EnhancerDB
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  3. vista29516[chr19:44137942-44138031]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29516[chr19:44137942-44138031]
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Tissue distribution of vista29516
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Transcription factor that possibly regulate vista29516[chr19:44137942-44138031]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 44137937 44137948 E2F6 JASPAR yes 70853020
chr19 44137937 44137948 E2F6 JASPAR yes 113467372
chr19 44137940 44137948 TBX15 JASPAR yes 70853021
chr19 44137940 44137948 TBX15 JASPAR yes 113467373
chr19 44137958 44137974 RFX4 JASPAR yes 70853022
chr19 44137958 44137974 RFX4 JASPAR yes 113467374
chr19 44137987 44137996 HIC2 JASPAR yes 70853023
chr19 44137987 44137996 HIC2 JASPAR yes 113467375
chr19 44137993 44138003 POU6F2 JASPAR yes 70853024
chr19 44137993 44138003 POU6F2 JASPAR yes 113467376
chr19 44137994 44138004 ALX3 JASPAR yes 70853025
chr19 44137994 44138004 EMX1 JASPAR yes 70853026
chr19 44137994 44138004 EMX2 JASPAR yes 70853027
chr19 44137994 44138004 ESX1 JASPAR yes 70853028
chr19 44137994 44138004 GBX2 JASPAR yes 70853029
chr19 44137994 44138004 GSX1 JASPAR yes 70853030
chr19 44137994 44138004 GSX2 JASPAR yes 70853031
chr19 44137994 44138004 HESX1 JASPAR yes 70853032
chr19 44137994 44138004 HOXB2 JASPAR yes 70853033
chr19 44137994 44138004 HOXB3 JASPAR yes 70853034
chr19 44137994 44138004 LBX2 JASPAR yes 70853035
chr19 44137994 44138004 LHX2 JASPAR yes 70853036
chr19 44137994 44138004 LHX6 JASPAR yes 70853037
chr19 44137994 44138004 MEOX1 JASPAR yes 70853038
chr19 44137994 44138004 MEOX2 JASPAR yes 70853039
chr19 44137994 44138004 MIXL1 JASPAR yes 70853040
chr19 44137994 44138004 MNX1 JASPAR yes 70853041
chr19 44137994 44138004 NOTO JASPAR yes 70853042
chr19 44137994 44138004 RAX JASPAR yes 70853043
chr19 44137994 44138004 ALX3 JASPAR yes 113467377
chr19 44137994 44138004 EMX1 JASPAR yes 113467378
chr19 44137994 44138004 EMX2 JASPAR yes 113467379
chr19 44137994 44138004 ESX1 JASPAR yes 113467380
chr19 44137994 44138004 GBX2 JASPAR yes 113467381
chr19 44137994 44138004 GSX1 JASPAR yes 113467382
chr19 44137994 44138004 GSX2 JASPAR yes 113467383
chr19 44137994 44138004 HESX1 JASPAR yes 113467384
chr19 44137994 44138004 HOXB2 JASPAR yes 113467385
chr19 44137994 44138004 HOXB3 JASPAR yes 113467386
chr19 44137994 44138004 LBX2 JASPAR yes 113467387
chr19 44137994 44138004 LHX2 JASPAR yes 113467388
chr19 44137994 44138004 LHX6 JASPAR yes 113467389
chr19 44137994 44138004 MEOX1 JASPAR yes 113467390
chr19 44137994 44138004 MEOX2 JASPAR yes 113467391
chr19 44137994 44138004 MIXL1 JASPAR yes 113467392
chr19 44137994 44138004 MNX1 JASPAR yes 113467393
chr19 44137994 44138004 NOTO JASPAR yes 113467394
chr19 44137994 44138004 RAX JASPAR yes 113467395
chr19 44137994 44138005 HOXA10 JASPAR yes 70853044
chr19 44137994 44138005 HOXA10 JASPAR yes 113467396
chr19 44137995 44138003 BSX JASPAR yes 70853045
chr19 44137995 44138003 DLX6 JASPAR yes 70853046
chr19 44137995 44138003 EN1 JASPAR yes 70853047
chr19 44137995 44138003 ISX JASPAR yes 70853048
chr19 44137995 44138003 LBX1 JASPAR yes 70853049
chr19 44137995 44138003 LHX9 JASPAR yes 70853050
chr19 44137995 44138003 LMX1A JASPAR yes 70853051
chr19 44137995 44138003 LMX1B JASPAR yes 70853052
chr19 44137995 44138003 NKX6-1 JASPAR yes 70853053
chr19 44137995 44138003 NKX6-2 JASPAR yes 70853054
chr19 44137995 44138003 PAX4 JASPAR yes 70853055
chr19 44137995 44138003 PDX1 JASPAR yes 70853056
chr19 44137995 44138003 PRRX1 JASPAR yes 70853057
