EnhancerDB
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  3. vista29578[chr19:45427550-45427884]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29578[chr19:45427550-45427884]
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Tissue distribution of vista29578
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Transcription factor that possibly regulate vista29578[chr19:45427550-45427884]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 45427467 45427857 EP300 UCSC Txn Factor no Conserved 108415202
chr19 45427495 45427877 NFIC UCSC Txn Factor no Conserved 108415209
chr19 45427514 45427805 FOXA1 UCSC Txn Factor no Conserved 108415230
chr19 45427520 45427835 SP1 UCSC Txn Factor no Conserved 108415236
chr19 45427524 45427821 FOXA2 UCSC Txn Factor no Conserved 108415239
chr19 45427534 45427869 RXRA UCSC Txn Factor no Conserved 108415248
chr19 45427539 45427815 JUND UCSC Txn Factor no Conserved 108415255
chr19 45427562 45427831 HNF4G UCSC Txn Factor no Conserved 108415271
chr19 45427564 45427780 FOSL2 UCSC Txn Factor no Conserved 108415275
chr19 45427547 45427567 ESR1 JASPAR yes 70856647
chr19 45427547 45427567 ESR1 JASPAR yes 113503898
chr19 45427550 45427568 ESR2 JASPAR yes 70856648
chr19 45427550 45427568 ESR2 JASPAR yes 113503899
chr19 45427551 45427568 ESR1 JASPAR yes 70856649
chr19 45427551 45427568 ESR1 JASPAR yes 113503900
chr19 45427552 45427567 ESR2 JASPAR yes 70856650
chr19 45427552 45427567 ESR2 JASPAR yes 113503901
chr19 45427557 45427567 SP1 JASPAR yes 70856651
chr19 45427557 45427567 SP1 JASPAR yes 113503902
chr19 45427558 45427568 SP1 JASPAR yes 70856652
chr19 45427558 45427568 SP1 JASPAR yes 113503903
chr19 45427560 45427566 NFE2 TRANSFAC yes 70856653
chr19 45427560 45427566 NFE2 TRANSFAC yes 113503904
chr19 45427561 45427573 INSM1 JASPAR yes 70856654
chr19 45427561 45427573 INSM1 JASPAR yes 113503905
chr19 45427563 45427583 RREB1 JASPAR yes 70856655
chr19 45427563 45427583 RREB1 JASPAR yes 113503906
chr19 45427573 45427594 ZNF263 JASPAR yes 70856656
chr19 45427573 45427594 ZNF263 JASPAR yes 113503907
chr19 45427584 45427594 SP1 JASPAR yes 70856657
chr19 45427584 45427594 SP1 JASPAR yes 113503908
chr19 45427593 45427605 NHLH1 JASPAR yes 70856658
chr19 45427593 45427605 NHLH1 JASPAR yes 113503909
chr19 45427594 45427604 MSC JASPAR yes 70856659
chr19 45427594 45427604 MYF6 JASPAR yes 70856660
chr19 45427594 45427604 NHLH1 JASPAR yes 70856661
chr19 45427594 45427604 TFAP4 JASPAR yes 70856662
chr19 45427594 45427604 MSC JASPAR yes 113503910
chr19 45427594 45427604 MYF6 JASPAR yes 113503911
chr19 45427594 45427604 NHLH1 JASPAR yes 113503912
chr19 45427594 45427604 TFAP4 JASPAR yes 113503913
chr19 45427594 45427606 TAL1 JASPAR yes 70856663
chr19 45427594 45427606 TAL1 JASPAR yes 113503914
chr19 45427597 45427609 FOXI1 JASPAR yes 70856664
chr19 45427597 45427609 FOXI1 JASPAR yes 113503915
chr19 45427611 45427625 TCF7L2 JASPAR yes 70856665
chr19 45427611 45427625 TCF7L2 JASPAR yes 113503916
chr19 45427650 45427668 SRF JASPAR yes 70856666
chr19 45427650 45427668 SRF JASPAR yes 113503917
chr19 45427653 45427665 SRF JASPAR yes 70856667
chr19 45427653 45427665 SRF JASPAR yes 113503918
chr19 45427661 45427672 FOXA1 JASPAR yes 70856668
chr19 45427661 45427672 FOXA1 JASPAR yes 113503919
chr19 45427661 45427676 FOXA1 JASPAR yes 70856669
chr19 45427661 45427676 FOXA1 JASPAR yes 113503920
chr19 45427663 45427667 LFA1 TRANSFAC yes 70856670
chr19 45427663 45427667 LFA1 TRANSFAC yes 113503921
chr19 45427684 45427695 FOXA1 JASPAR yes 70856671
chr19 45427684 45427695 FOXA1 JASPAR yes 113503922
chr19 45427690 45427696 HiNF-A TRANSFAC yes 70856672
chr19 45427690 45427696 HiNF-A TRANSFAC yes 113503923
chr19 45427703 45427720 RXRA JASPAR yes 70856673
chr19 45427703 45427720 RXRA JASPAR yes 113503924
chr19 45427709 45427730 REST JASPAR yes 70856674
