EnhancerDB
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  3. vista29470[chr19:42654657-42654924]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29470[chr19:42654657-42654924]
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Tissue distribution of vista29470
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Transcription factor that possibly regulate vista29470[chr19:42654657-42654924]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42654647 42654659 PKNOX2 JASPAR yes 70850858
chr19 42654647 42654659 PKNOX2 JASPAR yes 113406869
chr19 42654654 42654665 CDX2 JASPAR yes 70850859
chr19 42654654 42654665 CDX2 JASPAR yes 113406870
chr19 42654655 42654666 HOXA10 JASPAR yes 70850860
chr19 42654655 42654666 HOXA10 JASPAR yes 113406871
chr19 42654655 42654671 SOX4 JASPAR yes 70850861
chr19 42654655 42654671 SOX4 JASPAR yes 113406872
chr19 42654656 42654665 CDX1 JASPAR yes 70850862
chr19 42654656 42654665 CDX1 JASPAR yes 113406873
chr19 42654656 42654666 HOXA13 JASPAR yes 70850863
chr19 42654656 42654666 HOXB13 JASPAR yes 70850864
chr19 42654656 42654666 HOXD13 JASPAR yes 70850865
chr19 42654656 42654666 HOXA13 JASPAR yes 113406874
chr19 42654656 42654666 HOXB13 JASPAR yes 113406875
chr19 42654656 42654666 HOXD13 JASPAR yes 113406876
chr19 42654667 42654677 HOXA13 JASPAR yes 70850866
chr19 42654667 42654677 HOXA13 JASPAR yes 113406877
chr19 42654667 42654678 HOXA10 JASPAR yes 70850867
chr19 42654667 42654678 HOXA10 JASPAR yes 113406878
chr19 42654668 42654677 CDX1 JASPAR yes 70850868
chr19 42654668 42654677 CDX1 JASPAR yes 113406879
chr19 42654668 42654679 CDX2 JASPAR yes 70850869
chr19 42654668 42654679 CDX2 JASPAR yes 113406880
chr19 42654671 42654686 STAT1 JASPAR yes 70850870
chr19 42654671 42654686 STAT1 JASPAR yes 113406881
chr19 42654672 42654681 NFIX JASPAR yes 70850871
chr19 42654672 42654681 NFIX JASPAR yes 113406882
chr19 42654672 42654682 NFIA JASPAR yes 70850872
chr19 42654672 42654682 NFIA JASPAR yes 113406883
chr19 42654674 42654680 NFIC JASPAR yes 70850873
chr19 42654674 42654680 NFIC JASPAR yes 113406884
chr19 42654681 42654691 TFCP2 JASPAR yes 70850874
chr19 42654681 42654691 TFCP2 JASPAR yes 113406885
chr19 42654695 42654709 PLAG1 JASPAR yes 70850875
chr19 42654695 42654709 PLAG1 JASPAR yes 113406886
chr19 42654705 42654710 SP1 TRANSFAC yes 70850876
chr19 42654705 42654710 SP1 TRANSFAC yes 113406887
chr19 42654705 42654712 SP1 TRANSFAC yes 70850877
chr19 42654705 42654712 SP1 TRANSFAC yes 113406888
chr19 42654705 42654719 PLAG1 JASPAR yes 70850878
chr19 42654705 42654719 PLAG1 JASPAR yes 113406889
chr19 42654707 42654722 ZIC4 JASPAR yes 70850879
chr19 42654707 42654722 ZIC4 JASPAR yes 113406890
chr19 42654779 42654784 SP1 TRANSFAC yes 70850880
chr19 42654779 42654784 SP1 TRANSFAC yes 113406891
chr19 42654780 42654795 NR2C2 JASPAR yes 70850881
chr19 42654780 42654795 NR2C2 JASPAR yes 113406892
chr19 42654780 42654801 ZNF263 JASPAR yes 70850882
chr19 42654780 42654801 ZNF263 JASPAR yes 113406893
chr19 42654781 42654791 SP1 JASPAR yes 70850883
chr19 42654781 42654791 SP1 JASPAR yes 113406894
chr19 42654782 42654792 SP1 JASPAR yes 70850884
chr19 42654782 42654792 SP1 JASPAR yes 113406895
chr19 42654784 42654805 ZNF263 JASPAR yes 70850885
chr19 42654784 42654805 ZNF263 JASPAR yes 113406896
