EnhancerDB
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  3. vista29645[chr19:47033456-47033629]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29645[chr19:47033456-47033629]
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Tissue distribution of vista29645
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Transcription factor that possibly regulate vista29645[chr19:47033456-47033629]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 47033439 47033456 BCL6B JASPAR yes 70860348
chr19 47033439 47033456 BCL6B JASPAR yes 113583511
chr19 47033457 47033478 ZNF263 JASPAR yes 70860349
chr19 47033457 47033478 ZNF263 JASPAR yes 113583512
chr19 47033461 47033476 PRDM1 JASPAR yes 70860350
chr19 47033461 47033476 PRDM1 JASPAR yes 113583513
chr19 47033463 47033484 ZNF263 JASPAR yes 70860351
chr19 47033463 47033484 ZNF263 JASPAR yes 113583514
chr19 47033472 47033492 RREB1 JASPAR yes 70860352
chr19 47033472 47033492 RREB1 JASPAR yes 113583515
chr19 47033474 47033484 SP1 JASPAR yes 70860353
chr19 47033474 47033484 SP1 JASPAR yes 113583516
chr19 47033477 47033491 GLIS3 JASPAR yes 70860354
chr19 47033477 47033491 GLIS3 JASPAR yes 113583517
chr19 47033481 47033493 SRF JASPAR yes 70860355
chr19 47033481 47033493 SRF JASPAR yes 113583518
chr19 47033491 47033495 ESR1 TRANSFAC yes 70860356
chr19 47033491 47033495 ESR1 TRANSFAC yes 113583519
chr19 47033506 47033523 RXRA JASPAR yes 70860357
chr19 47033506 47033523 RXRA JASPAR yes 113583520
chr19 47033508 47033523 ESR2 JASPAR yes 70860358
chr19 47033508 47033523 ESR2 JASPAR yes 113583521
chr19 47033511 47033522 ESRRA JASPAR yes 70860359
chr19 47033511 47033522 ESRRA JASPAR yes 113583522
chr19 47033527 47033533 JUN TRANSFAC yes 70860360
chr19 47033527 47033533 JUN TRANSFAC yes 113583523
chr19 47033536 47033540 NFE TRANSFAC yes 70860361
chr19 47033536 47033540 NFE TRANSFAC yes 113583524
chr19 47033562 47033583 ZNF263 JASPAR yes 70860362
chr19 47033562 47033583 ZNF263 JASPAR yes 113583525
chr19 47033564 47033570 ETS1 JASPAR yes 70860363
chr19 47033564 47033570 SPI1 JASPAR yes 70860364
chr19 47033564 47033570 ETS1 JASPAR yes 113583526
chr19 47033564 47033570 SPI1 JASPAR yes 113583527
chr19 47033602 47033617 ZIC3 JASPAR yes 70860365
chr19 47033602 47033617 ZIC3 JASPAR yes 113583528
chr19 47033610 47033620 SP1 JASPAR yes 70860366
chr19 47033610 47033620 SP1 JASPAR yes 113583529
chr19 47033622 47033633 BATF JASPAR yes 70860367
chr19 47033622 47033633 BATF JASPAR yes 113583530
SNP sites on vista29645[chr19:47033456-47033629]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29645[chr19:47033456-47033629]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 46969748 46974820 - PNMAL1 ENSG00000182013.13 46974820 0.82 0.95 17732 41364
chr19 46984053 47104457 - PPP5D1 ENSG00000230510.2 47104457 0.81 0.99 17733 29172
chr19 46990163 46999755 - PNMAL2 ENSG00000204851.5 46999755 0.89 0.95 17734 66299
chr19 46997765 46999755 + AC011484.1 ENSG00000204850.3 46997765 0.91 1.0 17735 64309
chr19 47050313 47104118 - AC011551.3 ENSG00000268423.1 47104118 0.78 0.87 17736 29511
chr19 47104331 47114050 + CALM3 ENSG00000160014.12 47104331 0.68 1.0 17737 29298
chr19 47123725 47128375 - PTGIR ENSG00000160013.4 47128375 0.9 0.96 17738 5254
Expression level of Genes
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miRNAs possibly regulated by vista29645[chr19:47033456-47033629]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results