EnhancerDB
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  3. vista2953[chr1:112013331-112014031]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2953[chr1:112013331-112014031]
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Tissue distribution of vista2953
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Transcription factor that possibly regulate vista2953[chr1:112013331-112014031]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 112013812 112013984 EBF1 UCSC Txn Factor no Conserved 107822133
chr1 112013339 112013343 NFE TRANSFAC yes 118351729
chr1 112013339 112013352 SMAD2 JASPAR yes 118351730
chr1 112013382 112013396 SPIC JASPAR yes 118351731
chr1 112013383 112013394 FOS JASPAR yes 118351732
chr1 112013384 112013395 FOSL2 JASPAR yes 118351733
chr1 112013384 112013395 JUNB JASPAR yes 118351734
chr1 112013385 112013396 BATF JASPAR yes 118351735
chr1 112013386 112013396 POU6F2 JASPAR yes 118351736
chr1 112013390 112013394 YY1 TRANSFAC yes 118351737
chr1 112013394 112013399 MYB TRANSFAC yes 118351738
chr1 112013410 112013417 MEIS1 JASPAR yes 118351739
chr1 112013410 112013418 MEIS2 JASPAR yes 118351740
chr1 112013410 112013418 MEIS3 JASPAR yes 118351741
chr1 112013417 112013438 REST JASPAR yes 118351742
chr1 112013434 112013437 MYB TRANSFAC yes 118351743
chr1 112013445 112013461 POU4F2 JASPAR yes 118351744
chr1 112013445 112013461 POU4F3 JASPAR yes 118351745
chr1 112013446 112013456 PAX3 JASPAR yes 118351746
chr1 112013446 112013456 PAX7 JASPAR yes 118351747
chr1 112013447 112013462 HNF1A JASPAR yes 118351748
chr1 112013448 112013458 EMX1 JASPAR yes 118351749
chr1 112013448 112013458 EMX2 JASPAR yes 118351750
chr1 112013448 112013458 ESX1 JASPAR yes 118351751
chr1 112013448 112013458 GBX1 JASPAR yes 118351752
chr1 112013448 112013458 GBX2 JASPAR yes 118351753
chr1 112013448 112013458 GSX1 JASPAR yes 118351754
chr1 112013448 112013458 GSX2 JASPAR yes 118351755
chr1 112013448 112013458 HESX1 JASPAR yes 118351756
chr1 112013448 112013458 HOXB2 JASPAR yes 118351757
chr1 112013448 112013458 HOXB3 JASPAR yes 118351758
chr1 112013448 112013458 LBX2 JASPAR yes 118351759
chr1 112013448 112013458 LHX2 JASPAR yes 118351760
chr1 112013448 112013458 LHX6 JASPAR yes 118351761
chr1 112013448 112013458 MEOX1 JASPAR yes 118351762
chr1 112013448 112013458 MEOX2 JASPAR yes 118351763
chr1 112013448 112013458 MIXL1 JASPAR yes 118351764
chr1 112013448 112013458 MNX1 JASPAR yes 118351765
chr1 112013448 112013458 NOTO JASPAR yes 118351766
chr1 112013448 112013458 POU6F1 JASPAR yes 118351767
chr1 112013448 112013458 RAX JASPAR yes 118351768
chr1 112013448 112013461 HNF1B JASPAR yes 118351769
chr1 112013449 112013457 BSX JASPAR yes 118351770
chr1 112013449 112013457 DLX6 JASPAR yes 118351771
chr1 112013449 112013457 EN1 JASPAR yes 118351772
chr1 112013449 112013457 ISX JASPAR yes 118351773
chr1 112013449 112013457 LBX1 JASPAR yes 118351774
chr1 112013449 112013457 LHX9 JASPAR yes 118351775
chr1 112013449 112013457 LMX1A JASPAR yes 118351776
chr1 112013449 112013457 LMX1B JASPAR yes 118351777