chr19 45427709 45427730 REST JASPAR yes 113503925
chr19 45427710 45427723 NR2F1 JASPAR yes 70856675
chr19 45427710 45427723 NR2F1 JASPAR yes 113503926
chr19 45427710 45427729 REST JASPAR yes 70856676
chr19 45427710 45427729 REST JASPAR yes 113503927
chr19 45427712 45427723 ESRRA JASPAR yes 70856677
chr19 45427712 45427723 ESRRB JASPAR yes 70856678
chr19 45427712 45427723 ESRRA JASPAR yes 113503928
chr19 45427712 45427723 ESRRB JASPAR yes 113503929
chr19 45427713 45427721 NR4A2 JASPAR yes 70856679
chr19 45427713 45427721 NR4A2 JASPAR yes 113503930
chr19 45427714 45427724 RORA JASPAR yes 70856680
chr19 45427714 45427724 RORA JASPAR yes 113503931
chr19 45427725 45427740 HNF4G JASPAR yes 70856681
chr19 45427725 45427740 NR2C2 JASPAR yes 70856682
chr19 45427725 45427740 HNF4G JASPAR yes 113503932
chr19 45427725 45427740 NR2C2 JASPAR yes 113503933
chr19 45427726 45427740 RXRB JASPAR yes 70856683
chr19 45427726 45427740 RXRG JASPAR yes 70856684
chr19 45427726 45427740 RXRB JASPAR yes 113503934
chr19 45427726 45427740 RXRG JASPAR yes 113503935
chr19 45427726 45427741 HNF4A JASPAR yes 70856685
chr19 45427726 45427741 HNF4A JASPAR yes 113503936
chr19 45427728 45427732 LFA1 TRANSFAC yes 70856686
chr19 45427728 45427732 LFA1 TRANSFAC yes 113503937
chr19 45427731 45427744 NR2F1 JASPAR yes 70856687
chr19 45427731 45427744 NR2F1 JASPAR yes 113503938
chr19 45427732 45427747 HNF4G JASPAR yes 70856688
chr19 45427732 45427747 NR2C2 JASPAR yes 70856689
chr19 45427732 45427747 HNF4G JASPAR yes 113503939
chr19 45427732 45427747 NR2C2 JASPAR yes 113503940
chr19 45427733 45427748 HNF4A JASPAR yes 70856690
chr19 45427733 45427748 HNF4A JASPAR yes 113503941
chr19 45427735 45427739 ESR1 TRANSFAC yes 70856691
chr19 45427735 45427739 ESR1 TRANSFAC yes 113503942
chr19 45427771 45427777 ZNF354C JASPAR yes 70856692
chr19 45427771 45427777 ZNF354C JASPAR yes 113503943
chr19 45427801 45427816 NR2C2 JASPAR yes 70856693
chr19 45427801 45427816 NR2C2 JASPAR yes 113503944
chr19 45427844 45427848 H4TF2 TRANSFAC yes 70856694
chr19 45427844 45427848 H4TF2 TRANSFAC yes 113503945
chr19 45427869 45427874 SP1 TRANSFAC yes 70856695
chr19 45427869 45427874 SP1 TRANSFAC yes 113503946
chr19 45427871 45427876 TFAP2A TRANSFAC yes 70856696
chr19 45427871 45427876 TFAP2A TRANSFAC yes 113503947
chr19 45427871 45427877 MZF1 JASPAR yes 70856697
chr19 45427871 45427877 MZF1 JASPAR yes 113503948
chr19 45427884 45427893 NKX3-2 JASPAR yes 70856698
chr19 45427884 45427893 NKX3-2 JASPAR yes 113503949
chr19 45427884 45427902 ESR1 JASPAR yes 70856699
chr19 45427884 45427902 ESR1 JASPAR yes 113503950
SNP sites on vista29578[chr19:45427550-45427884]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29578[chr19:45427550-45427884]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 45349432 45392485 + PVRL2 ENSG00000130202.5 45349432 0.77 1.0 17671 21882
chr19 45393826 45406946 + TOMM40 ENSG00000130204.8 45393826 0.85 0.99 17672 66276
chr19 45409011 45412650 + APOE ENSG00000130203.5 45409011 0.93 0.96 17673 81461
chr19 45417504 45422606 + APOC1 ENSG00000130208.5 45417504 0.99 0.94 17674 89954
chr19 45445495 45452820 + APOC4 ENSG00000267467.2 45445495 1.0 0.93 17676 82389
chr19 45445495 45452822 + APOC4-APOC2 ENSG00000224916.4 45445495 1.0 1.0 17675 82389
chr19 45449243 45452822 + APOC2 ENSG00000234906.4 45449243 1.0 1.0 17677 78641
chr19 45453301 45457264 - CTB-129P6.11 ENSG00000267114.1 45457264 0.77 1.0 17678 70620
chr19 45457842 45496599 + CLPTM1 ENSG00000104853.11 45457842 0.67 1.0 17679 70042
chr19 45504688 45541452 + RELB ENSG00000104856.9 45504688 0.73 1.0 17680 23196
Expression level of Genes
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miRNAs possibly regulated by vista29578[chr19:45427550-45427884]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results