EnhancerDB
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  3. vista29659[chr19:47367294-47367354]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29659[chr19:47367294-47367354]
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Tissue distribution of vista29659
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Transcription factor that possibly regulate vista29659[chr19:47367294-47367354]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 47367054 47367524 GATA3 UCSC Txn Factor no Conserved 108418330
chr19 47367139 47367444 TFAP2C UCSC Txn Factor no Conserved 108418335
chr19 47367282 47367297 TFAP2A JASPAR yes 70861267
chr19 47367282 47367297 TFAP2C JASPAR yes 70861268
chr19 47367282 47367297 TFAP2A JASPAR yes 113604591
chr19 47367282 47367297 TFAP2C JASPAR yes 113604592
chr19 47367285 47367297 TFAP2A JASPAR yes 70861269
chr19 47367285 47367297 TFAP2B JASPAR yes 70861270
chr19 47367285 47367297 TFAP2C JASPAR yes 70861271
chr19 47367285 47367297 TFAP2A JASPAR yes 113604593
chr19 47367285 47367297 TFAP2B JASPAR yes 113604594
chr19 47367285 47367297 TFAP2C JASPAR yes 113604595
chr19 47367289 47367298 THAP1 JASPAR yes 70861272
chr19 47367289 47367298 THAP1 JASPAR yes 113604596
chr19 47367292 47367296 LFA1 TRANSFAC yes 70861273
chr19 47367292 47367296 LFA1 TRANSFAC yes 113604597
chr19 47367331 47367351 RREB1 JASPAR yes 70861274
chr19 47367331 47367351 RREB1 JASPAR yes 113604598
chr19 47367333 47367353 RREB1 JASPAR yes 70861275
chr19 47367333 47367353 RREB1 JASPAR yes 113604599
chr19 47367337 47367352 RUNX2 JASPAR yes 70861276
chr19 47367337 47367352 RUNX2 JASPAR yes 113604600
chr19 47367347 47367352 SP1 TRANSFAC yes 70861277
chr19 47367347 47367352 SP1 TRANSFAC yes 113604601
SNP sites on vista29659[chr19:47367294-47367354]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29659[chr19:47367294-47367354]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 47278140 47291851 - SLC1A5 ENSG00000105281.8 47291851 0.68 1.0 17744 24557
chr19 47341393 47354249 - AP2S1 ENSG00000042753.7 47354249 0.6 1.0 17745 86955
chr19 47421933 47508334 + ARHGAP35 ENSG00000160007.13 47421933 0.68 1.0 17746 45421
Expression level of Genes
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miRNAs possibly regulated by vista29659[chr19:47367294-47367354]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results