EnhancerDB
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  3. vista29648[chr19:47121981-47122214]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29648[chr19:47121981-47122214]
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Tissue distribution of vista29648
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Transcription factor that possibly regulate vista29648[chr19:47121981-47122214]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 47121855 47122271 RELA UCSC Txn Factor no Conserved 108417738
chr19 47121970 47122256 RUNX3 UCSC Txn Factor no Conserved 108417746
chr19 47121987 47121991 NFE TRANSFAC yes 70860408
chr19 47121987 47121991 NFE TRANSFAC yes 113586696
chr19 47121988 47121993 GATA2 JASPAR yes 70860409
chr19 47121988 47121993 GATA2 JASPAR yes 113586697
chr19 47121991 47121995 H1TF2 TRANSFAC yes 70860410
chr19 47121991 47121995 NFE TRANSFAC yes 70860411
chr19 47121991 47121995 SRF TRANSFAC yes 70860412
chr19 47121991 47121995 H1TF2 TRANSFAC yes 113586698
chr19 47121991 47121995 NFE TRANSFAC yes 113586699
chr19 47121991 47121995 SRF TRANSFAC yes 113586700
chr19 47121992 47122012 TP53 JASPAR yes 70860413
chr19 47121992 47122012 TP53 JASPAR yes 113586701
chr19 47121994 47122009 HSF1 JASPAR yes 70860414
chr19 47121994 47122009 HSF1 JASPAR yes 113586702
chr19 47121995 47122008 HSF1 JASPAR yes 70860415
chr19 47121995 47122008 HSF2 JASPAR yes 70860416
chr19 47121995 47122008 HSF4 JASPAR yes 70860417
chr19 47121995 47122008 HSF1 JASPAR yes 113586703
chr19 47121995 47122008 HSF2 JASPAR yes 113586704
chr19 47121995 47122008 HSF4 JASPAR yes 113586705
chr19 47122003 47122007 YY1 TRANSFAC yes 70860418
chr19 47122003 47122007 YY1 TRANSFAC yes 113586706
chr19 47122013 47122026 TFAP2A JASPAR yes 70860419
chr19 47122013 47122026 TFAP2A JASPAR yes 113586707
chr19 47122020 47122033 NFKB1 JASPAR yes 70860420
chr19 47122020 47122033 NFKB1 JASPAR yes 113586708
chr19 47122021 47122032 NFKB1 JASPAR yes 70860421
chr19 47122021 47122032 NFKB1 JASPAR yes 113586709
chr19 47122022 47122032 RELA JASPAR yes 70860422
chr19 47122022 47122032 RELA JASPAR yes 113586710
chr19 47122029 47122040 ESRRB JASPAR yes 70860423
chr19 47122029 47122040 ESRRB JASPAR yes 113586711
chr19 47122031 47122050 PAX5 JASPAR yes 70860424
chr19 47122031 47122050 PAX5 JASPAR yes 113586712
chr19 47122034 47122051 PAX1 JASPAR yes 70860425
chr19 47122034 47122051 PAX9 JASPAR yes 70860426
chr19 47122034 47122051 PAX1 JASPAR yes 113586713
chr19 47122034 47122051 PAX9 JASPAR yes 113586714
chr19 47122038 47122050 HNF1B JASPAR yes 70860427
chr19 47122038 47122050 HNF1B JASPAR yes 113586715
chr19 47122038 47122058 ESR1 JASPAR yes 70860428
chr19 47122038 47122058 ESR1 JASPAR yes 113586716
chr19 47122041 47122061 PPARG JASPAR yes 70860429
chr19 47122041 47122061 PPARG JASPAR yes 113586717
chr19 47122042 47122059 ESR1 JASPAR yes 70860430
chr19 47122042 47122059 ESR1 JASPAR yes 113586718
chr19 47122042 47122060 ESR1 JASPAR yes 70860431
chr19 47122042 47122060 ESR2 JASPAR yes 70860432
chr19 47122042 47122060 ESR1 JASPAR yes 113586719
chr19 47122042 47122060 ESR2 JASPAR yes 113586720
chr19 47122043 47122058 ESR2 JASPAR yes 70860433
chr19 47122043 47122058 ESR2 JASPAR yes 113586721
chr19 47122043 47122063 ESR1 JASPAR yes 70860434
chr19 47122043 47122063 ESR1 JASPAR yes 113586722
chr19 47122044 47122055 ESRRA JASPAR yes 70860435
