787 42444793 MAZ TRANSFAC yes 113396212
chr19 42444826 42444841 FOXP1 JASPAR yes 70850204
chr19 42444826 42444841 FOXP1 JASPAR yes 113396213
chr19 42444827 42444848 IRF1 JASPAR yes 70850205
chr19 42444827 42444848 IRF1 JASPAR yes 113396214
chr19 42444828 42444833 ETS2 TRANSFAC yes 70850206
chr19 42444828 42444833 ETS2 TRANSFAC yes 113396215
chr19 42444829 42444844 IRF9 JASPAR yes 70850207
chr19 42444829 42444844 IRF9 JASPAR yes 113396216
chr19 42444830 42444851 ZNF263 JASPAR yes 70850208
chr19 42444830 42444851 ZNF263 JASPAR yes 113396217
chr19 42444831 42444845 STAT1 JASPAR yes 70850209
chr19 42444831 42444845 STAT1 JASPAR yes 113396218
chr19 42444831 42444846 PRDM1 JASPAR yes 70850210
chr19 42444831 42444846 STAT2 JASPAR yes 70850211
chr19 42444831 42444846 PRDM1 JASPAR yes 113396219
chr19 42444831 42444846 STAT2 JASPAR yes 113396220
chr19 42444831 42444849 IRF2 JASPAR yes 70850212
chr19 42444831 42444849 IRF2 JASPAR yes 113396221
chr19 42444832 42444853 ZNF263 JASPAR yes 70850213
chr19 42444832 42444853 ZNF263 JASPAR yes 113396222
chr19 42444833 42444854 IRF1 JASPAR yes 70850214
chr19 42444833 42444854 IRF1 JASPAR yes 113396223
chr19 42444839 42444850 E2F1 JASPAR yes 70850215
chr19 42444839 42444850 E2F1 JASPAR yes 113396224
chr19 42444840 42444851 E2F4 JASPAR yes 70850216
chr19 42444840 42444851 E2F6 JASPAR yes 70850217
chr19 42444840 42444851 E2F4 JASPAR yes 113396225
chr19 42444840 42444851 E2F6 JASPAR yes 113396226
chr19 42444840 42444855 ZIC3 JASPAR yes 70850218
chr19 42444840 42444855 ZIC3 JASPAR yes 113396227
chr19 42444844 42444850 MAZ TRANSFAC yes 70850219
chr19 42444844 42444850 MAZ TRANSFAC yes 113396228
chr19 42444849 42444854 SP1 TRANSFAC yes 70850220
chr19 42444849 42444854 SP1 TRANSFAC yes 113396229
chr19 42444849 42444863 PLAG1 JASPAR yes 70850221
chr19 42444849 42444863 PLAG1 JASPAR yes 113396230
chr19 42444891 42444896 SP1 TRANSFAC yes 70850222
chr19 42444891 42444896 SP1 TRANSFAC yes 113396231
chr19 42444891 42444897 SP1 TRANSFAC yes 70850223
chr19 42444891 42444897 SP1 TRANSFAC yes 113396232
chr19 42444907 42444912 SP1 TRANSFAC yes 70850224
chr19 42444907 42444912 SP1 TRANSFAC yes 113396233
chr19 42444907 42444918 E2F4 JASPAR yes 70850225
chr19 42444907 42444918 E2F6 JASPAR yes 70850226
chr19 42444907 42444918 E2F4 JASPAR yes 113396234
chr19 42444907 42444918 E2F6 JASPAR yes 113396235
chr19 42444908 42444913 SP1 TRANSFAC yes 70850227
chr19 42444908 42444913 SP1 TRANSFAC yes 113396236
chr19 42444918 42444939 ZNF263 JASPAR yes 70850228
chr19 42444918 42444939 ZNF263 JASPAR yes 113396237
chr19 42444925 42444930 NFY TRANSFAC yes 70850229
chr19 42444925 42444930 NFY TRANSFAC yes 113396238
chr19 42444928 42444945 ZNF410 JASPAR yes 70850230
chr19 42444928 42444945 ZNF410 JASPAR yes 113396239
chr19 42444935 42444945 SP1 JASPAR yes 70850231
chr19 42444935 42444945 SP1 JASPAR yes 113396240
chr19 42444936 42444946 SP1 JASPAR yes 70850232
chr19 42444936 42444946 SP1 JASPAR yes 113396241
chr19 42444937 42444943 MAZ TRANSFAC yes 70850233
chr19 42444937 42444943 MAZ TRANSFAC yes 113396242
chr19 42444959 42444969 SP1 JASPAR yes 70850234
