EnhancerDB
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  3. vista2955[chr1:112039088-112039223]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2955[chr1:112039088-112039223]
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Tissue distribution of vista2955
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Transcription factor that possibly regulate vista2955[chr1:112039088-112039223]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 112039054 112039308 RUNX3 UCSC Txn Factor no Conserved 107822136
chr1 112039071 112039088 BCL6B JASPAR yes 31522859
chr1 112039071 112039088 BCL6B JASPAR yes 118351925
chr1 112039083 112039104 IRF1 JASPAR yes 31522860
chr1 112039083 112039104 IRF1 JASPAR yes 118351926
chr1 112039085 112039100 IRF9 JASPAR yes 31522861
chr1 112039085 112039100 IRF9 JASPAR yes 118351927
chr1 112039086 112039100 IRF7 JASPAR yes 31522862
chr1 112039086 112039100 IRF7 JASPAR yes 118351928
chr1 112039087 112039101 STAT1 JASPAR yes 31522863
chr1 112039087 112039101 STAT1 JASPAR yes 118351929
chr1 112039087 112039102 STAT2 JASPAR yes 31522864
chr1 112039087 112039102 STAT2 JASPAR yes 118351930
chr1 112039087 112039105 IRF2 JASPAR yes 31522865
chr1 112039087 112039105 IRF2 JASPAR yes 118351931
chr1 112039088 112039100 IRF1 JASPAR yes 31522866
chr1 112039088 112039100 IRF1 JASPAR yes 118351932
chr1 112039105 112039116 FOXA1 JASPAR yes 31522867
chr1 112039105 112039116 FOXA1 JASPAR yes 118351933
chr1 112039105 112039120 FOXA1 JASPAR yes 31522868
chr1 112039105 112039120 FOXA1 JASPAR yes 118351934
chr1 112039115 112039129 IRF7 JASPAR yes 31522869
chr1 112039115 112039129 IRF7 JASPAR yes 118351935
chr1 112039116 112039131 STAT2 JASPAR yes 31522870
chr1 112039116 112039131 STAT2 JASPAR yes 118351936
chr1 112039133 112039149 NFYA JASPAR yes 31522871
chr1 112039133 112039149 NFYA JASPAR yes 118351937
chr1 112039135 112039138 MYB TRANSFAC yes 31522872
chr1 112039135 112039138 MYB TRANSFAC yes 118351938
chr1 112039139 112039143 NFE TRANSFAC yes 31522873
chr1 112039139 112039143 NFE TRANSFAC yes 118351939
chr1 112039145 112039157 ZBTB7B JASPAR yes 31522874
chr1 112039145 112039157 ZBTB7C JASPAR yes 31522875
chr1 112039145 112039157 ZBTB7B JASPAR yes 118351940
chr1 112039145 112039157 ZBTB7C JASPAR yes 118351941
chr1 112039146 112039156 RUNX3 JASPAR yes 31522876
chr1 112039146 112039156 RUNX3 JASPAR yes 118351942
chr1 112039150 112039170 RREB1 JASPAR yes 31522877
chr1 112039150 112039170 RREB1 JASPAR yes 118351943
chr1 112039158 112039161 MYB TRANSFAC yes 31522878
chr1 112039158 112039161 MYB TRANSFAC yes 118351944
chr1 112039158 112039169 RUNX1 JASPAR yes 31522879
chr1 112039158 112039169 RUNX1 JASPAR yes 118351945
chr1 112039170 112039181 NFKB1 JASPAR yes 31522880
chr1 112039170 112039181 NFKB1 JASPAR yes 118351946
chr1 112039171 112039181 NFKB1 JASPAR yes 31522881
chr1 112039171 112039181 RELA JASPAR yes 31522882
chr1 112039171 112039181 REL JASPAR yes 31522883
chr1 112039171 112039181 NFKB1 JASPAR yes 118351947
chr1 112039171 112039181 RELA JASPAR yes 118351948
chr1 112039171 112039181 REL JASPAR yes 118351949
