EnhancerDB
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  3. vista29571[chr19:45279679-45279961]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29571[chr19:45279679-45279961]
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Tissue distribution of vista29571
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Transcription factor that possibly regulate vista29571[chr19:45279679-45279961]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 45279523 45280216 POLR2A UCSC Txn Factor no Conserved 108414885
chr19 45279680 45279695 FOXP1 JASPAR yes 70856349
chr19 45279680 45279701 IRF1 JASPAR yes 70856350
chr19 45279681 45279696 FOXP1 JASPAR yes 70856351
chr19 45279681 45279702 IRF1 JASPAR yes 70856352
chr19 45279682 45279697 FOXP1 JASPAR yes 70856353
chr19 45279682 45279703 IRF1 JASPAR yes 70856354
chr19 45279683 45279698 FOXP1 JASPAR yes 70856355
chr19 45279683 45279704 IRF1 JASPAR yes 70856356
chr19 45279684 45279699 FOXP1 JASPAR yes 70856357
chr19 45279684 45279705 IRF1 JASPAR yes 70856358
chr19 45279685 45279700 FOXP1 JASPAR yes 70856359
chr19 45279685 45279706 IRF1 JASPAR yes 70856360
chr19 45279686 45279701 FOXP1 JASPAR yes 70856361
chr19 45279686 45279707 IRF1 JASPAR yes 70856362
chr19 45279687 45279702 FOXP1 JASPAR yes 70856363
chr19 45279689 45279704 FOXP1 JASPAR yes 70856364
chr19 45279689 45279710 IRF1 JASPAR yes 70856365
chr19 45279693 45279707 SPI1 JASPAR yes 70856366
chr19 45279700 45279717 RARA JASPAR yes 70856367
chr19 45279709 45279716 E2F1 TRANSFAC yes 70856368
chr19 45279728 45279744 ZNF143 JASPAR yes 70856369
chr19 45279764 45279777 TFAP2A JASPAR yes 70856370
chr19 45279770 45279776 YY1 JASPAR yes 70856371
chr19 45279815 45279828 SCRT2 JASPAR yes 70856372
chr19 45279815 45279830 SCRT1 JASPAR yes 70856373
chr19 45279835 45279854 PAX5 JASPAR yes 70856374
chr19 45279838 45279843 SP1 TRANSFAC yes 70856375
chr19 45279867 45279878 E2F4 JASPAR yes 70856376
chr19 45279869 45279879 SP1 JASPAR yes 70856377
chr19 45279870 45279876 SP1 TRANSFAC yes 70856378
chr19 45279870 45279880 SP1 JASPAR yes 70856379
chr19 45279871 45279878 SP1 TRANSFAC yes 70856380
chr19 45279872 45279877 SP1 TRANSFAC yes 70856381
chr19 45279872 45279878 SP1 TRANSFAC yes 70856382
chr19 45279872 45279879 SP1 TRANSFAC yes 70856383
chr19 45279892 45279898 YY1 JASPAR yes 70856384
chr19 45279896 45279907 E2F4 JASPAR yes 70856385
chr19 45279896 45279907 E2F6 JASPAR yes 70856386
chr19 45279897 45279908 E2F1 JASPAR yes 70856387
chr19 45279927 45279932 GATA1 TRANSFAC yes 70856388
chr19 45279933 45279936 MYB TRANSFAC yes 70856389
chr19 45279938 45279948 SREBF2 JASPAR yes 70856390
chr19 45279945 45279950 H4TF1 TRANSFAC yes 70856391
SNP sites on vista29571[chr19:45279679-45279961]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29571[chr19:45279679-45279961]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 45202421 45213986 + CEACAM16 ENSG00000213892.6 45202421 0.86 1.0 17667 22742
chr19 45250962 45263301 + BCL3 ENSG00000069399.8 45250962 0.75 1.0 17668 71283
chr19 45281126 45303891 + CBLC ENSG00000142273.6 45281126 0.77 1.0 17669 98835
chr19 45312328 45324673 + BCAM ENSG00000187244.6 45312328 0.92 1.0 17670 67633
chr19 45349432 45392485 + PVRL2 ENSG00000130202.5 45349432 0.77 1.0 17671 30529
Expression level of Genes
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miRNAs possibly regulated by vista29571[chr19:45279679-45279961]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results