chr1 112013449 112013457 NKX6-1 JASPAR yes 118351778
chr1 112013449 112013457 NKX6-2 JASPAR yes 118351779
chr1 112013449 112013457 PAX4 JASPAR yes 118351780
chr1 112013449 112013457 PDX1 JASPAR yes 118351781
chr1 112013449 112013457 PRRX1 JASPAR yes 118351782
chr1 112013449 112013457 RAX2 JASPAR yes 118351783
chr1 112013449 112013457 SHOX JASPAR yes 118351784
chr1 112013449 112013457 UNCX JASPAR yes 118351785
chr1 112013449 112013457 VAX1 JASPAR yes 118351786
chr1 112013449 112013457 VAX2 JASPAR yes 118351787
chr1 112013449 112013457 VSX1 JASPAR yes 118351788
chr1 112013449 112013457 VSX2 JASPAR yes 118351789
chr1 112013449 112013459 POU6F2 JASPAR yes 118351790
chr1 112013450 112013460 PAX3 JASPAR yes 118351791
chr1 112013450 112013460 PAX7 JASPAR yes 118351792
chr1 112013450 112013461 PHOX2A JASPAR yes 118351793
chr1 112013452 112013462 HMBOX1 JASPAR yes 118351794
chr1 112013456 112013465 PITX3 JASPAR yes 118351795
chr1 112013456 112013466 GSC2 JASPAR yes 118351796
chr1 112013456 112013466 GSC JASPAR yes 118351797
chr1 112013457 112013465 OTX1 JASPAR yes 118351798
chr1 112013457 112013465 OTX2 JASPAR yes 118351799
chr1 112013489 112013510 ZNF263 JASPAR yes 118351800
chr1 112013491 112013496 ETS2 TRANSFAC yes 118351801
chr1 112013492 112013513 ZNF263 JASPAR yes 118351802
chr1 112013501 112013522 ZNF263 JASPAR yes 118351803
chr1 112013505 112013526 ZNF263 JASPAR yes 118351804
chr1 112013506 112013519 ELF1 JASPAR yes 118351805
chr1 112013506 112013520 SPI1 JASPAR yes 118351806
chr1 112013532 112013537 GATA1 TRANSFAC yes 118351807
chr1 112013532 112013547 LEF1 JASPAR yes 118351808
chr1 112013533 112013547 TCF7L2 JASPAR yes 118351809
chr1 112013536 112013542 LEF1 TRANSFAC yes 118351810
chr1 112013536 112013542 TCF4 TRANSFAC yes 118351811
chr1 112013558 112013563 GATA2 JASPAR yes 118351812
chr1 112013582 112013590 EHF JASPAR yes 118351813
chr1 112013646 112013650 YY1 TRANSFAC yes 118351814
chr1 112013666 112013677 DMRT3 JASPAR yes 118351815
chr1 112013694 112013709 MEF2A JASPAR yes 118351816
chr1 112013696 112013708 MEF2B JASPAR yes 118351817
chr1 112013712 112013726 TLX1 JASPAR yes 118351818
chr1 112013717 112013720 MYB TRANSFAC yes 118351819
chr1 112013723 112013727 H1TF2 TRANSFAC yes 118351820
chr1 112013723 112013727 NFE TRANSFAC yes 118351821
chr1 112013723 112013727 SRF TRANSFAC yes 118351822
chr1 112013751 112013763 HLF JASPAR yes 118351823
chr1 112013751 112013763 TEF JASPAR yes 118351824
chr1 112013769 112013783 BATF3 JASPAR yes 118351825
chr1 112013804 112013812 GATA3 JASPAR yes 118351826
chr1 112013817 112013823 MYC TRANSFAC yes 118351827
chr1 112013841 112013861 TP63 JASPAR yes 118351828
chr1 112013848 112013859 FLI1 JASPAR yes 118351829
chr1 112013850 112013858 EHF JASPAR yes 118351830
chr1 112013857 112013878 ZNF263 JASPAR yes 118351831
chr1 112013860 112013881 ZNF263 JASPAR yes 118351832
chr1 112013866 112013887 ZNF263 JASPAR yes 118351833
chr1 112013869 112013890 ZNF263 JASPAR yes 118351834
chr1 112013872 112013893 ZNF263 JASPAR yes 118351835
chr1 112013892 112013901 THAP1 JASPAR yes 118351836