chr1 112039171 112039182 NFKB1 JASPAR yes 31522884
chr1 112039171 112039182 NFKB1 JASPAR yes 118351950
chr1 112039174 112039184 NFATC3 JASPAR yes 31522885
chr1 112039174 112039184 NFATC3 JASPAR yes 118351951
chr1 112039175 112039182 NFATC2 JASPAR yes 31522886
chr1 112039175 112039182 NFATC2 JASPAR yes 118351952
chr1 112039181 112039196 NFYB JASPAR yes 31522887
chr1 112039181 112039196 NFYB JASPAR yes 118351953
chr1 112039183 112039199 NFYA JASPAR yes 31522888
chr1 112039183 112039199 NFYA JASPAR yes 118351954
chr1 112039184 112039202 NFYA JASPAR yes 31522889
chr1 112039184 112039202 NFYA JASPAR yes 118351955
chr1 112039185 112039188 MYB TRANSFAC yes 31522890
chr1 112039185 112039188 MYB TRANSFAC yes 118351956
chr1 112039186 112039197 CDX2 JASPAR yes 31522891
chr1 112039186 112039197 CDX2 JASPAR yes 118351957
chr1 112039187 112039198 HOXA10 JASPAR yes 31522892
chr1 112039187 112039198 HOXA10 JASPAR yes 118351958
chr1 112039188 112039192 H1TF2 TRANSFAC yes 31522893
chr1 112039188 112039192 NFE TRANSFAC yes 31522894
chr1 112039188 112039192 SRF TRANSFAC yes 31522895
chr1 112039188 112039192 H1TF2 TRANSFAC yes 118351959
chr1 112039188 112039192 NFE TRANSFAC yes 118351960
chr1 112039188 112039192 SRF TRANSFAC yes 118351961
chr1 112039188 112039197 CDX1 JASPAR yes 31522896
chr1 112039188 112039197 CDX1 JASPAR yes 118351962
chr1 112039188 112039198 HOXA13 JASPAR yes 31522897
chr1 112039188 112039198 HOXB13 JASPAR yes 31522898
chr1 112039188 112039198 HOXD13 JASPAR yes 31522899
chr1 112039188 112039198 HOXA13 JASPAR yes 118351963
chr1 112039188 112039198 HOXB13 JASPAR yes 118351964
chr1 112039188 112039198 HOXD13 JASPAR yes 118351965
chr1 112039197 112039209 FOXC2 JASPAR yes 31522900
chr1 112039197 112039209 FOXC2 JASPAR yes 118351966
chr1 112039198 112039209 FOXC1 JASPAR yes 31522901
chr1 112039198 112039209 FOXC1 JASPAR yes 118351967
chr1 112039199 112039203 YY1 TRANSFAC yes 31522902
chr1 112039199 112039203 YY1 TRANSFAC yes 118351968
chr1 112039204 112039225 IRF1 JASPAR yes 31522903
chr1 112039204 112039225 IRF1 JASPAR yes 118351969
chr1 112039205 112039211 SOX10 JASPAR yes 31522904
chr1 112039205 112039211 SOX10 JASPAR yes 118351970
SNP sites on vista2955[chr1:112039088-112039223]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista2955[chr1:112039088-112039223]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 111956936 111970399 - OVGP1 ENSG00000085465.11 111970399 0.95 1.0 1013 31311
chr1 111982512 111991998 - WDR77 ENSG00000116455.9 111991998 0.82 0.98 1014 52910
chr1 111991486 112005395 + ATP5F1 ENSG00000116459.6 111991486 0.83 0.99 1015 52398
chr1 112016414 112021134 + C1orf162 ENSG00000143110.7 112016414 0.89 1.0 1016 77326
chr1 112025970 112106584 - ADORA3 ENSG00000121933.13 112106584 0.72 0.99 1017 32639
chr1 112084840 112259313 + RAP1A ENSG00000116473.10 112084840 0.71 0.99 1018 54383
Expression level of Genes
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miRNAs possibly regulated by vista2955[chr1:112039088-112039223]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results