EnhancerDB
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  3. vista29586[chr19:45620495-45620703]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29586[chr19:45620495-45620703]
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Tissue distribution of vista29586
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Transcription factor that possibly regulate vista29586[chr19:45620495-45620703]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 45620435 45620806 RUNX3 UCSC Txn Factor no Conserved 108415810
chr19 45620481 45620797 EBF1 UCSC Txn Factor no Conserved 108415813
chr19 45620518 45620724 EGR1 UCSC Txn Factor no Conserved 108415817
chr19 45620504 45620516 NHLH1 JASPAR yes 70856984
chr19 45620504 45620516 NHLH1 JASPAR yes 113511766
chr19 45620505 45620515 NHLH1 JASPAR yes 70856985
chr19 45620505 45620515 NHLH1 JASPAR yes 113511767
chr19 45620518 45620539 ZNF263 JASPAR yes 70856986
chr19 45620518 45620539 ZNF263 JASPAR yes 113511768
chr19 45620519 45620534 ZIC3 JASPAR yes 70856987
chr19 45620519 45620534 ZIC3 JASPAR yes 113511769
chr19 45620531 45620537 MAZ TRANSFAC yes 70856988
chr19 45620531 45620537 MAZ TRANSFAC yes 113511770
chr19 45620531 45620542 E2F6 JASPAR yes 70856989
chr19 45620531 45620542 E2F6 JASPAR yes 113511771
chr19 45620535 45620540 ETS2 TRANSFAC yes 70856990
chr19 45620535 45620540 ETS2 TRANSFAC yes 113511772
chr19 45620541 45620545 NFE TRANSFAC yes 70856991
chr19 45620541 45620545 NFE TRANSFAC yes 113511773
chr19 45620547 45620555 SP1 TRANSFAC yes 70856992
chr19 45620547 45620555 SP1 TRANSFAC yes 113511774
chr19 45620549 45620555 MAZ TRANSFAC yes 70856993
chr19 45620549 45620555 MAZ TRANSFAC yes 113511775
chr19 45620549 45620560 E2F6 JASPAR yes 70856994
chr19 45620549 45620560 E2F6 JASPAR yes 113511776
chr19 45620553 45620558 ETS2 TRANSFAC yes 70856995
chr19 45620553 45620558 ETS2 TRANSFAC yes 113511777
chr19 45620561 45620566 MYC TRANSFAC yes 70856996
chr19 45620561 45620566 MYC TRANSFAC yes 113511778
chr19 45620575 45620586 E2F1 JASPAR yes 70856997
chr19 45620575 45620586 E2F1 JASPAR yes 113511779
chr19 45620576 45620581 SP1 TRANSFAC yes 70856998
chr19 45620576 45620581 SP1 TRANSFAC yes 113511780
chr19 45620576 45620587 E2F4 JASPAR yes 70856999
chr19 45620576 45620587 E2F6 JASPAR yes 70857000
chr19 45620576 45620587 E2F4 JASPAR yes 113511781
chr19 45620576 45620587 E2F6 JASPAR yes 113511782
chr19 45620577 45620582 SP1 TRANSFAC yes 70857001
chr19 45620577 45620582 SP1 TRANSFAC yes 113511783
chr19 45620585 45620600 RUNX2 JASPAR yes 70857002
chr19 45620585 45620600 RUNX2 JASPAR yes 113511784
chr19 45620586 45620595 RUNX2 JASPAR yes 70857003
chr19 45620586 45620595 RUNX2 JASPAR yes 113511785
chr19 45620586 45620596 RUNX3 JASPAR yes 70857004
chr19 45620586 45620596 RUNX3 JASPAR yes 113511786
chr19 45620586 45620597 RUNX1 JASPAR yes 70857005
chr19 45620586 45620597 RUNX1 JASPAR yes 113511787
chr19 45620591 45620597 SOX10 JASPAR yes 70857006
chr19 45620591 45620597 SOX10 JASPAR yes 113511788
chr19 45620631 45620644 NFKB2 JASPAR yes 70857007
chr19 45620631 45620644 NFKB2 JASPAR yes 113511789
chr19 45620662 45620667 SP1 TRANSFAC yes 70857008
chr19 45620662 45620667 SP1 TRANSFAC yes 113511790
chr19 45620686 45620707 IRF1 JASPAR yes 70857009
chr19 45620686 45620707 IRF1 JASPAR yes 113511791
chr19 45620702 45620719 RXRA JASPAR yes 70857010
chr19 45620702 45620719 RXRA JASPAR yes 113511792
SNP sites on vista29586[chr19:45620495-45620703]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29586[chr19:45620495-45620703]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 45542298 45574214 + CLASRP ENSG00000104859.10 45542298 0.6 1.0 17681 21803
chr19 45574758 45579846 - ZNF296 ENSG00000170684.4 45579846 0.9 1.0 17682 59351
chr19 45582453 45594782 + GEMIN7 ENSG00000142252.6 45582453 0.83 0.99 17683 61958
chr19 45582546 45808541 + MARK4 ENSG00000007047.10 45582546 0.63 1.0 17684 62051
chr19 45594654 45651335 + PPP1R37 ENSG00000104866.6 45594654 0.66 1.0 17685 74159
chr19 45653008 45663408 - NKPD1 ENSG00000179846.7 45663408 0.8 1.0 17686 57295
chr19 45666186 45681495 - TRAPPC6A ENSG00000007255.6 45681495 0.67 1.0 17687 39208
chr19 45682003 45685059 + BLOC1S3 ENSG00000189114.6 45682003 0.69 0.99 17688 38700
chr19 45683080 45705702 + AC005779.2 ENSG00000267545.1 45683080 0.84 0.9 17689 37623
chr19 45690646 45720191 + AC006126.3 ENSG00000266958.1 45690646 0.87 1.0 17690 30057
Expression level of Genes
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miRNAs possibly regulated by vista29586[chr19:45620495-45620703]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results