EnhancerDB
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  3. vista29475[chr19:42750338-42750718]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29475[chr19:42750338-42750718]
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Tissue distribution of vista29475
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Transcription factor that possibly regulate vista29475[chr19:42750338-42750718]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42750271 42750735 MAZ UCSC Txn Factor no Conserved 108412081
chr19 42750278 42750702 CTCF UCSC Txn Factor no Conserved 108412083
chr19 42750398 42750654 RAD21 UCSC Txn Factor no Conserved 108412102
chr19 42750334 42750338 H4TF2 TRANSFAC yes 70851088
chr19 42750334 42750338 H4TF2 TRANSFAC yes 113413288
chr19 42750356 42750377 ZNF263 JASPAR yes 70851089
chr19 42750356 42750377 ZNF263 JASPAR yes 113413289
chr19 42750360 42750370 SP1 JASPAR yes 70851090
chr19 42750360 42750370 SP1 JASPAR yes 113413290
chr19 42750368 42750388 RREB1 JASPAR yes 70851091
chr19 42750368 42750388 RREB1 JASPAR yes 113413291
chr19 42750369 42750389 RREB1 JASPAR yes 70851092
chr19 42750369 42750389 RREB1 JASPAR yes 113413292
chr19 42750370 42750380 SREBF1 JASPAR yes 70851093
chr19 42750370 42750380 SREBF2 JASPAR yes 70851094
chr19 42750370 42750380 SREBF1 JASPAR yes 113413293
chr19 42750370 42750380 SREBF2 JASPAR yes 113413294
chr19 42750371 42750391 RREB1 JASPAR yes 70851095
chr19 42750371 42750391 RREB1 JASPAR yes 113413295
chr19 42750372 42750392 RREB1 JASPAR yes 70851096
chr19 42750372 42750392 RREB1 JASPAR yes 113413296
chr19 42750374 42750394 RREB1 JASPAR yes 70851097
chr19 42750374 42750394 RREB1 JASPAR yes 113413297
chr19 42750375 42750395 RREB1 JASPAR yes 70851098
chr19 42750375 42750395 RREB1 JASPAR yes 113413298
chr19 42750377 42750397 RREB1 JASPAR yes 70851099
chr19 42750377 42750397 RREB1 JASPAR yes 113413299
chr19 42750378 42750390 ZBTB7C JASPAR yes 70851100
chr19 42750378 42750390 ZBTB7C JASPAR yes 113413300
chr19 42750378 42750398 RREB1 JASPAR yes 70851101
chr19 42750378 42750398 RREB1 JASPAR yes 113413301
chr19 42750381 42750393 ZBTB7C JASPAR yes 70851102
chr19 42750381 42750393 ZBTB7C JASPAR yes 113413302
chr19 42750391 42750403 NHLH1 JASPAR yes 70851103
chr19 42750391 42750403 NHLH1 JASPAR yes 113413303
chr19 42750404 42750419 RFX5 JASPAR yes 70851104
chr19 42750404 42750419 RFX5 JASPAR yes 113413304
chr19 42750416 42750428 PKNOX2 JASPAR yes 70851105
chr19 42750416 42750428 TGIF1 JASPAR yes 70851106
chr19 42750416 42750428 TGIF2 JASPAR yes 70851107
chr19 42750416 42750428 PKNOX2 JASPAR yes 113413305
chr19 42750416 42750428 TGIF1 JASPAR yes 113413306
chr19 42750416 42750428 TGIF2 JASPAR yes 113413307
chr19 42750419 42750430 NFE2 JASPAR yes 70851108
chr19 42750419 42750430 NFE2 JASPAR yes 113413308
chr19 42750420 42750429 JDP2 JASPAR yes 70851109
chr19 42750420 42750429 JDP2 JASPAR yes 113413309
chr19 42750434 42750445 STAT3 JASPAR yes 70851110
chr19 42750434 42750445 STAT3 JASPAR yes 113413310
chr19 42750434 42750449 HSF1 JASPAR yes 70851111
chr19 42750434 42750449 MEF2C JASPAR yes 70851112
chr19 42750434 42750449 HSF1 JASPAR yes 113413311
chr19 42750434 42750449 MEF2C JASPAR yes 113413312
chr19 42750435 42750450 MEF2A JASPAR yes 70851113
chr19 42750435 42750450 MEF2A JASPAR yes 113413313
chr19 42750446 42750460 PLAG1 JASPAR yes 70851114
chr19 42750446 42750460 PLAG1 JASPAR yes 113413314
chr19 42750458 42750472 EBF1 JASPAR yes 70851115
chr19 42750458 42750472 EBF1 JASPAR yes 113413315
chr19 42750472 42750483 NFIL3 JASPAR yes 70851116
chr19 42750472 42750483 NFIL3 JASPAR yes 113413316
chr19 42750473 42750485 HLF JASPAR yes 70851117
chr19 42750473 42750485 JDP2 JASPAR yes 70851118
chr19 42750473 42750485 HLF JASPAR yes 113413317
