EnhancerDB
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  3. vista29601[chr19:45953262-45953678]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29601[chr19:45953262-45953678]
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Tissue distribution of vista29601
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Transcription factor that possibly regulate vista29601[chr19:45953262-45953678]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 45953241 45955422 POLR2A UCSC Txn Factor no Conserved 108416549
chr19 45953241 45955422 POLR2A UCSC Txn Factor no Conserved 108416550
chr19 45953241 45955422 POLR2A UCSC Txn Factor no Conserved 108416551
chr19 45953367 45953843 MAX UCSC Txn Factor no Conserved 108416563
chr19 45953367 45953843 MAX UCSC Txn Factor no Conserved 108416564
chr19 45953263 45953278 HNF1A JASPAR yes 70857922
chr19 45953263 45953278 HNF1A JASPAR yes 113526569
chr19 45953264 45953277 HNF1B JASPAR yes 70857923
chr19 45953264 45953277 HNF1B JASPAR yes 113526570
chr19 45953265 45953276 PHOX2A JASPAR yes 70857924
chr19 45953265 45953276 PHOX2A JASPAR yes 113526571
chr19 45953266 45953278 TEF JASPAR yes 70857925
chr19 45953266 45953278 TEF JASPAR yes 113526572
chr19 45953269 45953281 POU3F1 JASPAR yes 70857926
chr19 45953269 45953281 POU3F2 JASPAR yes 70857927
chr19 45953269 45953281 POU3F1 JASPAR yes 113526573
chr19 45953269 45953281 POU3F2 JASPAR yes 113526574
chr19 45953269 45953282 POU3F3 JASPAR yes 70857928
chr19 45953269 45953282 POU3F3 JASPAR yes 113526575
chr19 45953273 45953276 MYB TRANSFAC yes 70857929
chr19 45953273 45953276 MYB TRANSFAC yes 113526576
chr19 45953273 45953284 PHOX2A JASPAR yes 70857930
chr19 45953273 45953284 PROP1 JASPAR yes 70857931
chr19 45953273 45953284 PHOX2A JASPAR yes 113526577
chr19 45953273 45953284 PROP1 JASPAR yes 113526578
chr19 45953276 45953286 GSX1 JASPAR yes 70857932
chr19 45953276 45953286 GSX2 JASPAR yes 70857933
chr19 45953276 45953286 GSX1 JASPAR yes 113526579
chr19 45953276 45953286 GSX2 JASPAR yes 113526580
chr19 45953277 45953285 LMX1A JASPAR yes 70857934
chr19 45953277 45953285 LMX1B JASPAR yes 70857935
chr19 45953277 45953285 NKX6-1 JASPAR yes 70857936
chr19 45953277 45953285 NKX6-2 JASPAR yes 70857937
chr19 45953277 45953285 VAX1 JASPAR yes 70857938
chr19 45953277 45953285 VAX2 JASPAR yes 70857939
chr19 45953277 45953285 VSX1 JASPAR yes 70857940
chr19 45953277 45953285 VSX2 JASPAR yes 70857941
chr19 45953277 45953285 LMX1A JASPAR yes 113526581
chr19 45953277 45953285 LMX1B JASPAR yes 113526582
chr19 45953277 45953285 NKX6-1 JASPAR yes 113526583
chr19 45953277 45953285 NKX6-2 JASPAR yes 113526584
chr19 45953277 45953285 VAX1 JASPAR yes 113526585
chr19 45953277 45953285 VAX2 JASPAR yes 113526586
chr19 45953277 45953285 VSX1 JASPAR yes 113526587
chr19 45953277 45953285 VSX2 JASPAR yes 113526588
chr19 45953288 45953292 YY1 TRANSFAC yes 70857942
chr19 45953288 45953292 YY1 TRANSFAC yes 113526589
chr19 45953300 45953309 NKX3-2 JASPAR yes 70857943
chr19 45953300 45953309 NKX3-2 JASPAR yes 113526590
chr19 45953315 45953323 ISL2 JASPAR yes 70857944
chr19 45953315 45953323 ISL2 JASPAR yes 113526591
chr19 45953315 45953324 NKX3-2 JASPAR yes 70857945
chr19 45953315 45953324 NKX3-2 JASPAR yes 113526592
chr19 45953320 45953337 BCL6B JASPAR yes 70857946
chr19 45953320 45953337 BCL6B JASPAR yes 113526593
chr19 45953338 45953342 ESR1 TRANSFAC yes 70857947
chr19 45953338 45953342 ESR1 TRANSFAC yes 113526594
chr19 45953353 45953358 SP1 TRANSFAC yes 70857948
