EnhancerDB
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  3. vista29620[chr19:46398825-46399093]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29620[chr19:46398825-46399093]
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Tissue distribution of vista29620
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Transcription factor that possibly regulate vista29620[chr19:46398825-46399093]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 46398816 46398829 SMAD2 JASPAR yes 70859186
chr19 46398816 46398829 SMAD2 JASPAR yes 113546002
chr19 46398824 46398834 SP1 JASPAR yes 70859187
chr19 46398824 46398834 SP1 JASPAR yes 113546004
chr19 46398831 46398845 BATF3 JASPAR yes 70859188
chr19 46398831 46398845 BATF3 JASPAR yes 113546005
chr19 46398832 46398844 JDP2 JASPAR yes 70859189
chr19 46398832 46398844 JDP2 JASPAR yes 113546006
chr19 46398858 46398864 LEF1 TRANSFAC yes 70859190
chr19 46398858 46398864 SOX10 JASPAR yes 70859191
chr19 46398858 46398864 LEF1 TRANSFAC yes 113546007
chr19 46398858 46398864 SOX10 JASPAR yes 113546008
chr19 46398863 46398882 CTCF JASPAR yes 70859192
chr19 46398863 46398882 CTCF JASPAR yes 113546009
chr19 46398873 46398888 FOXP1 JASPAR yes 70859193
chr19 46398873 46398888 FOXP1 JASPAR yes 113546010
chr19 46398874 46398885 FOXP2 JASPAR yes 70859194
chr19 46398874 46398885 FOXP2 JASPAR yes 113546011
chr19 46398874 46398888 FOXF2 JASPAR yes 70859195
chr19 46398874 46398888 FOXF2 JASPAR yes 113546012
chr19 46398875 46398883 FOXD1 JASPAR yes 70859196
chr19 46398875 46398883 FOXO3 JASPAR yes 70859197
chr19 46398875 46398883 FOXD1 JASPAR yes 113546013
chr19 46398875 46398883 FOXO3 JASPAR yes 113546014
chr19 46398876 46398883 FOXD2 JASPAR yes 70859198
chr19 46398876 46398883 FOXI1 JASPAR yes 70859199
chr19 46398876 46398883 FOXL1 JASPAR yes 70859200
chr19 46398876 46398883 FOXO4 JASPAR yes 70859201
chr19 46398876 46398883 FOXO6 JASPAR yes 70859202
chr19 46398876 46398883 FOXP3 JASPAR yes 70859203
chr19 46398876 46398883 FOXD2 JASPAR yes 113546015
chr19 46398876 46398883 FOXI1 JASPAR yes 113546016
chr19 46398876 46398883 FOXL1 JASPAR yes 113546017
chr19 46398876 46398883 FOXO4 JASPAR yes 113546018
chr19 46398876 46398883 FOXO6 JASPAR yes 113546019
chr19 46398876 46398883 FOXP3 JASPAR yes 113546020
chr19 46398876 46398884 FOXO3 JASPAR yes 70859204
chr19 46398876 46398884 FOXO3 JASPAR yes 113546021
chr19 46398911 46398915 YY1 TRANSFAC yes 70859205
chr19 46398911 46398915 YY1 TRANSFAC yes 113546022
chr19 46398919 46398930 HOXC11 JASPAR yes 70859206
chr19 46398919 46398930 HOXC13 JASPAR yes 70859207
chr19 46398919 46398930 HOXC11 JASPAR yes 113546023
chr19 46398919 46398930 HOXC13 JASPAR yes 113546024
chr19 46398922 46398925 MYB TRANSFAC yes 70859208
chr19 46398922 46398925 MYB TRANSFAC yes 113546025
chr19 46398953 46398971 NFYA JASPAR yes 70859209
chr19 46398953 46398971 NFYA JASPAR yes 113546026
chr19 46398956 46398972 NFYA JASPAR yes 70859210
chr19 46398956 46398972 NFYA JASPAR yes 113546027
chr19 46398958 46398968 EN2 JASPAR yes 70859211
chr19 46398958 46398968 EN2 JASPAR yes 113546028
chr19 46398959 46398972 DUXA JASPAR yes 70859212
chr19 46398959 46398972 DUXA JASPAR yes 113546029
chr19 46398959 46398974 NFYB JASPAR yes 70859213
chr19 46398959 46398974 NFYB JASPAR yes 113546030
chr19 46398961 46398966 NFY TRANSFAC yes 70859214
chr19 46398961 46398966 NFY TRANSFAC yes 113546031
chr19 46398966 46398970 H4TF2 TRANSFAC yes 70859215
chr19 46398966 46398970 H4TF2 TRANSFAC yes 113546032
chr19 46398982 46398991 HIC2 JASPAR yes 70859216
chr19 46398982 46398991 HIC2 JASPAR yes 113546033
chr19 46398995 46399010 HNF4G JASPAR yes 70859217
chr19 46398995 46399010 HNF4G JASPAR yes 113546034
chr19 46399028 46399033 SP1 TRANSFAC yes 70859218
chr19 46399028 46399033 SP1 TRANSFAC yes 113546035
chr19 46399057 46399061 NFE TRANSFAC yes 70859219
chr19 46399057 46399061 NFE TRANSFAC yes 113546036
chr19 46399081 46399101 ESR1 JASPAR yes 70859220
chr19 46399081 46399101 ESR1 JASPAR yes 113546037
chr19 46399082 46399102 ESR1 JASPAR yes 70859221
chr19 46399082 46399102 ESR1 JASPAR yes 113546038
SNP sites on vista29620[chr19:46398825-46399093]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29620[chr19:46398825-46399093]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 46298968 46318577 - RSPH6A ENSG00000104941.3 46318577 0.99 0.85 17716 19752
chr19 46318668 46366548 - SYMPK ENSG00000125755.14 46366548 0.59 1.0 17717 67723
chr19 46367247 46377055 + FOXA3 ENSG00000170608.2 46367247 0.92 1.0 17718 68422
chr19 46386866 46389376 - IRF2BP1 ENSG00000170604.3 46389376 0.67 1.0 17719 90551
chr19 46393278 46405862 - MYPOP ENSG00000176182.5 46405862 0.66 0.99 17720 93231
chr19 46416475 46418036 - NANOS2 ENSG00000188425.2 46418036 0.97 0.0 17721 81057
chr19 46436992 46476804 - NOVA2 ENSG00000104967.6 46476804 0.86 1.0 17722 22289
chr19 46498339 46524576 + CCDC61 ENSG00000104983.4 46498339 0.62 1.0 17723 754
Expression level of Genes
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miRNAs possibly regulated by vista29620[chr19:46398825-46399093]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results