EnhancerDB
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  3. vista29477[chr19:42756723-42757090]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29477[chr19:42756723-42757090]
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Tissue distribution of vista29477
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Transcription factor that possibly regulate vista29477[chr19:42756723-42757090]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42756658 42759582 POLR2A UCSC Txn Factor no Conserved 108412118
chr19 42756807 42757202 MAX UCSC Txn Factor no Conserved 108412123
chr19 42756711 42756732 REST JASPAR yes 70851153
chr19 42756711 42756732 REST JASPAR yes 113413977
chr19 42756728 42756739 HOXC13 JASPAR yes 70851154
chr19 42756728 42756739 HOXC13 JASPAR yes 113413979
chr19 42756741 42756760 RFX2 JASPAR yes 70851155
chr19 42756741 42756760 RFX2 JASPAR yes 113413980
chr19 42756754 42756760 SP1 TRANSFAC yes 70851156
chr19 42756754 42756760 SP1 TRANSFAC yes 113413981
chr19 42756754 42756764 SP1 JASPAR yes 70851157
chr19 42756754 42756764 SP1 JASPAR yes 113413982
chr19 42756755 42756770 TFAP2C JASPAR yes 70851158
chr19 42756755 42756770 TFAP2C JASPAR yes 113413983
chr19 42756758 42756769 EBF1 JASPAR yes 70851159
chr19 42756758 42756769 EBF1 JASPAR yes 113413984
chr19 42756769 42756784 HNF4A JASPAR yes 70851160
chr19 42756769 42756784 HNF4A JASPAR yes 113413985
chr19 42756776 42756789 SMAD2 JASPAR yes 70851161
chr19 42756776 42756789 SMAD2 JASPAR yes 113413986
chr19 42756777 42756796 CTCF JASPAR yes 70851162
chr19 42756777 42756796 CTCF JASPAR yes 113413987
chr19 42756803 42756809 MZF1 JASPAR yes 70851163
chr19 42756803 42756809 MZF1 JASPAR yes 113413988
chr19 42756829 42756839 REL JASPAR yes 70851164
chr19 42756829 42756839 REL JASPAR yes 113413989
chr19 42756875 42756889 GLIS2 JASPAR yes 70851165
chr19 42756875 42756889 GLIS3 JASPAR yes 70851166
chr19 42756875 42756889 GLIS2 JASPAR yes 113413990
chr19 42756875 42756889 GLIS3 JASPAR yes 113413991
chr19 42756876 42756886 ZNF740 JASPAR yes 70851167
chr19 42756876 42756886 ZNF740 JASPAR yes 113413992
chr19 42756877 42756887 ZNF740 JASPAR yes 70851168
chr19 42756877 42756887 ZNF740 JASPAR yes 113413993
chr19 42756878 42756888 SP1 JASPAR yes 70851169
chr19 42756878 42756888 ZNF740 JASPAR yes 70851170
chr19 42756878 42756888 SP1 JASPAR yes 113413994
chr19 42756878 42756888 ZNF740 JASPAR yes 113413995
chr19 42756879 42756889 SP1 JASPAR yes 70851171
chr19 42756879 42756889 ZNF740 JASPAR yes 70851172
chr19 42756879 42756889 SP1 JASPAR yes 113413996
chr19 42756879 42756889 ZNF740 JASPAR yes 113413997
chr19 42756880 42756890 SP1 JASPAR yes 70851173
chr19 42756880 42756890 ZNF740 JASPAR yes 70851174
chr19 42756880 42756890 SP1 JASPAR yes 113413998
chr19 42756880 42756890 ZNF740 JASPAR yes 113413999
chr19 42756880 42756901 ZNF263 JASPAR yes 70851175
chr19 42756880 42756901 ZNF263 JASPAR yes 113414000
chr19 42756883 42756904 ZNF263 JASPAR yes 70851176
chr19 42756883 42756904 ZNF263 JASPAR yes 113414001
chr19 42756886 42756907 ZNF263 JASPAR yes 70851177
chr19 42756886 42756907 ZNF263 JASPAR yes 113414002
chr19 42756898 42756910 CREB1 JASPAR yes 70851178
chr19 42756898 42756910 CREB1 JASPAR yes 113414003
chr19 42756898 42756913 JUND JASPAR yes 70851179
chr19 42756898 42756913 JUND JASPAR yes 113414004
chr19 42756899 42756912 JUN JASPAR yes 70851180
chr19 42756899 42756912 JUN JASPAR yes 113414005
chr19 42756900 42756914 ATF7 JASPAR yes 70851181
chr19 42756900 42756914 BATF3 JASPAR yes 70851182
chr19 42756900 42756914 ATF7 JASPAR yes 113414006