chr19 45953353 45953358 SP1 TRANSFAC yes 113526595
chr19 45953358 45953372 GATA2 JASPAR yes 70857949
chr19 45953358 45953372 GATA2 JASPAR yes 113526596
chr19 45953374 45953378 YY1 TRANSFAC yes 70857950
chr19 45953374 45953378 YY1 TRANSFAC yes 113526597
chr19 45953375 45953386 STAT3 JASPAR yes 70857951
chr19 45953375 45953386 STAT3 JASPAR yes 113526598
chr19 45953379 45953387 EHF JASPAR yes 70857952
chr19 45953379 45953387 EHF JASPAR yes 113526599
chr19 45953382 45953403 ZNF263 JASPAR yes 70857953
chr19 45953382 45953403 ZNF263 JASPAR yes 113526600
chr19 45953383 45953388 ETS2 TRANSFAC yes 70857954
chr19 45953383 45953388 ETS2 TRANSFAC yes 113526601
chr19 45953383 45953391 EHF JASPAR yes 70857955
chr19 45953383 45953391 EHF JASPAR yes 113526602
chr19 45953397 45953404 SPIB JASPAR yes 70857956
chr19 45953397 45953404 SPIB JASPAR yes 113526603
chr19 45953397 45953408 FLI1 JASPAR yes 70857957
chr19 45953397 45953408 FLI1 JASPAR yes 113526604
chr19 45953398 45953406 EHF JASPAR yes 70857958
chr19 45953398 45953406 EHF JASPAR yes 113526605
chr19 45953399 45953406 SPI1 JASPAR yes 70857959
chr19 45953399 45953406 SPI1 JASPAR yes 113526606
chr19 45953401 45953415 RXRB JASPAR yes 70857960
chr19 45953401 45953415 RXRG JASPAR yes 70857961
chr19 45953401 45953415 RXRB JASPAR yes 113526607
chr19 45953401 45953415 RXRG JASPAR yes 113526608
chr19 45953407 45953422 HNF4G JASPAR yes 70857962
chr19 45953407 45953422 HNF4G JASPAR yes 113526609
chr19 45953408 45953422 NR2F1 JASPAR yes 70857963
chr19 45953408 45953422 RXRB JASPAR yes 70857964
chr19 45953408 45953422 RXRG JASPAR yes 70857965
chr19 45953408 45953422 NR2F1 JASPAR yes 113526610
chr19 45953408 45953422 RXRB JASPAR yes 113526611
chr19 45953408 45953422 RXRG JASPAR yes 113526612
chr19 45953408 45953423 HNF4A JASPAR yes 70857966
chr19 45953408 45953423 HNF4A JASPAR yes 113526613
chr19 45953410 45953414 ESR1 TRANSFAC yes 70857967
chr19 45953410 45953414 ESR1 TRANSFAC yes 113526614
chr19 45953428 45953438 HMBOX1 JASPAR yes 70857968
chr19 45953428 45953438 HMBOX1 JASPAR yes 113526615
chr19 45953430 45953433 MYB TRANSFAC yes 70857969
chr19 45953430 45953433 MYB TRANSFAC yes 113526616
chr19 45953436 45953452 SOX4 JASPAR yes 70857970
chr19 45953436 45953452 SOX4 JASPAR yes 113526617
chr19 45953436 45953456 TP63 JASPAR yes 70857971
chr19 45953436 45953456 TP63 JASPAR yes 113526618
chr19 45953457 45953462 GATA1 TRANSFAC yes 70857972
chr19 45953457 45953462 GATA1 TRANSFAC yes 113526619
chr19 45953463 45953467 NFE TRANSFAC yes 70857973
chr19 45953463 45953467 NFE TRANSFAC yes 113526620
chr19 45953486 45953506 TP53 JASPAR yes 70857974
chr19 45953486 45953506 TP53 JASPAR yes 113526621
chr19 45953487 45953491 H4TF2 TRANSFAC yes 70857975
chr19 45953487 45953491 H4TF2 TRANSFAC yes 113526622
chr19 45953492 45953512 TP53 JASPAR yes 70857976
chr19 45953492 45953512 TP53 JASPAR yes 113526623
chr19 45953507 45953517 BHLHE40 JASPAR yes 70857977
chr19 45953507 45953517 CLOCK JASPAR yes 70857978
chr19 45953507 45953517 HEY1 JASPAR yes 70857979
chr19 45953507 45953517 MAX JASPAR yes 70857980
chr19 45953507 45953517 MNT JASPAR yes 70857981
chr19 45953507 45953517 BHLHE40 JASPAR yes 113526624
chr19 45953507 45953517 CLOCK JASPAR yes 113526625
chr19 45953507 45953517 HEY1 JASPAR yes 113526626
chr19 45953507 45953517 MAX JASPAR yes 113526627
chr19 45953507 45953517 MNT JASPAR yes 113526628
chr19 45953509 45953514 MYC TRANSFAC yes 70857982
chr19 45953509 45953514 USF1 TRANSFAC yes 70857983