chr19 42750473 42750485 JDP2 JASPAR yes 113413318
chr19 42750473 42750486 ATF4 JASPAR yes 70851119
chr19 42750473 42750486 ATF4 JASPAR yes 113413319
chr19 42750473 42750488 JUND JASPAR yes 70851120
chr19 42750473 42750488 JUND JASPAR yes 113413320
chr19 42750474 42750487 JUN JASPAR yes 70851121
chr19 42750474 42750487 JUN JASPAR yes 113413321
chr19 42750476 42750497 REST JASPAR yes 70851122
chr19 42750476 42750497 REST JASPAR yes 113413322
chr19 42750477 42750496 REST JASPAR yes 70851123
chr19 42750477 42750496 REST JASPAR yes 113413323
chr19 42750481 42750500 CTCF JASPAR yes 70851124
chr19 42750481 42750500 CTCF JASPAR yes 113413324
chr19 42750500 42750507 E2F1 TRANSFAC yes 70851125
chr19 42750500 42750507 E2F1 TRANSFAC yes 113413325
chr19 42750500 42750508 E2F1 JASPAR yes 70851126
chr19 42750500 42750508 E2F1 JASPAR yes 113413326
chr19 42750526 42750537 FLI1 JASPAR yes 70851127
chr19 42750526 42750537 FLI1 JASPAR yes 113413327
chr19 42750528 42750542 E2F7 JASPAR yes 70851128
chr19 42750528 42750542 E2F7 JASPAR yes 113413328
chr19 42750533 42750542 THAP1 JASPAR yes 70851129
chr19 42750533 42750542 THAP1 JASPAR yes 113413329
chr19 42750540 42750545 GATA2 JASPAR yes 70851130
chr19 42750540 42750545 GATA2 JASPAR yes 113413330
chr19 42750567 42750573 NFIC JASPAR yes 70851131
chr19 42750567 42750573 NFIC JASPAR yes 113413331
chr19 42750584 42750596 ZBTB7A JASPAR yes 70851132
chr19 42750584 42750596 ZBTB7A JASPAR yes 113413332
chr19 42750585 42750597 GLI2 JASPAR yes 70851133
chr19 42750585 42750597 ZBTB7B JASPAR yes 70851134
chr19 42750585 42750597 ZBTB7C JASPAR yes 70851135
chr19 42750585 42750597 GLI2 JASPAR yes 113413333
chr19 42750585 42750597 ZBTB7B JASPAR yes 113413334
chr19 42750585 42750597 ZBTB7C JASPAR yes 113413335
chr19 42750630 42750645 RFX5 JASPAR yes 70851136
chr19 42750630 42750645 RFX5 JASPAR yes 113413336
chr19 42750631 42750636 MYC TRANSFAC yes 70851137
chr19 42750631 42750636 MYC TRANSFAC yes 113413337
chr19 42750651 42750661 MZF1 JASPAR yes 70851138
chr19 42750651 42750661 MZF1 JASPAR yes 113413338
chr19 42750651 42750666 TFAP2C JASPAR yes 70851139
chr19 42750651 42750666 TFAP2C JASPAR yes 113413339
chr19 42750652 42750665 TFAP2B JASPAR yes 70851140
chr19 42750652 42750665 TFAP2B JASPAR yes 113413340
chr19 42750681 42750692 YY2 JASPAR yes 70851141
chr19 42750681 42750692 YY2 JASPAR yes 113413341
SNP sites on vista29475[chr19:42750338-42750718]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29475[chr19:42750338-42750718]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42590263 42700737 - POU2F2 ENSG00000028277.16 42700737 0.92 0.99 17598 50399
chr19 42702750 42724292 - DEDD2 ENSG00000160570.9 42724292 0.59 1.0 17599 73954
chr19 42724423 42732353 + ZNF526 ENSG00000167625.6 42724423 0.55 0.99 17600 74085
chr19 42734338 42746777 - GSK3A ENSG00000105723.7 42746777 0.69 0.99 17601 96439
chr19 42738735 42759284 - AC006486.9 ENSG00000268643.1 42759284 0.92 0.89 17602 91434
chr19 42746927 42749125 + AC006486.1 ENSG00000204957.1 42746927 0.81 1.0 17603 96589
chr19 42751724 42759309 - ERF ENSG00000105722.5 42759309 0.66 1.0 17604 91409
chr19 42772689 42799949 + CIC ENSG00000079432.3 42772689 0.72 1.0 17605 78029
chr19 42801185 42807698 - PAFAH1B3 ENSG00000079462.3 42807698 0.75 1.0 17606 43020
chr19 42806250 42814973 + PRR19 ENSG00000188368.5 42806250 0.76 1.0 17607 44468
chr19 42817477 42829214 + TMEM145 ENSG00000167619.7 42817477 0.83 1.0 17608 33241
chr19 42829761 42882921 + MEGF8 ENSG00000105429.8 42829761 0.77 1.0 17609 20957
Expression level of Genes
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miRNAs possibly regulated by vista29475[chr19:42750338-42750718]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results