chr19 44137995 44138003 RAX2 JASPAR yes 70853058
chr19 44137995 44138003 SHOX JASPAR yes 70853059
chr19 44137995 44138003 UNCX JASPAR yes 70853060
chr19 44137995 44138003 VAX1 JASPAR yes 70853061
chr19 44137995 44138003 VAX2 JASPAR yes 70853062
chr19 44137995 44138003 VSX1 JASPAR yes 70853063
chr19 44137995 44138003 VSX2 JASPAR yes 70853064
chr19 44137995 44138003 BSX JASPAR yes 113467397
chr19 44137995 44138003 DLX6 JASPAR yes 113467398
chr19 44137995 44138003 EN1 JASPAR yes 113467399
chr19 44137995 44138003 ISX JASPAR yes 113467400
chr19 44137995 44138003 LBX1 JASPAR yes 113467401
chr19 44137995 44138003 LHX9 JASPAR yes 113467402
chr19 44137995 44138003 LMX1A JASPAR yes 113467403
chr19 44137995 44138003 LMX1B JASPAR yes 113467404
chr19 44137995 44138003 NKX6-1 JASPAR yes 113467405
chr19 44137995 44138003 NKX6-2 JASPAR yes 113467406
chr19 44137995 44138003 PAX4 JASPAR yes 113467407
chr19 44137995 44138003 PDX1 JASPAR yes 113467408
chr19 44137995 44138003 PRRX1 JASPAR yes 113467409
chr19 44137995 44138003 RAX2 JASPAR yes 113467410
chr19 44137995 44138003 SHOX JASPAR yes 113467411
chr19 44137995 44138003 UNCX JASPAR yes 113467412
chr19 44137995 44138003 VAX1 JASPAR yes 113467413
chr19 44137995 44138003 VAX2 JASPAR yes 113467414
chr19 44137995 44138003 VSX1 JASPAR yes 113467415
chr19 44137995 44138003 VSX2 JASPAR yes 113467416
chr19 44137995 44138005 HOXB13 JASPAR yes 70853065
chr19 44137995 44138005 HOXD13 JASPAR yes 70853066
chr19 44137995 44138005 HOXB13 JASPAR yes 113467417
chr19 44137995 44138005 HOXD13 JASPAR yes 113467418
chr19 44137998 44138013 FOXP1 JASPAR yes 70853067
chr19 44137998 44138013 FOXP1 JASPAR yes 113467419
chr19 44137999 44138014 FOXP1 JASPAR yes 70853068
chr19 44137999 44138014 FOXP1 JASPAR yes 113467420
chr19 44138000 44138006 TBP TRANSFAC yes 70853069
chr19 44138000 44138006 TBP TRANSFAC yes 113467421
chr19 44138000 44138015 FOXP1 JASPAR yes 70853070
chr19 44138000 44138015 FOXP1 JASPAR yes 113467422
chr19 44138013 44138028 FOXP1 JASPAR yes 70853071
chr19 44138013 44138028 FOXP1 JASPAR yes 113467423
chr19 44138014 44138029 FOXP1 JASPAR yes 70853072
chr19 44138014 44138029 FOXP1 JASPAR yes 113467424
chr19 44138015 44138030 FOXP1 JASPAR yes 70853073
chr19 44138015 44138030 FOXP1 JASPAR yes 113467425
chr19 44138016 44138031 FOXP1 JASPAR yes 70853074
chr19 44138016 44138031 FOXP1 JASPAR yes 113467426
SNP sites on vista29516[chr19:44137942-44138031]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29516[chr19:44137942-44138031]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 44047192 44084625 - XRCC1 ENSG00000073050.7 44084625 0.63 1.0 17629 46683
chr19 44058844 44097188 - L34079.2 ENSG00000268361.1 44097188 1.0 1.0 17630 59246
chr19 44080952 44088116 + PINLYP ENSG00000234465.6 44080952 0.7 0.98 17631 43010
chr19 44088521 44100287 - IRGQ ENSG00000167378.4 44100287 0.63 0.99 17632 62345
chr19 44100544 44105309 + ZNF576 ENSG00000124444.11 44100544 0.68 0.99 17633 62602
chr19 44100769 44118649 + SRRM5 ENSG00000226763.3 44100769 0.71 1.0 17634 62827
chr19 44111371 44124026 - ZNF428 ENSG00000131116.7 44124026 0.73 1.0 17635 86084
chr19 44126520 44143991 - CADM4 ENSG00000105767.2 44143991 0.84 1.0 17636 94040
chr19 44150247 44174699 - PLAUR ENSG00000011422.7 44174699 0.86 1.0 17637 63332
chr19 44220162 44224173 + IRGC ENSG00000124449.6 44220162 0.76 1.0 17638 17869
Expression level of Genes
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miRNAs possibly regulated by vista29516[chr19:44137942-44138031]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results