chr19 45953509 45953514 USF2 TRANSFAC yes 70857984
chr19 45953509 45953514 MYC TRANSFAC yes 113526629
chr19 45953509 45953514 USF1 TRANSFAC yes 113526630
chr19 45953509 45953514 USF2 TRANSFAC yes 113526631
chr19 45953512 45953526 ONECUT1 JASPAR yes 70857985
chr19 45953512 45953526 ONECUT2 JASPAR yes 70857986
chr19 45953512 45953526 ONECUT3 JASPAR yes 70857987
chr19 45953512 45953526 ONECUT1 JASPAR yes 113526632
chr19 45953512 45953526 ONECUT2 JASPAR yes 113526633
chr19 45953512 45953526 ONECUT3 JASPAR yes 113526634
chr19 45953515 45953525 CUX1 JASPAR yes 70857988
chr19 45953515 45953525 CUX1 JASPAR yes 113526635
chr19 45953516 45953530 POU4F1 JASPAR yes 70857989
chr19 45953516 45953530 POU4F1 JASPAR yes 113526636
chr19 45953530 45953533 MYB TRANSFAC yes 70857990
chr19 45953530 45953533 MYB TRANSFAC yes 113526637
chr19 45953564 45953575 E2F4 JASPAR yes 70857991
chr19 45953564 45953575 E2F6 JASPAR yes 70857992
chr19 45953564 45953575 E2F4 JASPAR yes 113526638
chr19 45953564 45953575 E2F6 JASPAR yes 113526639
chr19 45953564 45953578 E2F7 JASPAR yes 70857993
chr19 45953564 45953578 E2F7 JASPAR yes 113526640
chr19 45953565 45953576 E2F1 JASPAR yes 70857994
chr19 45953565 45953576 E2F1 JASPAR yes 113526641
chr19 45953602 45953605 MYB TRANSFAC yes 70857995
chr19 45953602 45953605 MYB TRANSFAC yes 113526642
chr19 45953604 45953614 SP1 JASPAR yes 70857996
chr19 45953604 45953614 SP1 JASPAR yes 113526643
chr19 45953605 45953615 SP1 JASPAR yes 70857997
chr19 45953605 45953615 SP1 JASPAR yes 113526644
chr19 45953613 45953617 H1TF2 TRANSFAC yes 70857998
chr19 45953613 45953617 NFE TRANSFAC yes 70857999
chr19 45953613 45953617 SRF TRANSFAC yes 70858000
chr19 45953613 45953617 H1TF2 TRANSFAC yes 113526645
chr19 45953613 45953617 NFE TRANSFAC yes 113526646
chr19 45953613 45953617 SRF TRANSFAC yes 113526647
chr19 45953639 45953644 ETS2 TRANSFAC yes 70858001
chr19 45953639 45953644 ETS2 TRANSFAC yes 113526648
chr19 45953642 45953647 ETS2 TRANSFAC yes 70858002
chr19 45953642 45953647 ETS2 TRANSFAC yes 113526649
chr19 45953655 45953666 E2F6 JASPAR yes 70858003
chr19 45953655 45953666 E2F6 JASPAR yes 113526650
chr19 45953659 45953673 PLAG1 JASPAR yes 70858004
chr19 45953659 45953673 PLAG1 JASPAR yes 113526651
chr19 45953663 45953677 PAX6 JASPAR yes 70858005
chr19 45953663 45953677 PAX6 JASPAR yes 113526652
chr19 45953664 45953667 MYB TRANSFAC yes 70858006
chr19 45953664 45953667 MYB TRANSFAC yes 113526653
SNP sites on vista29601[chr19:45953262-45953678]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29601[chr19:45953262-45953678]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 45853095 45874176 - ERCC2 ENSG00000104884.10 45874176 0.68 1.0 17695 20914
chr19 45882892 45909607 - PPP1R13L ENSG00000104881.10 45909607 0.81 1.0 17696 56345
chr19 45909467 45914024 + CD3EAP ENSG00000117877.6 45909467 0.86 0.99 17697 56205
chr19 45910591 45982086 - ERCC1 ENSG00000012061.11 45982086 0.81 1.0 17698 71592
chr19 45971253 45978437 + FOSB ENSG00000125740.9 45971253 0.95 1.0 17699 82425
chr19 45988547 46000319 - RTN2 ENSG00000125744.7 46000319 0.62 1.0 17700 53359
chr19 45992035 46005768 + PPM1N ENSG00000213889.6 45992035 0.87 1.0 17701 61643
chr19 46009837 46030241 + VASP ENSG00000125753.9 46009837 0.74 1.0 17702 43841
Expression level of Genes
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miRNAs possibly regulated by vista29601[chr19:45953262-45953678]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results