EnhancerDB
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  3. vista29636[chr19:46905606-46905628]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29636[chr19:46905606-46905628]
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Tissue distribution of vista29636
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Transcription factor that possibly regulate vista29636[chr19:46905606-46905628]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 46905481 46905815 CTCF UCSC Txn Factor no Conserved 108417544
chr19 46905508 46905801 SMC3 UCSC Txn Factor no Conserved 108417549
chr19 46905519 46905830 RAD21 UCSC Txn Factor no Conserved 108417552
SNP sites on vista29636[chr19:46905606-46905628]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29636[chr19:46905606-46905628]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 46850251 46896238 + PPP5C ENSG00000011485.10 46850251 0.64 1.0 17730 44645
chr19 46913629 46916841 - CCDC8 ENSG00000169515.5 46916841 0.82 0.98 17731 88787
chr19 46969748 46974820 - PNMAL1 ENSG00000182013.13 46974820 0.82 0.95 17732 30808
chr19 46990163 46999755 - PNMAL2 ENSG00000204851.5 46999755 0.89 0.95 17734 5873
chr19 46997765 46999755 + AC011484.1 ENSG00000204850.3 46997765 0.91 1.0 17735 7863
Expression level of Genes
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miRNAs possibly regulated by vista29636[chr19:46905606-46905628]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results