EnhancerDB
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  3. vista29552[chr19:44821121-44821451]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29552[chr19:44821121-44821451]
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Tissue distribution of vista29552
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Transcription factor that possibly regulate vista29552[chr19:44821121-44821451]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 44821126 44821145 REST JASPAR yes 70855063
chr19 44821129 44821141 YY1 JASPAR yes 70855064
chr19 44821154 44821158 YY1 TRANSFAC yes 70855065
chr19 44821165 44821175 HOXA13 JASPAR yes 70855066
chr19 44821165 44821175 HOXB13 JASPAR yes 70855067
chr19 44821165 44821175 HOXD13 JASPAR yes 70855068
chr19 44821165 44821176 HOXA10 JASPAR yes 70855069
chr19 44821165 44821176 HOXD12 JASPAR yes 70855070
chr19 44821166 44821175 CDX1 JASPAR yes 70855071
chr19 44821166 44821177 CDX2 JASPAR yes 70855072
chr19 44821181 44821191 NFATC3 JASPAR yes 70855073
chr19 44821186 44821195 SOX9 JASPAR yes 70855074
chr19 44821203 44821217 PAX6 JASPAR yes 70855075
chr19 44821211 44821215 YY1 TRANSFAC yes 70855076
chr19 44821213 44821221 BSX JASPAR yes 70855077
chr19 44821218 44821222 LFA1 TRANSFAC yes 70855078
chr19 44821231 44821236 H4TF1 TRANSFAC yes 70855079
chr19 44821238 44821242 YY1 TRANSFAC yes 70855080
chr19 44821238 44821251 POU3F3 JASPAR yes 70855081
chr19 44821245 44821266 REST JASPAR yes 70855082
chr19 44821246 44821265 REST JASPAR yes 70855083
chr19 44821261 44821272 CDX2 JASPAR yes 70855084
chr19 44821262 44821273 FOXH1 JASPAR yes 70855085
chr19 44821262 44821273 HOXA10 JASPAR yes 70855086
chr19 44821263 44821272 CDX1 JASPAR yes 70855087
chr19 44821263 44821273 HOXA13 JASPAR yes 70855088
chr19 44821263 44821273 HOXB13 JASPAR yes 70855089
chr19 44821263 44821273 HOXD13 JASPAR yes 70855090
chr19 44821264 44821276 FOXI1 JASPAR yes 70855091
chr19 44821266 44821274 FOXG1 JASPAR yes 70855092
chr19 44821279 44821288 SNAI2 JASPAR yes 70855093
chr19 44821279 44821289 ID4 JASPAR yes 70855094
chr19 44821279 44821289 TCF3 JASPAR yes 70855095
chr19 44821279 44821289 TCF4 JASPAR yes 70855096
chr19 44821296 44821308 FOXC2 JASPAR yes 70855097
chr19 44821297 44821308 FOXC1 JASPAR yes 70855098
chr19 44821298 44821302 YY1 TRANSFAC yes 70855099
chr19 44821324 44821339 SOX21 JASPAR yes 70855100
chr19 44821324 44821340 SOX4 JASPAR yes 70855101
chr19 44821330 44821347 BCL6B JASPAR yes 70855102
chr19 44821347 44821368 IRF1 JASPAR yes 70855103
chr19 44821352 44821367 MEF2A JASPAR yes 70855104
chr19 44821353 44821368 MEF2C JASPAR yes 70855105
chr19 44821353 44821374 IRF1 JASPAR yes 70855106
chr19 44821354 44821366 MEF2A JASPAR yes 70855107
chr19 44821354 44821366 MEF2B JASPAR yes 70855108
chr19 44821354 44821366 MEF2D JASPAR yes 70855109
chr19 44821355 44821365 MEF2A JASPAR yes 70855110
chr19 44821356 44821360 YY1 TRANSFAC yes 70855111
chr19 44821363 44821379 RFX2 JASPAR yes 70855112
chr19 44821363 44821379 RFX3 JASPAR yes 70855113
chr19 44821363 44821379 RFX5 JASPAR yes 70855114
chr19 44821416 44821422 MZF1 JASPAR yes 70855115
SNP sites on vista29552[chr19:44821121-44821451]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29552[chr19:44821121-44821451]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 44732882 44809199 - ZNF235 ENSG00000159917.10 44809199 0.69 0.99 17657 88078
chr19 44754318 44779470 + ZNF233 ENSG00000159915.8 44754318 0.89 0.99 17658 33197
chr19 44830708 44871377 - ZNF112 ENSG00000062370.12 44871377 0.78 0.99 17659 50074
chr19 44833848 44905774 - CTC-512J12.6 ENSG00000267173.1 44905774 1.0 0.97 17660 15677
chr19 44886459 44905774 - ZNF285 ENSG00000267508.1 44905774 0.85 0.88 17661 15677
Expression level of Genes
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miRNAs possibly regulated by vista29552[chr19:44821121-44821451]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results