chr19 47122044 47122055 ESRRB JASPAR yes 70860436
chr19 47122044 47122055 ESRRA JASPAR yes 113586723
chr19 47122044 47122055 ESRRB JASPAR yes 113586724
chr19 47122045 47122053 NR4A2 JASPAR yes 70860437
chr19 47122045 47122053 NR4A2 JASPAR yes 113586725
chr19 47122046 47122056 RORA JASPAR yes 70860438
chr19 47122046 47122056 RORA JASPAR yes 113586726
chr19 47122051 47122063 GRHL1 JASPAR yes 70860439
chr19 47122051 47122063 GRHL1 JASPAR yes 113586727
chr19 47122051 47122065 RORA JASPAR yes 70860440
chr19 47122051 47122065 RORA JASPAR yes 113586728
chr19 47122052 47122062 RORA JASPAR yes 70860441
chr19 47122052 47122062 RORA JASPAR yes 113586729
chr19 47122054 47122060 PTF TRANSFAC yes 70860442
chr19 47122054 47122060 PTF TRANSFAC yes 113586730
chr19 47122063 47122066 MYB TRANSFAC yes 70860443
chr19 47122063 47122066 MYB TRANSFAC yes 113586731
chr19 47122118 47122128 SP1 JASPAR yes 70860444
chr19 47122118 47122128 SP1 JASPAR yes 113586732
chr19 47122119 47122123 LFA1 TRANSFAC yes 70860445
chr19 47122119 47122123 LFA1 TRANSFAC yes 113586733
chr19 47122125 47122130 SP1 TRANSFAC yes 70860446
chr19 47122125 47122130 SP1 TRANSFAC yes 113586734
chr19 47122130 47122135 ETS2 TRANSFAC yes 70860447
chr19 47122130 47122135 ETS2 TRANSFAC yes 113586735
chr19 47122168 47122173 ETS2 TRANSFAC yes 70860448
chr19 47122168 47122173 ETS2 TRANSFAC yes 113586736
chr19 47122181 47122186 GATA1 TRANSFAC yes 70860449
chr19 47122181 47122186 GATA1 TRANSFAC yes 113586737
chr19 47122185 47122189 NFE TRANSFAC yes 70860450
chr19 47122185 47122189 NFE TRANSFAC yes 113586738
chr19 47122192 47122201 SRY JASPAR yes 70860451
chr19 47122192 47122201 SRY JASPAR yes 113586739
chr19 47122194 47122197 MYB TRANSFAC yes 70860452
chr19 47122194 47122197 MYB TRANSFAC yes 113586740
chr19 47122194 47122203 SOX9 JASPAR yes 70860453
chr19 47122194 47122203 SOX9 JASPAR yes 113586741
chr19 47122195 47122210 RFX5 JASPAR yes 70860454
chr19 47122195 47122210 RFX5 JASPAR yes 113586742
chr19 47122200 47122213 SCRT2 JASPAR yes 70860455
chr19 47122200 47122213 SCRT2 JASPAR yes 113586743
chr19 47122203 47122216 ZBTB18 JASPAR yes 70860456
chr19 47122203 47122216 ZBTB18 JASPAR yes 113586744
chr19 47122204 47122214 MSC JASPAR yes 70860457
chr19 47122204 47122214 NHLH1 JASPAR yes 70860458
chr19 47122204 47122214 MSC JASPAR yes 113586745
chr19 47122204 47122214 NHLH1 JASPAR yes 113586746
SNP sites on vista29648[chr19:47121981-47122214]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29648[chr19:47121981-47122214]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 46984053 47104457 - PPP5D1 ENSG00000230510.2 47104457 0.81 0.99 17733 82476
chr19 47050313 47104118 - AC011551.3 ENSG00000268423.1 47104118 0.78 0.87 17736 82137
chr19 47104331 47114050 + CALM3 ENSG00000160014.12 47104331 0.68 1.0 17737 82350
chr19 47123725 47128375 - PTGIR ENSG00000160013.4 47128375 0.9 0.96 17738 93839
chr19 47137333 47137942 - GNG8 ENSG00000167414.4 47137942 0.9 0.93 17739 84272
chr19 47150869 47164395 - DACT3 ENSG00000197380.6 47164395 0.87 0.99 17740 57819
chr19 47177532 47220384 - PRKD2 ENSG00000105287.8 47220384 0.69 1.0 17741 1830
Expression level of Genes
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miRNAs possibly regulated by vista29648[chr19:47121981-47122214]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results