EnhancerDB
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  3. vista29653[chr19:47253619-47253881]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29653[chr19:47253619-47253881]
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Tissue distribution of vista29653
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Transcription factor that possibly regulate vista29653[chr19:47253619-47253881]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 47253358 47253746 CTCF UCSC Txn Factor no Conserved 108417965
chr19 47253621 47253636 TFAP2A JASPAR yes 70860658
chr19 47253621 47253636 TFAP2C JASPAR yes 70860659
chr19 47253621 47253636 TFAP2A JASPAR yes 113592460
chr19 47253621 47253636 TFAP2C JASPAR yes 113592461
chr19 47253623 47253638 TFAP2A JASPAR yes 70860660
chr19 47253623 47253638 TFAP2C JASPAR yes 70860661
chr19 47253623 47253638 TFAP2A JASPAR yes 113592462
chr19 47253623 47253638 TFAP2C JASPAR yes 113592463
chr19 47253624 47253635 TFAP2A JASPAR yes 70860662
chr19 47253624 47253635 TFAP2B JASPAR yes 70860663
chr19 47253624 47253635 TFAP2A JASPAR yes 113592464
chr19 47253624 47253635 TFAP2B JASPAR yes 113592465
chr19 47253624 47253636 TFAP2A JASPAR yes 70860664
chr19 47253624 47253636 TFAP2A JASPAR yes 113592466
chr19 47253630 47253647 ESR1 JASPAR yes 70860665
chr19 47253630 47253647 ESR1 JASPAR yes 113592467
chr19 47253647 47253668 REST JASPAR yes 70860666
chr19 47253647 47253668 REST JASPAR yes 113592468
chr19 47253651 47253655 NFE TRANSFAC yes 70860667
chr19 47253651 47253655 NFE TRANSFAC yes 113592469
chr19 47253651 47253666 HNF4A JASPAR yes 70860668
chr19 47253651 47253666 HNF4A JASPAR yes 113592470
chr19 47253665 47253674 HIC2 JASPAR yes 70860669
chr19 47253665 47253674 HIC2 JASPAR yes 113592471
chr19 47253668 47253672 LFA1 TRANSFAC yes 70860670
chr19 47253668 47253672 LFA1 TRANSFAC yes 113592472
chr19 47253676 47253684 EHF JASPAR yes 70860671
chr19 47253676 47253684 EHF JASPAR yes 113592473
chr19 47253691 47253704 SMAD2 JASPAR yes 70860672
chr19 47253691 47253704 SMAD2 JASPAR yes 113592474
chr19 47253756 47253770 GATA2 JASPAR yes 70860673
chr19 47253756 47253770 GATA2 JASPAR yes 113592475
chr19 47253760 47253768 GATA3 JASPAR yes 70860674
chr19 47253760 47253768 GATA5 JASPAR yes 70860675
chr19 47253760 47253768 GATA3 JASPAR yes 113592476
chr19 47253760 47253768 GATA5 JASPAR yes 113592477
chr19 47253772 47253785 ZBTB18 JASPAR yes 70860676
chr19 47253772 47253785 ZBTB18 JASPAR yes 113592478
chr19 47253779 47253793 GATA2 JASPAR yes 70860677
chr19 47253779 47253793 GATA2 JASPAR yes 113592479
chr19 47253783 47253801 IRF2 JASPAR yes 70860678
chr19 47253783 47253801 IRF2 JASPAR yes 113592480
chr19 47253784 47253805 IRF1 JASPAR yes 70860679
chr19 47253784 47253805 IRF1 JASPAR yes 113592481
chr19 47253785 47253789 NFE TRANSFAC yes 70860680
chr19 47253785 47253789 NFE TRANSFAC yes 113592482
chr19 47253785 47253790 GATA1 TRANSFAC yes 70860681
chr19 47253785 47253790 GATA1 TRANSFAC yes 113592483
chr19 47253785 47253791 GATA3 JASPAR yes 70860682
chr19 47253785 47253791 GATA3 JASPAR yes 113592484
chr19 47253786 47253801 STAT2 JASPAR yes 70860683
chr19 47253786 47253801 STAT2 JASPAR yes 113592485
chr19 47253787 47253801 STAT1 JASPAR yes 70860684
chr19 47253787 47253801 STAT1 JASPAR yes 113592486
chr19 47253788 47253800 IRF1 JASPAR yes 70860685
chr19 47253788 47253800 IRF1 JASPAR yes 113592487
chr19 47253788 47253802 IRF7 JASPAR yes 70860686
chr19 47253788 47253802 IRF8 JASPAR yes 70860687
chr19 47253788 47253802 IRF7 JASPAR yes 113592488
chr19 47253788 47253802 IRF8 JASPAR yes 113592489
chr19 47253788 47253803 IRF9 JASPAR yes 70860688
chr19 47253788 47253803 IRF9 JASPAR yes 113592490
chr19 47253808 47253827 PAX5 JASPAR yes 70860689
chr19 47253808 47253827 PAX5 JASPAR yes 113592491
chr19 47253816 47253820 NFE TRANSFAC yes 70860690
chr19 47253816 47253820 NFE TRANSFAC yes 113592492
chr19 47253840 47253851 NFE2L2 JASPAR yes 70860691
chr19 47253840 47253851 NFE2L2 JASPAR yes 113592493
chr19 47253841 47253852 JUND JASPAR yes 70860692
chr19 47253841 47253852 JUND JASPAR yes 113592494
chr19 47253843 47253849 JUN TRANSFAC yes 70860693
chr19 47253843 47253849 JUN TRANSFAC yes 113592495
chr19 47253853 47253874 ZNF263 JASPAR yes 70860694
chr19 47253853 47253874 ZNF263 JASPAR yes 113592496
chr19 47253861 47253880 CTCF JASPAR yes 70860695
chr19 47253861 47253880 CTCF JASPAR yes 113592497
chr19 47253876 47253887 EBF1 JASPAR yes 70860696
chr19 47253876 47253887 EBF1 JASPAR yes 113592498
SNP sites on vista29653[chr19:47253619-47253881]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29653[chr19:47253619-47253881]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 47150869 47164395 - DACT3 ENSG00000197380.6 47164395 0.87 0.99 17740 10776
chr19 47177532 47220384 - PRKD2 ENSG00000105287.8 47220384 0.69 1.0 17741 66765
chr19 47222764 47250251 - STRN4 ENSG00000090372.10 47250251 0.61 1.0 17742 96632
chr19 47249303 47280245 + FKRP ENSG00000181027.6 47249303 0.67 1.0 17743 95684
chr19 47278140 47291851 - SLC1A5 ENSG00000105281.8 47291851 0.68 1.0 17744 62030
Expression level of Genes
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miRNAs possibly regulated by vista29653[chr19:47253619-47253881]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results