EnhancerDB
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  3. vista2954[chr1:112015702-112015900]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2954[chr1:112015702-112015900]
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Tissue distribution of vista2954
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Transcription factor that possibly regulate vista2954[chr1:112015702-112015900]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 112015702 112015717 FOXP1 JASPAR yes 118351866
chr1 112015702 112015723 IRF1 JASPAR yes 118351867
chr1 112015703 112015718 FOXP1 JASPAR yes 118351868
chr1 112015705 112015720 FOXP1 JASPAR yes 118351869
chr1 112015706 112015727 IRF1 JASPAR yes 118351870
chr1 112015707 112015722 FOXP1 JASPAR yes 118351871
chr1 112015708 112015729 IRF1 JASPAR yes 118351872
chr1 112015710 112015724 SPIC JASPAR yes 118351873
chr1 112015710 112015724 STAT1 JASPAR yes 118351874
chr1 112015710 112015725 PRDM1 JASPAR yes 118351875
chr1 112015710 112015725 STAT2 JASPAR yes 118351876
chr1 112015710 112015731 IRF1 JASPAR yes 118351877
chr1 112015712 112015733 IRF1 JASPAR yes 118351878
chr1 112015716 112015731 FOXP1 JASPAR yes 118351879
chr1 112015716 112015737 IRF1 JASPAR yes 118351880
chr1 112015717 112015732 FOXP1 JASPAR yes 118351881
chr1 112015720 112015735 STAT2 JASPAR yes 118351882
chr1 112015720 112015741 IRF1 JASPAR yes 118351883
chr1 112015721 112015736 FOXP1 JASPAR yes 118351884
chr1 112015721 112015742 IRF1 JASPAR yes 118351885
chr1 112015722 112015743 IRF1 JASPAR yes 118351886
chr1 112015726 112015741 FOXP1 JASPAR yes 118351887
chr1 112015726 112015747 IRF1 JASPAR yes 118351888
chr1 112015727 112015742 FOXP1 JASPAR yes 118351889
chr1 112015727 112015748 IRF1 JASPAR yes 118351890
chr1 112015728 112015743 FOXP1 JASPAR yes 118351891
chr1 112015731 112015746 STAT2 JASPAR yes 118351892
chr1 112015745 112015749 TEAD2 TRANSFAC yes 118351893
chr1 112015775 112015779 YY1 TRANSFAC yes 118351894
chr1 112015778 112015785 NKX3-1 JASPAR yes 118351895
chr1 112015781 112015791 EMX1 JASPAR yes 118351896
chr1 112015781 112015791 HOXB3 JASPAR yes 118351897
chr1 112015781 112015791 NOTO JASPAR yes 118351898
chr1 112015782 112015790 NKX6-1 JASPAR yes 118351899
chr1 112015782 112015790 NKX6-2 JASPAR yes 118351900
chr1 112015782 112015792 POU6F2 JASPAR yes 118351901
chr1 112015789 112015801 FOXI1 JASPAR yes 118351902
chr1 112015791 112015802 FOXB1 JASPAR yes 118351903
chr1 112015791 112015802 FOXC1 JASPAR yes 118351904
chr1 112015792 112015796 YY1 TRANSFAC yes 118351905
chr1 112015794 112015806 MEF2A JASPAR yes 118351906
chr1 112015794 112015806 MEF2B JASPAR yes 118351907
chr1 112015794 112015806 MEF2D JASPAR yes 118351908
chr1 112015805 112015809 YY1 TRANSFAC yes 118351909
chr1 112015813 112015825 FOXI1 JASPAR yes 118351910
chr1 112015819 112015829 MEF2A JASPAR yes 118351911
chr1 112015819 112015830 FOXB1 JASPAR yes 118351912
chr1 112015819 112015830 FOXC1 JASPAR yes 118351913
chr1 112015820 112015824 YY1 TRANSFAC yes 118351914
chr1 112015824 112015828 TEAD2 TRANSFAC yes 118351915
chr1 112015824 112015829 TBP TRANSFAC yes 118351916
chr1 112015829 112015835 HiNF-A TRANSFAC yes 118351917
chr1 112015844 112015858 TCF7L2 JASPAR yes 118351918
chr1 112015861 112015864 MYB TRANSFAC yes 118351919
chr1 112015868 112015879 TBX20 JASPAR yes 118351920
chr1 112015869 112015879 TBX21 JASPAR yes 118351921
chr1 112015870 112015873 MYB TRANSFAC yes 118351922
chr1 112015875 112015879 YY1 TRANSFAC yes 118351923
chr1 112015878 112015892 MTF1 JASPAR yes 118351924
SNP sites on vista2954[chr1:112015702-112015900]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 112015722 rs557383976 G A
FOXP1 IRF1 PRDM1 SPIC STAT1 STAT2
559010
chr1 112015732 rs112478375 GA G
FOXP1 IRF1 STAT2
559011
chr1 112015813 rs200818068 CAAAT C
FOXI1
559012
chr1 112015840 rs74869911 C T no 559013
chr1 112015861 rs2800885 T C
MYB
559014
Genes possibly regulated by vista2954[chr1:112015702-112015900]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 111956936 111970399 - OVGP1 ENSG00000085465.11 111970399 0.95 1.0 1013 54697
chr1 111982512 111991998 - WDR77 ENSG00000116455.9 111991998 0.82 0.98 1014 76296
chr1 111991486 112005395 + ATP5F1 ENSG00000116459.6 111991486 0.83 0.99 1015 75784
chr1 112016414 112021134 + C1orf162 ENSG00000143110.7 112016414 0.89 1.0 1016 99486
chr1 112025970 112106584 - ADORA3 ENSG00000121933.13 112106584 0.72 0.99 1017 9316
chr1 112084840 112259313 + RAP1A ENSG00000116473.10 112084840 0.71 0.99 1018 31060
Expression level of Genes
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miRNAs possibly regulated by vista2954[chr1:112015702-112015900]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results