EnhancerDB
  1. Home
  2. Enhancers
  3. vista2952[chr1:111996023-111996307]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2952[chr1:111996023-111996307]
Back to top
Tissue distribution of vista2952
Back to top
Transcription factor that possibly regulate vista2952[chr1:111996023-111996307]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 111996023 111996038 FOXP1 JASPAR yes 118351687
chr1 111996024 111996030 TBP TRANSFAC yes 118351688
chr1 111996024 111996039 FOXP1 JASPAR yes 118351689
chr1 111996025 111996040 FOXP1 JASPAR yes 118351690
chr1 111996025 111996046 IRF1 JASPAR yes 118351691
chr1 111996026 111996041 FOXP1 JASPAR yes 118351692
chr1 111996026 111996047 IRF1 JASPAR yes 118351693
chr1 111996027 111996042 FOXP1 JASPAR yes 118351694
chr1 111996029 111996044 FOXP1 JASPAR yes 118351695
chr1 111996040 111996048 GATA3 JASPAR yes 118351696
chr1 111996061 111996070 THAP1 JASPAR yes 118351697
chr1 111996064 111996068 LFA1 TRANSFAC yes 118351698
chr1 111996083 111996095 TAL1 JASPAR yes 118351699
chr1 111996083 111996096 ZBTB18 JASPAR yes 118351700
chr1 111996085 111996095 MYF6 JASPAR yes 118351701
chr1 111996085 111996095 NEUROG2 JASPAR yes 118351702
chr1 111996085 111996095 OLIG1 JASPAR yes 118351703
chr1 111996085 111996095 OLIG3 JASPAR yes 118351704
chr1 111996085 111996097 TAL1 JASPAR yes 118351705
chr1 111996094 111996108 RORA JASPAR yes 118351706
chr1 111996108 111996122 GATA2 JASPAR yes 118351707
chr1 111996112 111996120 GATA5 JASPAR yes 118351708
chr1 111996122 111996143 IRF1 JASPAR yes 118351709
chr1 111996126 111996144 IRF2 JASPAR yes 118351710
chr1 111996128 111996149 IRF1 JASPAR yes 118351711
chr1 111996149 111996161 PBX1 JASPAR yes 118351712
chr1 111996159 111996170 STAT1 JASPAR yes 118351713
chr1 111996159 111996170 STAT3 JASPAR yes 118351714
chr1 111996171 111996182 DMRT3 JASPAR yes 118351715
chr1 111996186 111996192 TCF1 TRANSFAC yes 118351716
chr1 111996198 111996208 ALX3 JASPAR yes 118351717
chr1 111996198 111996208 MEOX2 JASPAR yes 118351718
chr1 111996199 111996207 LBX1 JASPAR yes 118351719
chr1 111996199 111996207 PDX1 JASPAR yes 118351720
chr1 111996199 111996207 VAX1 JASPAR yes 118351721
chr1 111996199 111996207 VAX2 JASPAR yes 118351722
chr1 111996199 111996207 VSX1 JASPAR yes 118351723
chr1 111996199 111996207 VSX2 JASPAR yes 118351724
chr1 111996229 111996240 NFIL3 JASPAR yes 118351725
chr1 111996242 111996250 FOXO3 JASPAR yes 118351726
chr1 111996252 111996266 TCF7L2 JASPAR yes 118351727
chr1 111996277 111996281 H4TF2 TRANSFAC yes 118351728
SNP sites on vista2952[chr1:111996023-111996307]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 111996123 rs145974251 C T
IRF1
558959
Genes possibly regulated by vista2952[chr1:111996023-111996307]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 111956936 111970399 - OVGP1 ENSG00000085465.11 111970399 0.95 1.0 1013 74376
chr1 111982512 111991998 - WDR77 ENSG00000116455.9 111991998 0.82 0.98 1014 95975
chr1 111991486 112005395 + ATP5F1 ENSG00000116459.6 111991486 0.83 0.99 1015 95463
chr1 112016414 112021134 + C1orf162 ENSG00000143110.7 112016414 0.89 1.0 1016 79893
chr1 112084840 112259313 + RAP1A ENSG00000116473.10 112084840 0.71 0.99 1018 11467
Expression level of Genes
Back to top
miRNAs possibly regulated by vista2952[chr1:111996023-111996307]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results