EnhancerDB
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  3. vista29472[chr19:42710307-42710321]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29472[chr19:42710307-42710321]
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Tissue distribution of vista29472
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Transcription factor that possibly regulate vista29472[chr19:42710307-42710321]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42710300 42710314 POU1F1 JASPAR yes 70850920
chr19 42710300 42710314 POU1F1 JASPAR yes 113411078
chr19 42710301 42710318 ZNF410 JASPAR yes 70850921
chr19 42710301 42710318 ZNF410 JASPAR yes 113411079
chr19 42710307 42710322 FOXP1 JASPAR yes 70850922
chr19 42710307 42710322 FOXP1 JASPAR yes 113411080
chr19 42710308 42710319 HOXA10 JASPAR yes 70850923
chr19 42710308 42710319 HOXA10 JASPAR yes 113411081
chr19 42710309 42710318 CDX1 JASPAR yes 70850924
chr19 42710309 42710318 CDX1 JASPAR yes 113411082
chr19 42710309 42710319 HOXA13 JASPAR yes 70850925
chr19 42710309 42710319 HOXB13 JASPAR yes 70850926
chr19 42710309 42710319 HOXD13 JASPAR yes 70850927
chr19 42710309 42710319 HOXA13 JASPAR yes 113411083
chr19 42710309 42710319 HOXB13 JASPAR yes 113411084
chr19 42710309 42710319 HOXD13 JASPAR yes 113411085
chr19 42710309 42710324 FOXP1 JASPAR yes 70850928
chr19 42710309 42710324 MEF2C JASPAR yes 70850929
chr19 42710309 42710324 FOXP1 JASPAR yes 113411086
chr19 42710309 42710324 MEF2C JASPAR yes 113411087
chr19 42710309 42710330 IRF1 JASPAR yes 70850930
chr19 42710309 42710330 IRF1 JASPAR yes 113411088
chr19 42710311 42710326 FOXP1 JASPAR yes 70850931
chr19 42710311 42710326 FOXP1 JASPAR yes 113411089
chr19 42710312 42710327 FOXP1 JASPAR yes 70850932
chr19 42710312 42710327 FOXP1 JASPAR yes 113411090
chr19 42710312 42710333 IRF1 JASPAR yes 70850933
chr19 42710312 42710333 IRF1 JASPAR yes 113411091
chr19 42710313 42710319 TBP TRANSFAC yes 70850934
chr19 42710313 42710319 TBP TRANSFAC yes 113411092
chr19 42710313 42710328 FOXP1 JASPAR yes 70850935
chr19 42710313 42710328 FOXP1 JASPAR yes 113411093
chr19 42710314 42710329 FOXP1 JASPAR yes 70850936
chr19 42710314 42710329 FOXP1 JASPAR yes 113411094
chr19 42710314 42710335 IRF1 JASPAR yes 70850937
chr19 42710314 42710335 IRF1 JASPAR yes 113411095
chr19 42710315 42710330 FOXP1 JASPAR yes 70850938
chr19 42710315 42710330 FOXP1 JASPAR yes 113411096
SNP sites on vista29472[chr19:42710307-42710321]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29472[chr19:42710307-42710321]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42590263 42700737 - POU2F2 ENSG00000028277.16 42700737 0.92 0.99 17598 90430
chr19 42702750 42724292 - DEDD2 ENSG00000160570.9 42724292 0.59 1.0 17599 86029
chr19 42724423 42732353 + ZNF526 ENSG00000167625.6 42724423 0.55 0.99 17600 85898
chr19 42734338 42746777 - GSK3A ENSG00000105723.7 42746777 0.69 0.99 17601 63544
chr19 42738735 42759284 - AC006486.9 ENSG00000268643.1 42759284 0.92 0.89 17602 51037
chr19 42746927 42749125 + AC006486.1 ENSG00000204957.1 42746927 0.81 1.0 17603 63394
chr19 42751724 42759309 - ERF ENSG00000105722.5 42759309 0.66 1.0 17604 51012
chr19 42772689 42799949 + CIC ENSG00000079432.3 42772689 0.72 1.0 17605 37632
chr19 42801185 42807698 - PAFAH1B3 ENSG00000079462.3 42807698 0.75 1.0 17606 2623
chr19 42806250 42814973 + PRR19 ENSG00000188368.5 42806250 0.76 1.0 17607 4071
Expression level of Genes
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miRNAs possibly regulated by vista29472[chr19:42710307-42710321]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results