chr1 112013906 112013920 CREB3L1 JASPAR yes 118351837
chr1 112013916 112013937 IRF1 JASPAR yes 118351838
chr1 112013918 112013929 FLI1 JASPAR yes 118351839
chr1 112013918 112013931 ELF3 JASPAR yes 118351840
chr1 112013919 112013929 ETV6 JASPAR yes 118351841
chr1 112013919 112013930 ELF5 JASPAR yes 118351842
chr1 112013919 112013930 ETV2 JASPAR yes 118351843
chr1 112013919 112013931 EHF JASPAR yes 118351844
chr1 112013919 112013931 ELF1 JASPAR yes 118351845
chr1 112013919 112013931 ELF4 JASPAR yes 118351846
chr1 112013919 112013932 ELF1 JASPAR yes 118351847
chr1 112013919 112013933 SPI1 JASPAR yes 118351848
chr1 112013919 112013933 SPIC JASPAR yes 118351849
chr1 112013920 112013927 SPI1 JASPAR yes 118351850
chr1 112013920 112013928 EHF JASPAR yes 118351851
chr1 112013920 112013934 IRF8 JASPAR yes 118351852
chr1 112013922 112013929 SPIB JASPAR yes 118351853
chr1 112013948 112013963 FOXP1 JASPAR yes 118351854
chr1 112013950 112013965 FOXP1 JASPAR yes 118351855
chr1 112013960 112013971 ESRRB JASPAR yes 118351856
chr1 112013965 112013983 RARA JASPAR yes 118351857
chr1 112013967 112013988 ZNF263 JASPAR yes 118351858
chr1 112013971 112013978 SPI1 JASPAR yes 118351859
chr1 112013979 112013987 EHF JASPAR yes 118351860
chr1 112013981 112013986 ETS2 TRANSFAC yes 118351861
chr1 112014013 112014028 LEF1 JASPAR yes 118351862
chr1 112014013 112014028 NR2C2 JASPAR yes 118351863
chr1 112014014 112014028 TCF7L2 JASPAR yes 118351864
chr1 112014020 112014031 NFKB1 JASPAR yes 118351865
SNP sites on vista2953[chr1:112013331-112014031]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 112013370 rs547538653 G A no 558993
chr1 112013425 rs17027754 T G
REST
558994
chr1 112013426 rs190848403 C T
REST
558995
chr1 112013427 rs570400270 G A
REST
558996
chr1 112013487 rs79859545 G A no 558997
chr1 112013498 rs528673954 CTGTGG C
ZNF263
558998
chr1 112013508 rs548838137 T TTCTTGCC
ELF1 SPI1 ZNF263
558999
chr1 112013535 rs6674837 A G
GATA1 LEF1 TCF7L2
559000
chr1 112013642 rs79661545 G A no 559001
chr1 112013758 rs141833919 G A
HLF TEF
559002
chr1 112013761 rs182996480 A T
HLF TEF
559003
chr1 112013795 rs77558823 T A no 559004
chr1 112013935 rs369167260 CTTTTGTCAAACTAGTCT C
EBF1 IRF1
559005
chr1 112013935 rs371235253 CTTTTGTCAAACTAGTCT C
EBF1 IRF1
559006
Genes possibly regulated by vista2953[chr1:112013331-112014031]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 111956936 111970399 - OVGP1 ENSG00000085465.11 111970399 0.95 1.0 1013 57068
chr1 111982512 111991998 - WDR77 ENSG00000116455.9 111991998 0.82 0.98 1014 78667
chr1 111991486 112005395 + ATP5F1 ENSG00000116459.6 111991486 0.83 0.99 1015 78155
chr1 112016414 112021134 + C1orf162 ENSG00000143110.7 112016414 0.89 1.0 1016 97617
chr1 112025970 112106584 - ADORA3 ENSG00000121933.13 112106584 0.72 0.99 1017 7447
chr1 112084840 112259313 + RAP1A ENSG00000116473.10 112084840 0.71 0.99 1018 29191
Expression level of Genes
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miRNAs possibly regulated by vista2953[chr1:112013331-112014031]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results