EnhancerDB
  1. Home
  2. Enhancers
  3. vista29464[chr19:42532310-42532673]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29464[chr19:42532310-42532673]
Back to top
Tissue distribution of vista29464
Back to top
Transcription factor that possibly regulate vista29464[chr19:42532310-42532673]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42532364 42532975 CTCF UCSC Txn Factor no Conserved 108411832
chr19 42532363 42532367 YY1 TRANSFAC yes 70850526
chr19 42532380 42532394 SPI1 JASPAR yes 70850527
chr19 42532380 42532394 SPIC JASPAR yes 70850528
chr19 42532381 42532394 ELF1 JASPAR yes 70850529
chr19 42532383 42532394 ELF5 JASPAR yes 70850530
chr19 42532398 42532412 XBP1 JASPAR yes 70850531
chr19 42532406 42532413 USF2 TRANSFAC yes 70850532
chr19 42532408 42532413 USF2 TRANSFAC yes 70850533
chr19 42532419 42532429 ZNF740 JASPAR yes 70850534
chr19 42532420 42532430 SP1 JASPAR yes 70850535
chr19 42532420 42532430 ZNF740 JASPAR yes 70850536
chr19 42532421 42532431 SP1 JASPAR yes 70850537
chr19 42532421 42532431 ZNF740 JASPAR yes 70850538
chr19 42532422 42532432 SP1 JASPAR yes 70850539
chr19 42532422 42532432 ZNF740 JASPAR yes 70850540
chr19 42532423 42532433 ZNF740 JASPAR yes 70850541
chr19 42532424 42532434 SP1 JASPAR yes 70850542
chr19 42532424 42532434 ZNF740 JASPAR yes 70850543
chr19 42532442 42532454 TFAP2C JASPAR yes 70850544
chr19 42532444 42532459 NFYB JASPAR yes 70850545
chr19 42532446 42532459 DUXA JASPAR yes 70850546
chr19 42532446 42532462 NFYA JASPAR yes 70850547
chr19 42532447 42532458 DUX4 JASPAR yes 70850548
chr19 42532447 42532465 NFYA JASPAR yes 70850549
chr19 42532451 42532455 H1TF2 TRANSFAC yes 70850550
chr19 42532451 42532455 NFE TRANSFAC yes 70850551
chr19 42532451 42532455 SRF TRANSFAC yes 70850552
chr19 42532459 42532469 NKX2-3 JASPAR yes 70850553
chr19 42532516 42532526 OLIG3 JASPAR yes 70850554
chr19 42532554 42532573 CTCF JASPAR yes 70850555
chr19 42532555 42532561 NFIC JASPAR yes 70850556
chr19 42532557 42532561 H1TF2 TRANSFAC yes 70850557
chr19 42532557 42532561 NFE TRANSFAC yes 70850558
chr19 42532557 42532561 SRF TRANSFAC yes 70850559
chr19 42532557 42532563 NFYC TRANSFAC yes 70850560
chr19 42532564 42532578 PLAG1 JASPAR yes 70850561
chr19 42532570 42532581 E2F1 JASPAR yes 70850562
chr19 42532579 42532592 SMAD2 JASPAR yes 70850563
chr19 42532590 42532611 ZNF263 JASPAR yes 70850564
chr19 42532591 42532598 CEBPA TRANSFAC yes 70850565
chr19 42532592 42532603 E2F6 JASPAR yes 70850566
chr19 42532596 42532601 ETS2 TRANSFAC yes 70850567
chr19 42532610 42532621 FLI1 JASPAR yes 70850568
chr19 42532610 42532631 ZNF263 JASPAR yes 70850569
chr19 42532612 42532620 EHF JASPAR yes 70850570
chr19 42532617 42532621 NFE TRANSFAC yes 70850571
chr19 42532622 42532643 ZNF263 JASPAR yes 70850572
chr19 42532624 42532635 E2F6 JASPAR yes 70850573
chr19 42532625 42532646 ZNF263 JASPAR yes 70850574
chr19 42532631 42532652 ZNF263 JASPAR yes 70850575
chr19 42532645 42532651 NFE2 TRANSFAC yes 70850576
chr19 42532648 42532654 SP1 TRANSFAC yes 70850577
SNP sites on vista29464[chr19:42532310-42532673]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29464[chr19:42532310-42532673]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42460833 42463542 - RABAC1 ENSG00000105404.6 42463542 0.64 1.0 17594 31232
chr19 42470734 42501649 - ATP1A3 ENSG00000105409.11 42501649 0.99 1.0 17595 69339
chr19 42502473 42573650 - GRIK5 ENSG00000105737.5 42573650 0.85 1.0 17596 59023
chr19 42572629 42585701 + ZNF574 ENSG00000105732.9 42572629 0.64 1.0 17597 60044
Expression level of Genes
Back to top
miRNAs possibly regulated by vista29464[chr19:42532310-42532673]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results