EnhancerDB
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  3. vista29482[chr19:42784087-42784212]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29482[chr19:42784087-42784212]
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Tissue distribution of vista29482
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Transcription factor that possibly regulate vista29482[chr19:42784087-42784212]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 42783853 42785138 POLR2A UCSC Txn Factor no Conserved 108412505
chr19 42783853 42785138 POLR2A UCSC Txn Factor no Conserved 108412506
chr19 42783896 42784270 CTCF UCSC Txn Factor no Conserved 108412508
chr19 42783911 42784919 ZBTB7A UCSC Txn Factor no Conserved 108412512
chr19 42783911 42784919 ZBTB7A UCSC Txn Factor no Conserved 108412513
chr19 42783926 42784204 RAD21 UCSC Txn Factor no Conserved 108412516
chr19 42783989 42784284 NRF1 UCSC Txn Factor no Conserved 108412538
chr19 42784082 42784095 SMAD2 JASPAR yes 70851474
chr19 42784082 42784095 SMAD2 JASPAR yes 113414798
chr19 42784084 42784103 CTCF JASPAR yes 70851475
chr19 42784084 42784103 CTCF JASPAR yes 113414799
chr19 42784093 42784104 E2F1 JASPAR yes 70851476
chr19 42784093 42784104 E2F1 JASPAR yes 113414800
chr19 42784101 42784106 SP1 TRANSFAC yes 70851477
chr19 42784101 42784106 SP1 TRANSFAC yes 113414801
chr19 42784108 42784113 SP1 TRANSFAC yes 70851478
chr19 42784108 42784113 SP1 TRANSFAC yes 113414802
chr19 42784124 42784135 NRF1 JASPAR yes 70851479
chr19 42784124 42784135 NRF1 JASPAR yes 113414803
chr19 42784125 42784136 NRF1 JASPAR yes 70851480
chr19 42784125 42784136 NRF1 JASPAR yes 113414804
chr19 42784126 42784134 NRF1 TRANSFAC yes 70851481
chr19 42784126 42784134 NRF1 TRANSFAC yes 113414805
chr19 42784130 42784141 E2F1 JASPAR yes 70851482
chr19 42784130 42784141 E2F1 JASPAR yes 113414806
chr19 42784134 42784154 RREB1 JASPAR yes 70851483
chr19 42784134 42784154 RREB1 JASPAR yes 113414807
chr19 42784141 42784156 NR2C2 JASPAR yes 70851484
chr19 42784141 42784156 NR2C2 JASPAR yes 113414808
chr19 42784145 42784155 ZNF740 JASPAR yes 70851485
chr19 42784145 42784155 ZNF740 JASPAR yes 113414809
chr19 42784153 42784173 PPARG JASPAR yes 70851486
chr19 42784153 42784173 PPARG JASPAR yes 113414810
chr19 42784179 42784191 MEF2B JASPAR yes 70851487
chr19 42784179 42784191 MEF2B JASPAR yes 113414811
chr19 42784193 42784197 YY1 TRANSFAC yes 70851488
chr19 42784193 42784197 YY1 TRANSFAC yes 113414812
chr19 42784193 42784201 HOXA5 JASPAR yes 70851489
chr19 42784193 42784201 HOXA5 JASPAR yes 113414813
chr19 42784204 42784210 MAZ TRANSFAC yes 70851490
chr19 42784204 42784210 MAZ TRANSFAC yes 113414814
chr19 42784204 42784215 E2F6 JASPAR yes 70851491
chr19 42784204 42784215 E2F6 JASPAR yes 113414815
SNP sites on vista29482[chr19:42784087-42784212]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29482[chr19:42784087-42784212]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 42590263 42700737 - POU2F2 ENSG00000028277.16 42700737 0.92 0.99 17598 16650
chr19 42702750 42724292 - DEDD2 ENSG00000160570.9 42724292 0.59 1.0 17599 40205
chr19 42724423 42732353 + ZNF526 ENSG00000167625.6 42724423 0.55 0.99 17600 40336
chr19 42734338 42746777 - GSK3A ENSG00000105723.7 42746777 0.69 0.99 17601 62690
chr19 42738735 42759284 - AC006486.9 ENSG00000268643.1 42759284 0.92 0.89 17602 75197
chr19 42746927 42749125 + AC006486.1 ENSG00000204957.1 42746927 0.81 1.0 17603 62840
chr19 42751724 42759309 - ERF ENSG00000105722.5 42759309 0.66 1.0 17604 75222
chr19 42772689 42799949 + CIC ENSG00000079432.3 42772689 0.72 1.0 17605 88602
chr19 42801185 42807698 - PAFAH1B3 ENSG00000079462.3 42807698 0.75 1.0 17606 76514
chr19 42806250 42814973 + PRR19 ENSG00000188368.5 42806250 0.76 1.0 17607 77962
chr19 42817477 42829214 + TMEM145 ENSG00000167619.7 42817477 0.83 1.0 17608 66735
chr19 42829761 42882921 + MEGF8 ENSG00000105429.8 42829761 0.77 1.0 17609 54451
Expression level of Genes
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miRNAs possibly regulated by vista29482[chr19:42784087-42784212]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results