chr19 42654785 42654800 NR2C2 JASPAR yes 70850886
chr19 42654785 42654800 NR2C2 JASPAR yes 113406897
chr19 42654786 42654800 PLAG1 JASPAR yes 70850887
chr19 42654786 42654800 PLAG1 JASPAR yes 113406898
chr19 42654786 42654806 RREB1 JASPAR yes 70850888
chr19 42654786 42654806 RREB1 JASPAR yes 113406899
chr19 42654787 42654801 PLAG1 JASPAR yes 70850889
chr19 42654787 42654801 PLAG1 JASPAR yes 113406900
chr19 42654787 42654808 ZNF263 JASPAR yes 70850890
chr19 42654787 42654808 ZNF263 JASPAR yes 113406901
chr19 42654792 42654813 ZNF263 JASPAR yes 70850891
chr19 42654792 42654813 ZNF263 JASPAR yes 113406902
chr19 42654794 42654804 ZNF740 JASPAR yes 70850892
chr19 42654794 42654804 ZNF740 JASPAR yes 113406903
chr19 42654796 42654806 SP1 JASPAR yes 70850893
chr19 42654796 42654806 SP1 JASPAR yes 113406904
chr19 42654798 42654804 SP1 TRANSFAC yes 70850894
chr19 42654798 42654804 SP1 TRANSFAC yes 113406905
chr19 42654798 42654819 ZNF263 JASPAR yes 70850895
chr19 42654798 42654819 ZNF263 JASPAR yes 113406906
chr19 42654803 42654813 SP1 JASPAR yes 70850896
chr19 42654803 42654813 SP1 JASPAR yes 113406907
chr19 42654806 42654821 NR2C2 JASPAR yes 70850897
chr19 42654806 42654821 NR2C2 JASPAR yes 113406908
chr19 42654807 42654828 ZNF263 JASPAR yes 70850898
chr19 42654807 42654828 ZNF263 JASPAR yes 113406909
chr19 42654814 42654829 PRDM1 JASPAR yes 70850899
chr19 42654814 42654829 PRDM1 JASPAR yes 113406910
chr19 42654854 42654858 YY1 TRANSFAC yes 70850900
chr19 42654854 42654858 YY1 TRANSFAC yes 113406911
chr19 42654868 42654872 YY1 TRANSFAC yes 70850901
chr19 42654868 42654872 YY1 TRANSFAC yes 113406912
chr19 42654868 42654889 ZNF263 JASPAR yes 70850902
chr19 42654868 42654889 ZNF263 JASPAR yes 113406913
chr19 42654874 42654895 ZNF263 JASPAR yes 70850903
chr19 42654874 42654895 ZNF263 JASPAR yes 113406914
chr19 42654892 42654907 FOXP1 JASPAR yes 70850904
chr19 42654892 42654907 FOXP1 JASPAR yes 113406915
chr19 42654893 42654904 FOXP2 JASPAR yes 70850905
chr19 42654893 42654904 FOXP2 JASPAR yes 113406916
chr19 42654894 42654909 FOXP1 JASPAR yes 70850906
chr19 42654894 42654909 FOXP1 JASPAR yes 113406917
chr19 42654896 42654911 FOXP1 JASPAR yes 70850907
chr19 42654896 42654911 FOXP1 JASPAR yes 113406918
chr19 42654902 42654923 IRF1 JASPAR yes 70850908
chr19 42654902 42654923 IRF1 JASPAR yes 113406919
SNP sites on vista29470[chr19:42654657-42654924]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29470[chr19:42654657-42654924]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42502473 42573650 - GRIK5 ENSG00000105737.5 42573650 0.85 1.0 17596 18993
chr19 42572629 42585701 + ZNF574 ENSG00000105732.9 42572629 0.64 1.0 17597 17972
chr19 42590263 42700737 - POU2F2 ENSG00000028277.16 42700737 0.92 0.99 17598 54187
chr19 42702750 42724292 - DEDD2 ENSG00000160570.9 42724292 0.59 1.0 17599 30632
chr19 42724423 42732353 + ZNF526 ENSG00000167625.6 42724423 0.55 0.99 17600 30501
chr19 42734338 42746777 - GSK3A ENSG00000105723.7 42746777 0.69 0.99 17601 8147
chr19 42746927 42749125 + AC006486.1 ENSG00000204957.1 42746927 0.81 1.0 17603 7997
Expression level of Genes
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miRNAs possibly regulated by vista29470[chr19:42654657-42654924]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results