EnhancerDB
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  3. vista29623[chr19:46504246-46504437]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29623[chr19:46504246-46504437]
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Tissue distribution of vista29623
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Transcription factor that possibly regulate vista29623[chr19:46504246-46504437]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 46504239 46504253 GLIS2 JASPAR yes 70859309
chr19 46504239 46504253 GLIS2 JASPAR yes 113548533
chr19 46504247 46504254 SP1 TRANSFAC yes 70859310
chr19 46504247 46504254 SP1 TRANSFAC yes 113548534
chr19 46504248 46504258 SP1 JASPAR yes 70859311
chr19 46504248 46504258 SP1 JASPAR yes 113548535
chr19 46504249 46504254 SP1 TRANSFAC yes 70859312
chr19 46504249 46504254 SP1 TRANSFAC yes 113548536
chr19 46504302 46504317 RFX5 JASPAR yes 70859313
chr19 46504302 46504317 RFX5 JASPAR yes 113548537
chr19 46504310 46504313 MYB TRANSFAC yes 70859314
chr19 46504310 46504313 MYB TRANSFAC yes 113548538
chr19 46504327 46504343 NFYA JASPAR yes 70859315
chr19 46504327 46504343 NFYA JASPAR yes 113548539
chr19 46504343 46504364 ZNF263 JASPAR yes 70859316
chr19 46504343 46504364 ZNF263 JASPAR yes 113548540
chr19 46504344 46504359 ZIC3 JASPAR yes 70859317
chr19 46504344 46504359 ZIC3 JASPAR yes 113548541
chr19 46504345 46504356 TFAP2A JASPAR yes 70859318
chr19 46504345 46504356 TFAP2A JASPAR yes 113548542
chr19 46504350 46504360 ZNF740 JASPAR yes 70859319
chr19 46504350 46504360 ZNF740 JASPAR yes 113548543
chr19 46504352 46504362 SP1 JASPAR yes 70859320
chr19 46504352 46504362 SP1 JASPAR yes 113548544
chr19 46504353 46504363 SP1 JASPAR yes 70859321
chr19 46504353 46504363 SP1 JASPAR yes 113548545
chr19 46504353 46504373 RREB1 JASPAR yes 70859322
chr19 46504353 46504373 RREB1 JASPAR yes 113548546
chr19 46504355 46504360 SP1 TRANSFAC yes 70859323
chr19 46504355 46504360 SP1 TRANSFAC yes 113548547
chr19 46504356 46504376 RREB1 JASPAR yes 70859324
chr19 46504356 46504376 RREB1 JASPAR yes 113548548
chr19 46504365 46504375 SP1 JASPAR yes 70859325
chr19 46504365 46504375 SP1 JASPAR yes 113548549
chr19 46504366 46504376 SP1 JASPAR yes 70859326
chr19 46504366 46504376 SP1 JASPAR yes 113548550
chr19 46504367 46504372 SP1 TRANSFAC yes 70859327
chr19 46504367 46504372 SP1 TRANSFAC yes 113548551
chr19 46504368 46504373 SP1 TRANSFAC yes 70859328
chr19 46504368 46504373 SP1 TRANSFAC yes 113548552
chr19 46504368 46504374 SP1 TRANSFAC yes 70859329
chr19 46504368 46504374 SP1 TRANSFAC yes 113548553
chr19 46504381 46504400 PAX5 JASPAR yes 70859330
chr19 46504381 46504400 PAX5 JASPAR yes 113548554
chr19 46504389 46504399 SP1 JASPAR yes 70859331
chr19 46504389 46504399 SP1 JASPAR yes 113548555
chr19 46504390 46504398 SP1 TRANSFAC yes 70859332
chr19 46504390 46504398 SP1 TRANSFAC yes 113548556
chr19 46504390 46504399 SP1 TRANSFAC yes 70859333
chr19 46504390 46504399 SP1 TRANSFAC yes 113548557
chr19 46504391 46504396 SP1 TRANSFAC yes 70859334
chr19 46504391 46504396 SP1 TRANSFAC yes 113548558
chr19 46504392 46504397 SP1 TRANSFAC yes 70859335
chr19 46504392 46504397 SP1 TRANSFAC yes 113548559
chr19 46504392 46504398 SP1 TRANSFAC yes 70859336
chr19 46504392 46504398 SP1 TRANSFAC yes 113548560
chr19 46504395 46504400 SP1 TRANSFAC yes 70859337
chr19 46504395 46504400 SP1 TRANSFAC yes 113548561
chr19 46504420 46504433 NR2F1 JASPAR yes 70859338
chr19 46504420 46504433 NR2F1 JASPAR yes 113548562
chr19 46504424 46504428 ESR1 TRANSFAC yes 70859339
chr19 46504424 46504428 ESR1 TRANSFAC yes 113548563
SNP sites on vista29623[chr19:46504246-46504437]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29623[chr19:46504246-46504437]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 46393278 46405862 - MYPOP ENSG00000176182.5 46405862 0.66 0.99 17720 1616
chr19 46416475 46418036 - NANOS2 ENSG00000188425.2 46418036 0.97 0.0 17721 13790
chr19 46436992 46476804 - NOVA2 ENSG00000104967.6 46476804 0.86 1.0 17722 72558
chr19 46498339 46524576 + CCDC61 ENSG00000104983.4 46498339 0.62 1.0 17723 94093
chr19 46522411 46526323 - PGLYRP1 ENSG00000008438.4 46526323 0.98 0.99 17724 78114
chr19 46543006 46580376 - IGFL4 ENSG00000204869.4 46580376 0.9 0.98 17725 24061
Expression level of Genes
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miRNAs possibly regulated by vista29623[chr19:46504246-46504437]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results