chr19 42444959 42444969 SP1 JASPAR yes 113396243
chr19 42444970 42444976 SP1 TRANSFAC yes 70850235
chr19 42444970 42444976 SP1 TRANSFAC yes 113396244
chr19 42444971 42444976 SP1 TRANSFAC yes 70850236
chr19 42444971 42444976 SP1 TRANSFAC yes 113396245
chr19 42444972 42444977 SP1 TRANSFAC yes 70850237
chr19 42444972 42444977 SP1 TRANSFAC yes 113396246
chr19 42444972 42444978 SP1 TRANSFAC yes 70850238
chr19 42444972 42444978 SP1 TRANSFAC yes 113396247
chr19 42444977 42444998 ZNF263 JASPAR yes 70850239
chr19 42444977 42444998 ZNF263 JASPAR yes 113396248
chr19 42444983 42444988 ETS2 TRANSFAC yes 70850240
chr19 42444983 42444988 ETS2 TRANSFAC yes 113396249
chr19 42444993 42445000 SP1 TRANSFAC yes 70850241
chr19 42444993 42445000 SP1 TRANSFAC yes 113396250
chr19 42444993 42445003 SP1 JASPAR yes 70850242
chr19 42444993 42445003 SP1 JASPAR yes 113396251
chr19 42444995 42445000 SP1 TRANSFAC yes 70850243
chr19 42444995 42445000 SP1 TRANSFAC yes 113396252
chr19 42444998 42445010 HINFP JASPAR yes 70850244
chr19 42444998 42445010 HINFP JASPAR yes 113396253
chr19 42445003 42445015 TFAP2A JASPAR yes 70850245
chr19 42445003 42445015 TFAP2B JASPAR yes 70850246
chr19 42445003 42445015 TFAP2C JASPAR yes 70850247
chr19 42445003 42445015 TFAP2A JASPAR yes 113396254
chr19 42445003 42445015 TFAP2B JASPAR yes 113396255
chr19 42445003 42445015 TFAP2C JASPAR yes 113396256
chr19 42445003 42445018 TFAP2A JASPAR yes 70850248
chr19 42445003 42445018 TFAP2A JASPAR yes 113396257
chr19 42445004 42445015 TFAP2A JASPAR yes 70850249
chr19 42445004 42445015 TFAP2B JASPAR yes 70850250
chr19 42445004 42445015 TFAP2C JASPAR yes 70850251
chr19 42445004 42445015 TFAP2A JASPAR yes 113396258
chr19 42445004 42445015 TFAP2B JASPAR yes 113396259
chr19 42445004 42445015 TFAP2C JASPAR yes 113396260
chr19 42445005 42445014 TFAP2A JASPAR yes 70850252
chr19 42445005 42445014 TFAP2A JASPAR yes 113396261
chr19 42445019 42445031 HINFP JASPAR yes 70850253
chr19 42445019 42445031 HINFP JASPAR yes 113396262
chr19 42445025 42445035 SP1 JASPAR yes 70850254
chr19 42445025 42445035 SP1 JASPAR yes 113396263
chr19 42445026 42445032 SP1 TRANSFAC yes 70850255
chr19 42445026 42445032 SP1 TRANSFAC yes 113396264
SNP sites on vista29457[chr19:42444727-42445027]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29457[chr19:42444727-42445027]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42341148 42348760 - LYPD4 ENSG00000183103.6 42348760 0.9 1.0 17589 4033
chr19 42348806 42356401 + DMRTC2 ENSG00000142025.11 42348806 0.93 0.98 17590 4079
chr19 42363988 42376994 + RPS19 ENSG00000105372.2 42363988 0.8 1.0 17591 19261
chr19 42381190 42385439 + CD79A ENSG00000105369.5 42381190 0.96 0.92 17592 36463
chr19 42387228 42434302 + ARHGEF1 ENSG00000076928.13 42387228 0.84 1.0 17593 42501
chr19 42460833 42463542 - RABAC1 ENSG00000105404.6 42463542 0.64 1.0 17594 81485
chr19 42470734 42501649 - ATP1A3 ENSG00000105409.11 42501649 0.99 1.0 17595 43378
Expression level of Genes
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miRNAs possibly regulated by vista29457[chr19:42444727-42445027]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results