chr19 42756900 42756914 BATF3 JASPAR yes 113414007
chr19 42756901 42756913 JDP2 JASPAR yes 70851183
chr19 42756901 42756913 JDP2 JASPAR yes 113414008
chr19 42756903 42756908 ATF1 TRANSFAC yes 70851184
chr19 42756903 42756908 ATF1 TRANSFAC yes 113414009
chr19 42756903 42756911 CREB1 JASPAR yes 70851185
chr19 42756903 42756911 CREB1 JASPAR yes 113414010
chr19 42756905 42756910 ATF1 TRANSFAC yes 70851186
chr19 42756905 42756910 ATF1 TRANSFAC yes 113414011
chr19 42756913 42756927 PLAG1 JASPAR yes 70851187
chr19 42756913 42756927 PLAG1 JASPAR yes 113414012
chr19 42756920 42756940 PPARG JASPAR yes 70851188
chr19 42756920 42756940 PPARG JASPAR yes 113414013
chr19 42756921 42756941 PPARG JASPAR yes 70851189
chr19 42756921 42756941 PPARG JASPAR yes 113414014
chr19 42756929 42756944 TFAP2C JASPAR yes 70851190
chr19 42756929 42756944 TFAP2C JASPAR yes 113414015
chr19 42756933 42756939 MZF1 JASPAR yes 70851191
chr19 42756933 42756939 MZF1 JASPAR yes 113414016
chr19 42756951 42756964 SMAD2 JASPAR yes 70851192
chr19 42756951 42756964 SMAD2 JASPAR yes 113414017
chr19 42756964 42756968 LFA1 TRANSFAC yes 70851193
chr19 42756964 42756968 LFA1 TRANSFAC yes 113414018
chr19 42757001 42757011 CLOCK JASPAR yes 70851194
chr19 42757001 42757011 MAX JASPAR yes 70851195
chr19 42757001 42757011 MNT JASPAR yes 70851196
chr19 42757001 42757011 CLOCK JASPAR yes 113414019
chr19 42757001 42757011 MAX JASPAR yes 113414020
chr19 42757001 42757011 MNT JASPAR yes 113414021
chr19 42757002 42757009 USF1 JASPAR yes 70851197
chr19 42757002 42757009 USF1 JASPAR yes 113414022
chr19 42757002 42757012 MAX JASPAR yes 70851198
chr19 42757002 42757012 MAX JASPAR yes 113414023
chr19 42757003 42757008 MYC TRANSFAC yes 70851199
chr19 42757003 42757008 USF1 TRANSFAC yes 70851200
chr19 42757003 42757008 USF2 TRANSFAC yes 70851201
chr19 42757003 42757008 MYC TRANSFAC yes 113414024
chr19 42757003 42757008 USF1 TRANSFAC yes 113414025
chr19 42757003 42757008 USF2 TRANSFAC yes 113414026
chr19 42757018 42757029 NFKB1 JASPAR yes 70851202
chr19 42757018 42757029 NFKB1 JASPAR yes 113414027
chr19 42757038 42757044 PEA3 TRANSFAC yes 70851203
chr19 42757073 42757087 PLAG1 JASPAR yes 70851204
chr19 42757074 42757079 SP1 TRANSFAC yes 70851205
SNP sites on vista29477[chr19:42756723-42757090]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29477[chr19:42756723-42757090]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42590263 42700737 - POU2F2 ENSG00000028277.16 42700737 0.92 0.99 17598 44014
chr19 42702750 42724292 - DEDD2 ENSG00000160570.9 42724292 0.59 1.0 17599 67569
chr19 42724423 42732353 + ZNF526 ENSG00000167625.6 42724423 0.55 0.99 17600 67700
chr19 42734338 42746777 - GSK3A ENSG00000105723.7 42746777 0.69 0.99 17601 90054
chr19 42738735 42759284 - AC006486.9 ENSG00000268643.1 42759284 0.92 0.89 17602 97806
chr19 42746927 42749125 + AC006486.1 ENSG00000204957.1 42746927 0.81 1.0 17603 90204
chr19 42751724 42759309 - ERF ENSG00000105722.5 42759309 0.66 1.0 17604 97781
chr19 42772689 42799949 + CIC ENSG00000079432.3 42772689 0.72 1.0 17605 84401
chr19 42801185 42807698 - PAFAH1B3 ENSG00000079462.3 42807698 0.75 1.0 17606 49392
chr19 42806250 42814973 + PRR19 ENSG00000188368.5 42806250 0.76 1.0 17607 50840
chr19 42817477 42829214 + TMEM145 ENSG00000167619.7 42817477 0.83 1.0 17608 39613
chr19 42829761 42882921 + MEGF8 ENSG00000105429.8 42829761 0.77 1.0 17609 27329
Expression level of Genes
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miRNAs possibly regulated by vista29477[chr19:42756723-42757090]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results