EnhancerDB
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  3. vista29655[chr19:47295326-47295559]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29655[chr19:47295326-47295559]
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Tissue distribution of vista29655
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Transcription factor that possibly regulate vista29655[chr19:47295326-47295559]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 47295224 47295898 GATA2 UCSC Txn Factor no Conserved 108418006
chr19 47295245 47295629 MYC UCSC Txn Factor no Conserved 108418008
chr19 47295253 47295922 GATA3 UCSC Txn Factor no Conserved 108418011
chr19 47295315 47295591 MAX UCSC Txn Factor no Conserved 108418017
chr19 47295323 47295334 CDX2 JASPAR yes 70860814
chr19 47295323 47295334 CDX2 JASPAR yes 113596034
chr19 47295325 47295334 CDX1 JASPAR yes 70860815
chr19 47295325 47295334 CDX1 JASPAR yes 113596035
chr19 47295339 47295343 NFE TRANSFAC yes 70860816
chr19 47295339 47295343 NFE TRANSFAC yes 113596036
chr19 47295360 47295381 IRF1 JASPAR yes 70860817
chr19 47295360 47295381 IRF1 JASPAR yes 113596037
chr19 47295363 47295377 IRF7 JASPAR yes 70860818
chr19 47295363 47295377 IRF7 JASPAR yes 113596038
chr19 47295364 47295379 STAT2 JASPAR yes 70860819
chr19 47295364 47295379 STAT2 JASPAR yes 113596039
chr19 47295365 47295377 IRF1 JASPAR yes 70860820
chr19 47295365 47295377 IRF1 JASPAR yes 113596040
chr19 47295404 47295423 CTCF JASPAR yes 70860821
chr19 47295404 47295423 CTCF JASPAR yes 113596041
chr19 47295413 47295424 FLI1 JASPAR yes 70860822
chr19 47295413 47295424 FLI1 JASPAR yes 113596042
chr19 47295414 47295419 ETS2 TRANSFAC yes 70860823
chr19 47295414 47295419 ETS2 TRANSFAC yes 113596043
chr19 47295414 47295422 FEV JASPAR yes 70860824
chr19 47295414 47295422 FEV JASPAR yes 113596044
chr19 47295415 47295422 SPI1 JASPAR yes 70860825
chr19 47295415 47295422 SPI1 JASPAR yes 113596045
chr19 47295442 47295456 GATA2 JASPAR yes 70860826
chr19 47295442 47295456 GATA2 JASPAR yes 113596046
chr19 47295444 47295452 GATA3 JASPAR yes 70860827
chr19 47295444 47295452 GATA5 JASPAR yes 70860828
chr19 47295444 47295452 GATA3 JASPAR yes 113596047
chr19 47295444 47295452 GATA5 JASPAR yes 113596048
chr19 47295471 47295479 FOXO3 JASPAR yes 70860829
chr19 47295471 47295479 FOXO3 JASPAR yes 113596049
chr19 47295479 47295485 TCF1 TRANSFAC yes 70860830
chr19 47295479 47295485 TCF1 TRANSFAC yes 113596050
chr19 47295486 47295496 HEY2 JASPAR yes 70860831
chr19 47295486 47295496 HEY2 JASPAR yes 113596051
chr19 47295497 47295509 TFAP2A JASPAR yes 70860832
chr19 47295497 47295509 TFAP2B JASPAR yes 70860833
chr19 47295497 47295509 TFAP2C JASPAR yes 70860834
chr19 47295497 47295509 TFAP2A JASPAR yes 113596052
chr19 47295497 47295509 TFAP2B JASPAR yes 113596053
chr19 47295497 47295509 TFAP2C JASPAR yes 113596054
chr19 47295497 47295512 TFAP2A JASPAR yes 70860835
chr19 47295497 47295512 TFAP2C JASPAR yes 70860836
chr19 47295497 47295512 TFAP2A JASPAR yes 113596055
chr19 47295497 47295512 TFAP2C JASPAR yes 113596056
chr19 47295498 47295509 TFAP2A JASPAR yes 70860837
chr19 47295498 47295509 TFAP2A JASPAR yes 113596057
chr19 47295555 47295560 GATA2 JASPAR yes 70860838
chr19 47295555 47295560 GATA2 JASPAR yes 113596058
chr19 47295557 47295563 MZF1 JASPAR yes 70860839
chr19 47295557 47295563 MZF1 JASPAR yes 113596059
SNP sites on vista29655[chr19:47295326-47295559]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29655[chr19:47295326-47295559]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 47177532 47220384 - PRKD2 ENSG00000105287.8 47220384 0.69 1.0 17741 25058
chr19 47222764 47250251 - STRN4 ENSG00000090372.10 47250251 0.61 1.0 17742 54925
chr19 47249303 47280245 + FKRP ENSG00000181027.6 47249303 0.67 1.0 17743 53977
chr19 47278140 47291851 - SLC1A5 ENSG00000105281.8 47291851 0.68 1.0 17744 96525
chr19 47341393 47354249 - AP2S1 ENSG00000042753.7 47354249 0.6 1.0 17745 41310
Expression level of Genes
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miRNAs possibly regulated by vista29655[chr19:47295326-47295559]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results